RNA–Protein interactions for RNA: ENST00000629716.2

LINC01515-220, Transcript of long intergenic non-protein coding RNA 1515, humanhuman

TSL 5

Gene LINC01515, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01515-220ENST00000629716 KDM6AO15550 1401 aaPredicted RBP12.3□□□□□ -0.44
LINC01515-220ENST00000629716 MARCH10Q8NA82 808 aaPredicted RBP12.3□□□□□ -0.44
LINC01515-220ENST00000629716 CHMP4AQ9BY43 222 aa12.3□□□□□ -0.44
LINC01515-220ENST00000629716 TMOD3Q9NYL9 352 aa12.3□□□□□ -0.44
LINC01515-220ENST00000629716 HRO43593 1189 aa12.29□□□□□ -0.44
LINC01515-220ENST00000629716 RXRBP28702 533 aa12.29□□□□□ -0.44
LINC01515-220ENST00000629716 TWISTNBQ3B726 338 aaPredicted RBP12.29□□□□□ -0.44
LINC01515-220ENST00000629716 TTC5Q8N0Z6 440 aa12.29□□□□□ -0.44
LINC01515-220ENST00000629716 ZNF428Q96B54 188 aa12.29□□□□□ -0.44
LINC01515-220ENST00000629716 ELL2O00472 640 aaPredicted RBP12.28□□□□□ -0.44
LINC01515-220ENST00000629716 SYTL4Q96C24 671 aaPredicted RBP12.28□□□□□ -0.44
LINC01515-220ENST00000629716 SUPT16HQ9Y5B9 1047 aaKnown RBP12.28□□□□□ -0.44
LINC01515-220ENST00000629716 SOS1Q07889 1333 aaPredicted RBP12.28□□□□□ -0.44
LINC01515-220ENST00000629716 WNK3Q9BYP7 1800 aa12.27□□□□□ -0.44
LINC01515-220ENST00000629716 GLI3P10071 1580 aa12.27□□□□□ -0.44
LINC01515-220ENST00000629716 LRRC37A3O60309 1634 aa12.27□□□□□ -0.44
LINC01515-220ENST00000629716 NEFLP07196 543 aa12.27□□□□□ -0.45
LINC01515-220ENST00000629716 PRIM1P49642 420 aaKnown RBP12.27□□□□□ -0.45
LINC01515-220ENST00000629716 ZNF790Q6PG37 636 aa12.27□□□□□ -0.45
LINC01515-220ENST00000629716 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.27□□□□□ -0.45
LINC01515-220ENST00000629716 C8orf58Q8NAV2 365 aa12.27□□□□□ -0.45
LINC01515-220ENST00000629716 VAMP4O75379 141 aa12.26□□□□□ -0.45
LINC01515-220ENST00000629716 EIF4A1P60842 406 aaKnown RBP12.26□□□□□ -0.45
LINC01515-220ENST00000629716 SLC39A6Q13433 755 aa12.26□□□□□ -0.45
LINC01515-220ENST00000629716 PPP1R15BQ5SWA1 713 aa12.26□□□□□ -0.45
LINC01515-220ENST00000629716 TSPYL6Q8N831 410 aa12.26□□□□□ -0.45
LINC01515-220ENST00000629716 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC01515-220ENST00000629716 HCSTQ9UBK5 93 aa12.26□□□□□ -0.45
LINC01515-220ENST00000629716 MRC1P22897 1456 aa12.26□□□□□ -0.45
LINC01515-220ENST00000629716 ADAMTS7Q9UKP4 1686 aa12.26□□□□□ -0.45
LINC01515-220ENST00000629716 SCN11AQ9UI33 1791 aa12.25□□□□□ -0.45
LINC01515-220ENST00000629716 KCNQ3O43525 872 aa12.25□□□□□ -0.45
LINC01515-220ENST00000629716 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
LINC01515-220ENST00000629716 RARSP54136 660 aaKnown RBP12.25□□□□□ -0.45
LINC01515-220ENST00000629716 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
LINC01515-220ENST00000629716 KRT27Q7Z3Y8 459 aa12.25□□□□□ -0.45
LINC01515-220ENST00000629716 PIGBQ92521 554 aa12.25□□□□□ -0.45
LINC01515-220ENST00000629716 ACSBG1Q96GR2 724 aa12.25□□□□□ -0.45
LINC01515-220ENST00000629716 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
LINC01515-220ENST00000629716 SMC4Q9NTJ3 1288 aa12.25□□□□□ -0.45
LINC01515-220ENST00000629716 HOXB7P09629 217 aa12.24□□□□□ -0.45
LINC01515-220ENST00000629716 CANXP27824 592 aaKnown RBP12.24□□□□□ -0.45
LINC01515-220ENST00000629716 KRT24Q2M2I5 525 aa12.24□□□□□ -0.45
LINC01515-220ENST00000629716 CCDC30Q5VVM6 783 aa12.24□□□□□ -0.45
LINC01515-220ENST00000629716 SHANK3Q9BYB0 1731 aa12.24□□□□□ -0.45
LINC01515-220ENST00000629716 THSD7AQ9UPZ6 1657 aa12.24□□□□□ -0.45
LINC01515-220ENST00000629716 PDE4AP27815 886 aa12.23□□□□□ -0.45
LINC01515-220ENST00000629716 POTEAQ6S8J7 498 aa12.23□□□□□ -0.45
LINC01515-220ENST00000629716 FAM196AQ6ZSG2 479 aa12.23□□□□□ -0.45
LINC01515-220ENST00000629716 STK31Q9BXU1 1019 aa12.23□□□□□ -0.45
LINC01515-220ENST00000629716 RGS17Q9UGC6 210 aaPredicted RBP12.23□□□□□ -0.45
LINC01515-220ENST00000629716 BCL9O00512 1426 aa12.22□□□□□ -0.45
LINC01515-220ENST00000629716 IPO8O15397 1037 aaKnown RBP12.22□□□□□ -0.45
LINC01515-220ENST00000629716 PTCD1O75127 700 aaKnown RBP12.22□□□□□ -0.45
LINC01515-220ENST00000629716 GIGYF1O75420 1035 aaPredicted RBP12.22□□□□□ -0.45
LINC01515-220ENST00000629716 BCAR3O75815 825 aa12.22□□□□□ -0.45
LINC01515-220ENST00000629716 SNRPA1P09661 255 aaKnown RBP12.22□□□□□ -0.45
LINC01515-220ENST00000629716 EIF2S2P20042 333 aaKnown RBP12.22□□□□□ -0.45
LINC01515-220ENST00000629716 RRP1P56182 461 aaKnown RBP12.22□□□□□ -0.45
LINC01515-220ENST00000629716 HDGFL1Q5TGJ6 251 aa12.22□□□□□ -0.45
LINC01515-220ENST00000629716 SSH1Q8WYL5 1049 aa12.22□□□□□ -0.45
LINC01515-220ENST00000629716 SMARCC1Q92922 1105 aaPredicted RBP12.22□□□□□ -0.45
LINC01515-220ENST00000629716 ZNF496Q96IT1 587 aaPredicted RBP12.22□□□□□ -0.45
LINC01515-220ENST00000629716 KCNK17Q96T54 332 aa12.22□□□□□ -0.45
LINC01515-220ENST00000629716 BCL2L13Q9BXK5 485 aa12.22□□□□□ -0.45
LINC01515-220ENST00000629716 FAM182BQ5T319 152 aa12.21□□□□□ -0.45
LINC01515-220ENST00000629716 FRAT1Q92837 279 aaPredicted RBP12.21□□□□□ -0.45
LINC01515-220ENST00000629716 TEX13AQ9BXU3 409 aaPredicted RBP12.21□□□□□ -0.45
LINC01515-220ENST00000629716 ATG3Q9NT62 314 aa12.21□□□□□ -0.45
LINC01515-220ENST00000629716 ASAP1Q9ULH1 1129 aa12.21□□□□□ -0.45
LINC01515-220ENST00000629716 RNF123Q5XPI4 1314 aa12.2□□□□□ -0.46
LINC01515-220ENST00000629716 KIF16BQ96L93 1317 aa12.2□□□□□ -0.46
LINC01515-220ENST00000629716 TCERG1O14776 1098 aaKnown RBP12.2□□□□□ -0.46
LINC01515-220ENST00000629716 MS4A1P11836 297 aa12.2□□□□□ -0.46
LINC01515-220ENST00000629716 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
LINC01515-220ENST00000629716 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
LINC01515-220ENST00000629716 HEG1Q9ULI3 1381 aa12.19□□□□□ -0.46
LINC01515-220ENST00000629716 VIRMAQ69YN4 1812 aaKnown RBP12.19□□□□□ -0.46
LINC01515-220ENST00000629716 KCNQ2O43526 872 aa12.19□□□□□ -0.46
LINC01515-220ENST00000629716 BRPF1P55201 1214 aaPredicted RBP12.19□□□□□ -0.46
LINC01515-220ENST00000629716 ZKSCAN2Q63HK3 967 aa12.19□□□□□ -0.46
LINC01515-220ENST00000629716 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
LINC01515-220ENST00000629716 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
LINC01515-220ENST00000629716 ZNF454Q8N9F8 522 aa12.19□□□□□ -0.46
LINC01515-220ENST00000629716 SIPA1L3O60292 1781 aaPredicted RBP12.19□□□□□ -0.46
LINC01515-220ENST00000629716 KDM3BQ7LBC6 1761 aa12.19□□□□□ -0.46
LINC01515-220ENST00000629716 PLIN1O60240 522 aa12.18□□□□□ -0.46
LINC01515-220ENST00000629716 ANO8Q9HCE9 1232 aaPredicted RBP12.18□□□□□ -0.46
LINC01515-220ENST00000629716 PLA2G2EQ9NZK7 142 aa12.18□□□□□ -0.46
LINC01515-220ENST00000629716 DBF4Q9UBU7 674 aaPredicted RBP12.18□□□□□ -0.46
LINC01515-220ENST00000629716 NOB1Q9ULX3 412 aaKnown RBP12.18□□□□□ -0.46
LINC01515-220ENST00000629716 TOGARAM1Q9Y4F4 1720 aa12.17□□□□□ -0.46
LINC01515-220ENST00000629716 STARD3NLO95772 234 aa12.17□□□□□ -0.46
LINC01515-220ENST00000629716 FOSBP53539 338 aa12.17□□□□□ -0.46
LINC01515-220ENST00000629716 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
LINC01515-220ENST00000629716 VPS9D1Q9Y2B5 631 aa12.17□□□□□ -0.46
LINC01515-220ENST00000629716 DOT1LQ8TEK3 1739 aa12.17□□□□□ -0.46
LINC01515-220ENST00000629716 PRAMEF22A3QJZ6 481 aa12.16□□□□□ -0.46
LINC01515-220ENST00000629716 PDE3AQ14432 1141 aa12.16□□□□□ -0.46
LINC01515-220ENST00000629716 ARHGAP45Q92619 1136 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms