RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 PHAXQ9H814 394 aaKnown RBP12.72□□□□□ -0.37
FOXCUT-201ENST00000628509 CCDC87Q9NVE4 849 aa12.72□□□□□ -0.37
FOXCUT-201ENST00000628509 MAP3K2Q9Y2U5 619 aa12.72□□□□□ -0.37
FOXCUT-201ENST00000628509 ZBTB7BO15156 539 aaPredicted RBP12.71□□□□□ -0.37
FOXCUT-201ENST00000628509 GNAI2P04899 355 aa12.71□□□□□ -0.37
FOXCUT-201ENST00000628509 UBTFL1P0CB47 393 aaPredicted RBP12.71□□□□□ -0.37
FOXCUT-201ENST00000628509 CYP19A1P11511 503 aaPredicted RBP12.71□□□□□ -0.37
FOXCUT-201ENST00000628509 PDIA6Q15084 440 aa12.71□□□□□ -0.37
FOXCUT-201ENST00000628509 RC3H1Q5TC82 1133 aaKnown RBP12.71□□□□□ -0.37
FOXCUT-201ENST00000628509 G2E3Q7L622 706 aa12.71□□□□□ -0.37
FOXCUT-201ENST00000628509 METTL22Q9BUU2 404 aaPredicted RBP12.71□□□□□ -0.37
FOXCUT-201ENST00000628509 ZBTB40Q9NUA8 1239 aa12.71□□□□□ -0.37
FOXCUT-201ENST00000628509 C9orf78Q9NZ63 289 aaPredicted RBP12.71□□□□□ -0.37
FOXCUT-201ENST00000628509 ZNF652Q9Y2D9 606 aa12.71□□□□□ -0.37
FOXCUT-201ENST00000628509 BTAF1O14981 1849 aa12.71□□□□□ -0.38
FOXCUT-201ENST00000628509 SBF2Q86WG5 1849 aa12.71□□□□□ -0.38
FOXCUT-201ENST00000628509 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
FOXCUT-201ENST00000628509 CNTNAP4Q9C0A0 1308 aa12.69□□□□□ -0.38
FOXCUT-201ENST00000628509 PRAMEF22A3QJZ6 481 aa12.69□□□□□ -0.38
FOXCUT-201ENST00000628509 ERVV-1B6SEH8 477 aa12.69□□□□□ -0.38
FOXCUT-201ENST00000628509 KCNQ2O43526 872 aa12.69□□□□□ -0.38
FOXCUT-201ENST00000628509 SF3B2Q13435 895 aaKnown RBP12.69□□□□□ -0.38
FOXCUT-201ENST00000628509 HDAC1Q13547 482 aaPredicted RBP12.69□□□□□ -0.38
FOXCUT-201ENST00000628509 B4GALNT3Q6L9W6 998 aa12.69□□□□□ -0.38
FOXCUT-201ENST00000628509 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
FOXCUT-201ENST00000628509 BRWD3Q6RI45 1802 aa12.69□□□□□ -0.38
FOXCUT-201ENST00000628509 F6X3S4 739 aa12.68□□□□□ -0.38
FOXCUT-201ENST00000628509 A1BGP04217 495 aa12.68□□□□□ -0.38
FOXCUT-201ENST00000628509 BEND3Q5T5X7 828 aa12.68□□□□□ -0.38
FOXCUT-201ENST00000628509 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
FOXCUT-201ENST00000628509 ARXQ96QS3 562 aa12.68□□□□□ -0.38
FOXCUT-201ENST00000628509 MAP3K15Q6ZN16 1313 aa12.67□□□□□ -0.38
FOXCUT-201ENST00000628509 ANXA1P04083 346 aa12.67□□□□□ -0.38
FOXCUT-201ENST00000628509 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
FOXCUT-201ENST00000628509 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
FOXCUT-201ENST00000628509 CCDC191Q8NCU4 936 aa12.67□□□□□ -0.38
FOXCUT-201ENST00000628509 TJP1Q07157 1748 aa12.67□□□□□ -0.38
FOXCUT-201ENST00000628509 ADCY9O60503 1353 aa12.67□□□□□ -0.38
FOXCUT-201ENST00000628509 LY75O60449 1722 aa12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 GRM8O00222 908 aa12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 PLSCR1O15162 318 aa12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 HSP90AB4PQ58FF6 505 aa12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 NBPF14Q5TI25 921 aa12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 DZIP3Q86Y13 1208 aaKnown RBP12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 NBPF15Q8N660 670 aa12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 AK7Q96M32 723 aa12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 MYD88Q99836 296 aa12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 CWC25Q9NXE8 425 aaPredicted RBP12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 RTCBQ9Y3I0 505 aaKnown RBP12.66□□□□□ -0.38
FOXCUT-201ENST00000628509 TRIM37O94972 964 aa12.65□□□□□ -0.38
FOXCUT-201ENST00000628509 TCIRG1Q13488 830 aa12.65□□□□□ -0.38
FOXCUT-201ENST00000628509 CLEC4GQ6UXB4 293 aa12.65□□□□□ -0.38
FOXCUT-201ENST00000628509 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.38
FOXCUT-201ENST00000628509 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
FOXCUT-201ENST00000628509 TNNQ9UQP3 1299 aa12.65□□□□□ -0.38
FOXCUT-201ENST00000628509 ARFGEF2Q9Y6D5 1785 aa12.65□□□□□ -0.38
FOXCUT-201ENST00000628509 COL5A3P25940 1745 aaPredicted RBP12.65□□□□□ -0.38
FOXCUT-201ENST00000628509 ZPR1O75312 459 aa12.64□□□□□ -0.39
FOXCUT-201ENST00000628509 RPS6KA4O75676 772 aa12.64□□□□□ -0.39
FOXCUT-201ENST00000628509 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
FOXCUT-201ENST00000628509 TRIM28Q13263 835 aaKnown RBP12.64□□□□□ -0.39
FOXCUT-201ENST00000628509 PARP10Q53GL7 1025 aa12.64□□□□□ -0.39
FOXCUT-201ENST00000628509 LRP10Q7Z4F1 713 aa12.64□□□□□ -0.39
FOXCUT-201ENST00000628509 CCDC125Q86Z20 511 aa12.64□□□□□ -0.39
FOXCUT-201ENST00000628509 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
FOXCUT-201ENST00000628509 ANKRD44Q8N8A2 993 aa12.64□□□□□ -0.39
FOXCUT-201ENST00000628509 FLAD1Q8NFF5 587 aa12.64□□□□□ -0.39
FOXCUT-201ENST00000628509 ZBTB1Q9Y2K1 713 aa12.64□□□□□ -0.39
FOXCUT-201ENST00000628509 RREB1Q92766 1687 aa12.64□□□□□ -0.39
FOXCUT-201ENST00000628509 NEURL1BA8MQ27 555 aa12.63□□□□□ -0.39
FOXCUT-201ENST00000628509 ZBTB22O15209 634 aa12.63□□□□□ -0.39
FOXCUT-201ENST00000628509 APBA3O96018 575 aa12.63□□□□□ -0.39
FOXCUT-201ENST00000628509 GCKRQ14397 625 aa12.63□□□□□ -0.39
FOXCUT-201ENST00000628509 FAM182BQ5T319 152 aa12.63□□□□□ -0.39
FOXCUT-201ENST00000628509 MEIS3Q99687 375 aa12.63□□□□□ -0.39
FOXCUT-201ENST00000628509 USP44Q9H0E7 712 aa12.63□□□□□ -0.39
FOXCUT-201ENST00000628509 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
FOXCUT-201ENST00000628509 COL15A1P39059 1388 aa12.63□□□□□ -0.39
FOXCUT-201ENST00000628509 RGPD3A6NKT7 1758 aaPredicted RBP12.63□□□□□ -0.39
FOXCUT-201ENST00000628509 RGPD4Q7Z3J3 1758 aa12.63□□□□□ -0.39
FOXCUT-201ENST00000628509 UTYO14607 1347 aa12.62□□□□□ -0.39
FOXCUT-201ENST00000628509 AFDNP55196 1824 aaKnown RBP12.62□□□□□ -0.39
FOXCUT-201ENST00000628509 ITPK1Q13572 414 aa12.62□□□□□ -0.39
FOXCUT-201ENST00000628509 INTS5Q6P9B9 1019 aaKnown RBP12.62□□□□□ -0.39
FOXCUT-201ENST00000628509 POTEAQ6S8J7 498 aa12.62□□□□□ -0.39
FOXCUT-201ENST00000628509 PPP1R42Q7Z4L9 355 aa12.62□□□□□ -0.39
FOXCUT-201ENST00000628509 SLC4A9Q96Q91 983 aa12.62□□□□□ -0.39
FOXCUT-201ENST00000628509 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
FOXCUT-201ENST00000628509 RFC4P35249 363 aa12.61□□□□□ -0.39
FOXCUT-201ENST00000628509 BAG6P46379 1132 aa12.61□□□□□ -0.39
FOXCUT-201ENST00000628509 ATP8B2P98198 1209 aa12.61□□□□□ -0.39
FOXCUT-201ENST00000628509 TRAPPC3LQ5T215 181 aa12.61□□□□□ -0.39
FOXCUT-201ENST00000628509 RGS17Q9UGC6 210 aaPredicted RBP12.61□□□□□ -0.39
FOXCUT-201ENST00000628509 PCDHB15Q9Y5E8 787 aa12.61□□□□□ -0.39
FOXCUT-201ENST00000628509 NUP188Q5SRE5 1749 aa12.61□□□□□ -0.39
FOXCUT-201ENST00000628509 KDM2BQ8NHM5 1336 aa12.61□□□□□ -0.39
FOXCUT-201ENST00000628509 GNPATO15228 680 aa12.6□□□□□ -0.39
FOXCUT-201ENST00000628509 SSFA2P28290 1259 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms