RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 RAB27AP51159 221 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 SLC8A3P57103 927 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 ST5P78524 1137 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 SLFN5Q08AF3 891 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 SFSWAPQ12872 951 aaKnown RBP2.24□□□□□ -2.05
TCF4-264ENST00000628391 TMED1Q13445 227 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 PDIA5Q14554 519 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 TPD52L1Q16890 204 aaPredicted RBP2.24□□□□□ -2.05
TCF4-264ENST00000628391 FILIP1LQ4L180 1135 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 CCDC158Q5M9N0 1113 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 ANKRD45Q5TZF3 282 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 RCSD1Q6JBY9 416 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 KCNV1Q6PIU1 500 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 CPLX2Q6PUV4 134 aaKnown RBP2.24□□□□□ -2.05
TCF4-264ENST00000628391 NYAP1Q6ZVC0 841 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 KIAA1328Q86T90 577 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 CADPS2Q86UW7 1296 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 REXO1L1PQ8IX06 675 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 TRMT2AQ8IZ69 625 aaKnown RBP2.24□□□□□ -2.05
TCF4-264ENST00000628391 CEP112Q8N8E3 955 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 TMEM87AQ8NBN3 555 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 ACRBPQ8NEB7 543 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 ARMC2Q8NEN0 867 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 BICD2Q8TD16 824 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 ZNF483Q8TF39 744 aaPredicted RBP2.24□□□□□ -2.05
TCF4-264ENST00000628391 L3MBTL2Q969R5 705 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 THOC1Q96FV9 657 aaKnown RBP2.24□□□□□ -2.05
TCF4-264ENST00000628391 CABS1Q96KC9 395 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 ZNF396Q96N95 335 aaPredicted RBP2.24□□□□□ -2.05
TCF4-264ENST00000628391 CRACR2AQ9BSW2 395 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 SRRTQ9BXP5 876 aaKnown RBP2.24□□□□□ -2.05
TCF4-264ENST00000628391 L2HGDHQ9H9P8 463 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 GOPCQ9HD26 462 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 HOMER3Q9NSC5 361 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 PDRG1Q9NUG6 133 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 IFT57Q9NWB7 429 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 BLOC1S6Q9UL45 172 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 MYO6Q9UM54 1294 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 ZNF232Q9UNY5 417 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 PHF8Q9UPP1 1060 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 FANCAO15360 1455 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 CUL7Q14999 1698 aa2.24□□□□□ -2.05
TCF4-264ENST00000628391 POLR3AO14802 1390 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 ADGRB2O60241 1585 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 HECW2Q9P2P5 1572 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 TTC41PQ6P2S7 1318 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 PHLPP2Q6ZVD8 1323 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 SYNRGQ9UMZ2 1314 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 KIAA0586Q9BVV6 1533 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 IQGAP1P46940 1657 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 MED14O60244 1454 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 ADGRL1O94910 1474 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 PZPP20742 1482 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 FANCD2Q9BXW9 1451 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 ERC2O15083 957 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 CHUKO15111 745 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 POLR3GO15318 223 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 AHCYL1O43865 530 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 RTN2O75298 545 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 PRPF40AO75400 957 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 AP1G2O75843 785 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 CD2BP2O95400 341 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 TBC1D8O95759 1140 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 FAM163BP0C2L3 166 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 RLBP1P12271 317 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 HCLS1P14317 486 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 PECAM1P16284 738 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 CASTP20810 708 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 PTGS1P23219 599 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 HNRNPH1P31943 449 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 KCNJ6P48051 423 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 CCNHP51946 323 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 NAP1L1P55209 391 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 SCRN1Q12765 414 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 PSMD2Q13200 908 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 DHX8Q14562 1220 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 RASA3Q14644 834 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 SMC1AQ14683 1233 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 NAA30Q147X3 362 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 IQCB1Q15051 598 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 WDR43Q15061 677 aaKnown RBP eCLIP2.23□□□□□ -2.05
TCF4-264ENST00000628391 PLCB4Q15147 1175 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 SF3A1Q15459 793 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 PTPN14Q15678 1187 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 TBC1D25Q3MII6 688 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 FOXD4L6Q3SYB3 417 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 ARHGAP29Q52LW3 1261 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 BMP2KLQ5H9B9 411 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 WLSQ5T9L3 541 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 SPTY2D1Q68D10 685 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 CDCA2Q69YH5 1023 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 ZSCAN25Q6NSZ9 544 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 CC2D1AQ6P1N0 951 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 FOXD4L3Q6VB84 417 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 SPATA21Q7Z572 469 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 SDCCAG8Q86SQ7 713 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 IQCA1Q86XH1 822 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 MFN1Q8IWA4 741 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 WDR63Q8IWG1 891 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 AMOTL1Q8IY63 956 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms