RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 USP42Q9H9J4 1324 aaKnown RBP24.47■■□□□ 1.51
CNOT9-209ENST00000627282 MMP10P09238 476 aa24.46■■□□□ 1.51
CNOT9-209ENST00000627282 DBF4Q9UBU7 674 aaPredicted RBP24.46■■□□□ 1.51
CNOT9-209ENST00000627282 NLGN2Q8NFZ4 835 aa24.46■■□□□ 1.51
CNOT9-209ENST00000627282 SRP68Q9UHB9 627 aaKnown RBP24.46■■□□□ 1.51
CNOT9-209ENST00000627282 CD2APQ9Y5K6 639 aa24.46■■□□□ 1.51
CNOT9-209ENST00000627282 CHMP4AQ9BY43 222 aa24.44■■□□□ 1.5
CNOT9-209ENST00000627282 B4GALNT3Q6L9W6 998 aa24.43■■□□□ 1.5
CNOT9-209ENST00000627282 CT47B1P0C2W7 299 aaPredicted RBP24.42■■□□□ 1.5
CNOT9-209ENST00000627282 TBC1D2BQ9UPU7 963 aa24.42■■□□□ 1.5
CNOT9-209ENST00000627282 ZPR1O75312 459 aa24.41■■□□□ 1.5
CNOT9-209ENST00000627282 TTLL7Q6ZT98 887 aa24.41■■□□□ 1.5
CNOT9-209ENST00000627282 STK31Q9BXU1 1019 aa24.41■■□□□ 1.5
CNOT9-209ENST00000627282 HYPKQ9NX55 129 aa24.41■■□□□ 1.5
CNOT9-209ENST00000627282 A0A087WZG4 1122 aa24.4■■□□□ 1.5
CNOT9-209ENST00000627282 DZIP3Q86Y13 1208 aaKnown RBP24.4■■□□□ 1.5
CNOT9-209ENST00000627282 NARFQ9UHQ1 456 aa24.4■■□□□ 1.5
CNOT9-209ENST00000627282 UTRNP46939 3433 aa24.4■■□□□ 1.5
CNOT9-209ENST00000627282 SLC4A2P04920 1241 aa24.39■■□□□ 1.5
CNOT9-209ENST00000627282 NPM2Q86SE8 214 aaKnown RBP24.39■■□□□ 1.5
CNOT9-209ENST00000627282 XAGE3Q8WTP9 111 aa24.39■■□□□ 1.5
CNOT9-209ENST00000627282 PHAXQ9H814 394 aaKnown RBP24.39■■□□□ 1.5
CNOT9-209ENST00000627282 PLIN1O60240 522 aa24.39■■□□□ 1.49
CNOT9-209ENST00000627282 USPL1Q5W0Q7 1092 aa24.39■■□□□ 1.49
CNOT9-209ENST00000627282 COPS6Q7L5N1 327 aa24.39■■□□□ 1.49
CNOT9-209ENST00000627282 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.39■■□□□ 1.49
CNOT9-209ENST00000627282 EXOC6Q8TAG9 804 aa24.39■■□□□ 1.49
CNOT9-209ENST00000627282 SSH1Q8WYL5 1049 aa24.39■■□□□ 1.49
CNOT9-209ENST00000627282 ZNF428Q96B54 188 aa24.39■■□□□ 1.49
CNOT9-209ENST00000627282 GOLGB1Q14789 3259 aaKnown RBP24.38■■□□□ 1.49
CNOT9-209ENST00000627282 CAMTA2O94983 1202 aa24.38■■□□□ 1.49
CNOT9-209ENST00000627282 AIMP1Q12904 312 aaKnown RBP24.37■■□□□ 1.49
CNOT9-209ENST00000627282 G2E3Q7L622 706 aa24.37■■□□□ 1.49
CNOT9-209ENST00000627282 BCL2L12Q9HB09 334 aa24.37■■□□□ 1.49
CNOT9-209ENST00000627282 PARP3Q9Y6F1 533 aa24.37■■□□□ 1.49
CNOT9-209ENST00000627282 CACNA1FO60840 1977 aa24.36■■□□□ 1.49
CNOT9-209ENST00000627282 BCL2L13Q9BXK5 485 aa24.36■■□□□ 1.49
CNOT9-209ENST00000627282 RARSP54136 660 aaKnown RBP24.35■■□□□ 1.49
CNOT9-209ENST00000627282 GPR162Q16538 588 aa24.35■■□□□ 1.49
CNOT9-209ENST00000627282 ALDH1L2Q3SY69 923 aa24.35■■□□□ 1.49
CNOT9-209ENST00000627282 C10orf71Q711Q0 1435 aa24.35■■□□□ 1.49
CNOT9-209ENST00000627282 SCN7AQ01118 1682 aa24.35■■□□□ 1.49
CNOT9-209ENST00000627282 MAP3K15Q6ZN16 1313 aa24.35■■□□□ 1.49
CNOT9-209ENST00000627282 DDR1Q08345 913 aa24.35■■□□□ 1.49
CNOT9-209ENST00000627282 MRPL50Q8N5N7 158 aaKnown RBP24.35■■□□□ 1.49
CNOT9-209ENST00000627282 CCDC136Q96JN2 1154 aa24.35■■□□□ 1.49
CNOT9-209ENST00000627282 KIF13BQ9NQT8 1826 aa24.34■■□□□ 1.49
CNOT9-209ENST00000627282 BCORQ6W2J9 1755 aa24.34■■□□□ 1.49
CNOT9-209ENST00000627282 TM4SF1P30408 202 aa24.33■■□□□ 1.49
CNOT9-209ENST00000627282 HLFQ16534 295 aa24.33■■□□□ 1.49
CNOT9-209ENST00000627282 KIF6Q6ZMV9 814 aa24.33■■□□□ 1.49
CNOT9-209ENST00000627282 ZBTB3Q9H5J0 574 aa24.33■■□□□ 1.49
CNOT9-209ENST00000627282 FLIIQ13045 1269 aa24.32■■□□□ 1.48
CNOT9-209ENST00000627282 SMC4Q9NTJ3 1288 aa24.32■■□□□ 1.48
CNOT9-209ENST00000627282 ERVV-1B6SEH8 477 aa24.32■■□□□ 1.48
CNOT9-209ENST00000627282 POLRMTO00411 1230 aaKnown RBP24.31■■□□□ 1.48
CNOT9-209ENST00000627282 CRBNQ96SW2 442 aa24.31■■□□□ 1.48
CNOT9-209ENST00000627282 TSHZ2Q9NRE2 1034 aa24.31■■□□□ 1.48
CNOT9-209ENST00000627282 NFIXQ14938 502 aa24.3■■□□□ 1.48
CNOT9-209ENST00000627282 ANKRD13DQ6ZTN6 518 aa24.3■■□□□ 1.48
CNOT9-209ENST00000627282 PLBD2Q8NHP8 589 aa24.3■■□□□ 1.48
CNOT9-209ENST00000627282 PXDNLA1KZ92 1463 aa24.29■■□□□ 1.48
CNOT9-209ENST00000627282 YBX3P16989 372 aaKnown RBP eCLIP24.29■■□□□ 1.489e-6■■■□□ 18.1
CNOT9-209ENST00000627282 RGL2O15211 777 aa24.28■■□□□ 1.48
CNOT9-209ENST00000627282 BCAR3O75815 825 aa24.28■■□□□ 1.48
CNOT9-209ENST00000627282 BRPF1P55201 1214 aaPredicted RBP24.28■■□□□ 1.48
CNOT9-209ENST00000627282 C20orf194Q5TEA3 1177 aa24.28■■□□□ 1.48
CNOT9-209ENST00000627282 CLEC4GQ6UXB4 293 aa24.28■■□□□ 1.48
CNOT9-209ENST00000627282 ADCY9O60503 1353 aa24.28■■□□□ 1.48
CNOT9-209ENST00000627282 TGFB2P61812 414 aa24.28■■□□□ 1.48
CNOT9-209ENST00000627282 GIGYF2Q6Y7W6 1299 aaKnown RBP24.28■■□□□ 1.48
CNOT9-209ENST00000627282 KIAA1551Q9HCM1 1747 aa24.28■■□□□ 1.48
CNOT9-209ENST00000627282 NUP98P52948 1817 aa24.27■■□□□ 1.48
CNOT9-209ENST00000627282 FKBP5Q13451 457 aaPredicted RBP24.27■■□□□ 1.48
CNOT9-209ENST00000627282 TBC1D9BQ66K14 1250 aa24.27■■□□□ 1.48
CNOT9-209ENST00000627282 ZNF652Q9Y2D9 606 aa24.27■■□□□ 1.48
CNOT9-209ENST00000627282 PI4KAP2A4QPH2 592 aa24.26■■□□□ 1.47
CNOT9-209ENST00000627282 DDX58O95786 925 aaKnown RBP24.26■■□□□ 1.47
CNOT9-209ENST00000627282 YY1P25490 414 aa24.26■■□□□ 1.47
CNOT9-209ENST00000627282 KSR2Q6VAB6 950 aa24.26■■□□□ 1.47
CNOT9-209ENST00000627282 PI4KAP1Q8N8J0 262 aa24.26■■□□□ 1.47
CNOT9-209ENST00000627282 RIC3Q7Z5B4 369 aa24.25■■□□□ 1.47
CNOT9-209ENST00000627282 ARFGEF2Q9Y6D5 1785 aa24.25■■□□□ 1.47
CNOT9-209ENST00000627282 NRXN2Q9P2S2 1712 aa24.25■■□□□ 1.47
CNOT9-209ENST00000627282 GRIN3BO60391 1043 aa24.24■■□□□ 1.47
CNOT9-209ENST00000627282 MAP3K2Q9Y2U5 619 aa24.24■■□□□ 1.47
CNOT9-209ENST00000627282 ATP10DQ9P241 1426 aa24.24■■□□□ 1.47
CNOT9-209ENST00000627282 BICDL1Q6ZP65 573 aa24.24■■□□□ 1.47
CNOT9-209ENST00000627282 N4BP2Q86UW6 1770 aaPredicted RBP24.23■■□□□ 1.47
CNOT9-209ENST00000627282 NOB1Q9ULX3 412 aaKnown RBP24.23■■□□□ 1.47
CNOT9-209ENST00000627282 AFDNP55196 1824 aaKnown RBP24.23■■□□□ 1.47
CNOT9-209ENST00000627282 A0A0G2JLW4 131 aa24.22■■□□□ 1.47
CNOT9-209ENST00000627282 F6X3S4 739 aa24.22■■□□□ 1.47
CNOT9-209ENST00000627282 SERPINB2P05120 415 aa24.22■■□□□ 1.47
CNOT9-209ENST00000627282 TCIRG1Q13488 830 aa24.22■■□□□ 1.47
CNOT9-209ENST00000627282 ZNF34Q8IZ26 560 aa24.22■■□□□ 1.47
CNOT9-209ENST00000627282 WWC3Q9ULE0 1092 aa24.22■■□□□ 1.47
CNOT9-209ENST00000627282 NIP7Q9Y221 180 aaKnown RBP eCLIP24.22■■□□□ 1.47
CNOT9-209ENST00000627282 PTPRCP08575 1304 aa24.22■■□□□ 1.47
CNOT9-209ENST00000627282 DPEP1P16444 411 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms