RNA–Protein interactions for RNA: ENST00000626188.1

CHRNA4-208, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 441 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-208ENST00000626188 CCDC93Q567U6 631 aa20.94■□□□□ 0.94
CHRNA4-208ENST00000626188 ABT1Q9ULW3 272 aaKnown RBP20.94■□□□□ 0.94
CHRNA4-208ENST00000626188 SLX4Q8IY92 1834 aa20.93■□□□□ 0.94
CHRNA4-208ENST00000626188 EPHX2P34913 555 aa20.93■□□□□ 0.94
CHRNA4-208ENST00000626188 TEX13AQ9BXU3 409 aaPredicted RBP20.93■□□□□ 0.94
CHRNA4-208ENST00000626188 WDR33Q9C0J8 1336 aaKnown RBP20.93■□□□□ 0.94
CHRNA4-208ENST00000626188 CCDC85CA6NKD9 419 aa20.92■□□□□ 0.94
CHRNA4-208ENST00000626188 MLLT1Q03111 559 aaPredicted RBP20.92■□□□□ 0.94
CHRNA4-208ENST00000626188 MTHFSDQ2M296 383 aaKnown RBP20.92■□□□□ 0.94
CHRNA4-208ENST00000626188 MAP1SQ66K74 1059 aaPredicted RBP20.92■□□□□ 0.94
CHRNA4-208ENST00000626188 PNMA8AQ86V59 439 aaPredicted RBP20.92■□□□□ 0.94
CHRNA4-208ENST00000626188 CNTROBQ8N137 903 aa20.92■□□□□ 0.94
CHRNA4-208ENST00000626188 SCN7AQ01118 1682 aa20.92■□□□□ 0.94
CHRNA4-208ENST00000626188 VIRMAQ69YN4 1812 aaKnown RBP20.92■□□□□ 0.94
CHRNA4-208ENST00000626188 CACNA1SQ13698 1873 aa20.92■□□□□ 0.94
CHRNA4-208ENST00000626188 IL6STP40189 918 aaPredicted RBP20.91■□□□□ 0.94
CHRNA4-208ENST00000626188 ZNF496Q96IT1 587 aaPredicted RBP20.91■□□□□ 0.94
CHRNA4-208ENST00000626188 BEGAINQ9BUH8 593 aa20.91■□□□□ 0.94
CHRNA4-208ENST00000626188 ZNF541Q9H0D2 1346 aa20.91■□□□□ 0.94
CHRNA4-208ENST00000626188 ZNF277Q9NRM2 450 aaPredicted RBP20.91■□□□□ 0.94
CHRNA4-208ENST00000626188 FKBP4Q02790 459 aaKnown RBP eCLIP20.9■□□□□ 0.94
CHRNA4-208ENST00000626188 PAXIP1Q6ZW49 1069 aaPredicted RBP20.9■□□□□ 0.94
CHRNA4-208ENST00000626188 UBR2Q8IWV8 1755 aa20.9■□□□□ 0.94
CHRNA4-208ENST00000626188 HEG1Q9ULI3 1381 aa20.89■□□□□ 0.93
CHRNA4-208ENST00000626188 RNF123Q5XPI4 1314 aa20.89■□□□□ 0.93
CHRNA4-208ENST00000626188 TEFQ10587 303 aa20.89■□□□□ 0.93
CHRNA4-208ENST00000626188 KNSTRNQ9Y448 316 aa20.89■□□□□ 0.93
CHRNA4-208ENST00000626188 CAMTA2O94983 1202 aa20.88■□□□□ 0.93
CHRNA4-208ENST00000626188 ZNF790Q6PG37 636 aa20.88■□□□□ 0.93
CHRNA4-208ENST00000626188 NBPF5PQ86XG9 351 aaPredicted RBP20.88■□□□□ 0.93
CHRNA4-208ENST00000626188 C7orf43Q8WVR3 580 aa20.88■□□□□ 0.93
CHRNA4-208ENST00000626188 A1BGP04217 495 aa20.87■□□□□ 0.93
CHRNA4-208ENST00000626188 NPR1P16066 1061 aa20.87■□□□□ 0.93
CHRNA4-208ENST00000626188 ARFGEF2Q9Y6D5 1785 aa20.87■□□□□ 0.93
CHRNA4-208ENST00000626188 GRM1Q13255 1194 aa20.86■□□□□ 0.93
CHRNA4-208ENST00000626188 DZIP3Q86Y13 1208 aaKnown RBP20.86■□□□□ 0.93
CHRNA4-208ENST00000626188 PCDH10Q9P2E7 1040 aa20.86■□□□□ 0.93
CHRNA4-208ENST00000626188 RTKN2Q8IZC4 609 aa20.85■□□□□ 0.93
CHRNA4-208ENST00000626188 FMNL2Q96PY5 1086 aa20.85■□□□□ 0.93
CHRNA4-208ENST00000626188 IARSP41252 1262 aaKnown RBP20.84■□□□□ 0.93
CHRNA4-208ENST00000626188 ECE1P42892 770 aa20.84■□□□□ 0.93
CHRNA4-208ENST00000626188 GPC2Q8N158 579 aa20.84■□□□□ 0.93
CHRNA4-208ENST00000626188 CFAP44Q96MT7 982 aa20.84■□□□□ 0.93
CHRNA4-208ENST00000626188 DDX21Q9NR30 783 aaKnown RBP eCLIP20.84■□□□□ 0.93
CHRNA4-208ENST00000626188 ADAMTSL1Q8N6G6 1762 aa20.84■□□□□ 0.93
CHRNA4-208ENST00000626188 OLFM4Q6UX06 510 aa20.83■□□□□ 0.93
CHRNA4-208ENST00000626188 CAPNS2Q96L46 248 aa20.83■□□□□ 0.93
CHRNA4-208ENST00000626188 FZD9O00144 591 aa20.82■□□□□ 0.92
CHRNA4-208ENST00000626188 RGS19P49795 217 aa20.82■□□□□ 0.92
CHRNA4-208ENST00000626188 EIF4G2P78344 907 aaKnown RBP eCLIP20.82■□□□□ 0.92
CHRNA4-208ENST00000626188 SYNE4Q8N205 404 aa20.82■□□□□ 0.92
CHRNA4-208ENST00000626188 JDP2Q8WYK2 163 aa20.82■□□□□ 0.92
CHRNA4-208ENST00000626188 GPR101Q96P66 508 aaPredicted RBP20.82■□□□□ 0.92
CHRNA4-208ENST00000626188 TIMELESSQ9UNS1 1208 aa20.82■□□□□ 0.92
CHRNA4-208ENST00000626188 ZNF652Q9Y2D9 606 aa20.82■□□□□ 0.92
CHRNA4-208ENST00000626188 GJA3Q9Y6H8 435 aa20.82■□□□□ 0.92
CHRNA4-208ENST00000626188 DIAPH1O60610 1272 aaKnown RBP20.81■□□□□ 0.92
CHRNA4-208ENST00000626188 LMOD1P29536 600 aaPredicted RBP20.81■□□□□ 0.92
CHRNA4-208ENST00000626188 GNAT3A8MTJ3 354 aa20.8■□□□□ 0.92
CHRNA4-208ENST00000626188 CYP4F22Q6NT55 531 aa20.8■□□□□ 0.92
CHRNA4-208ENST00000626188 CLEC4GQ6UXB4 293 aa20.8■□□□□ 0.92
CHRNA4-208ENST00000626188 TPTE2Q6XPS3 522 aa20.8■□□□□ 0.92
CHRNA4-208ENST00000626188 IL17REQ8NFR9 667 aa20.8■□□□□ 0.92
CHRNA4-208ENST00000626188 FAM177BA6PVY3 158 aa20.79■□□□□ 0.92
CHRNA4-208ENST00000626188 HSPA5P11021 654 aaKnown RBP20.79■□□□□ 0.92
CHRNA4-208ENST00000626188 ALDH1B1P30837 517 aa20.79■□□□□ 0.92
CHRNA4-208ENST00000626188 PIP4K2AP48426 406 aaPredicted RBP20.79■□□□□ 0.92
CHRNA4-208ENST00000626188 EIF6P56537 245 aaKnown RBP20.79■□□□□ 0.92
CHRNA4-208ENST00000626188 TSKSQ9UJT2 592 aa20.79■□□□□ 0.92
CHRNA4-208ENST00000626188 BCORQ6W2J9 1755 aa20.78■□□□□ 0.92
CHRNA4-208ENST00000626188 KLRG2A4D1S0 409 aaPredicted RBP20.78■□□□□ 0.92
CHRNA4-208ENST00000626188 GAS2L2Q8NHY3 880 aa20.78■□□□□ 0.92
CHRNA4-208ENST00000626188 GTF2E1P29083 439 aaPredicted RBP20.77■□□□□ 0.92
CHRNA4-208ENST00000626188 FMR1Q06787 632 aaKnown RBP eCLIP20.77■□□□□ 0.92
CHRNA4-208ENST00000626188 NIP7Q9Y221 180 aaKnown RBP eCLIP20.77■□□□□ 0.92
CHRNA4-208ENST00000626188 BTBD11A6QL63 1104 aa20.76■□□□□ 0.91
CHRNA4-208ENST00000626188 USP16Q9Y5T5 823 aa20.76■□□□□ 0.91
CHRNA4-208ENST00000626188 AMER1Q5JTC6 1135 aaPredicted RBP20.75■□□□□ 0.91
CHRNA4-208ENST00000626188 PSMD1Q99460 953 aa20.75■□□□□ 0.91
CHRNA4-208ENST00000626188 THSD7BQ9C0I4 1608 aa20.75■□□□□ 0.91
CHRNA4-208ENST00000626188 U2SURPO15042 1029 aaKnown RBP20.74■□□□□ 0.91
CHRNA4-208ENST00000626188 KCNQ3O43525 872 aa20.74■□□□□ 0.91
CHRNA4-208ENST00000626188 TRAF5O00463 557 aa20.73■□□□□ 0.91
CHRNA4-208ENST00000626188 AOC2O75106 756 aa20.73■□□□□ 0.91
CHRNA4-208ENST00000626188 MAP2K2P36507 400 aa20.73■□□□□ 0.91
CHRNA4-208ENST00000626188 EPS15P42566 896 aa20.73■□□□□ 0.91
CHRNA4-208ENST00000626188 MCOLN1Q9GZU1 580 aa20.73■□□□□ 0.91
CHRNA4-208ENST00000626188 TLL2Q9Y6L7 1015 aa20.73■□□□□ 0.91
CHRNA4-208ENST00000626188 CA12O43570 354 aa20.72■□□□□ 0.91
CHRNA4-208ENST00000626188 CST9Q5W186 159 aa20.72■□□□□ 0.91
CHRNA4-208ENST00000626188 USP50Q70EL3 339 aaPredicted RBP20.72■□□□□ 0.91
CHRNA4-208ENST00000626188 LARGE2Q8N3Y3 721 aa20.72■□□□□ 0.91
CHRNA4-208ENST00000626188 SCNN1DP51172 638 aa20.71■□□□□ 0.91
CHRNA4-208ENST00000626188 CC2D2BQ6DHV5 1058 aa20.71■□□□□ 0.91
CHRNA4-208ENST00000626188 SIPA1L3O60292 1781 aaPredicted RBP20.71■□□□□ 0.91
CHRNA4-208ENST00000626188 PRAMEF22A3QJZ6 481 aa20.7■□□□□ 0.9
CHRNA4-208ENST00000626188 SNRPA1P09661 255 aaKnown RBP20.69■□□□□ 0.9
CHRNA4-208ENST00000626188 LTBP1Q14766 1721 aa20.68■□□□□ 0.9
CHRNA4-208ENST00000626188 RGL2O15211 777 aa20.68■□□□□ 0.9
CHRNA4-208ENST00000626188 DGKZQ13574 1117 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms