RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 PLEKHG3A1L390 1219 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 STK25O00506 426 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 DIAPH1O60610 1272 aaKnown RBP5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 REC8O95072 547 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 TPM3P06753 285 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 ZNF853P0CG23 659 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 GNAI1P63096 354 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 ABCA3Q99758 1704 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 OSBPL3Q9H4L5 887 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 STK24Q9Y6E0 443 aa5.07□□□□□ -1.6
PTP4A1-205ENST00000626021 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.07□□□□□ -1.62e-6■■□□□ 12.3
PTP4A1-205ENST00000626021 ADAMTS7Q9UKP4 1686 aa5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 SLIT3O75094 1523 aa5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 SYCE3A1L190 88 aa5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 LCE2BO14633 110 aa5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 NOLC1Q14978 699 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 SYCP1Q15431 976 aa5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 TAF3Q5VWG9 929 aa5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 ANKRD44Q8N8A2 993 aa5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 TMEM87AQ8NBN3 555 aa5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 NUDT16Q96DE0 195 aaKnown RBP5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 IFT57Q9NWB7 429 aa5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 CABP1Q9NZU7 370 aa5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 RBM27Q9P2N5 1060 aaKnown RBP5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 EID1Q9Y6B2 187 aa5.06□□□□□ -1.6
PTP4A1-205ENST00000626021 NLRP6P59044 892 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 ANAPC15P60006 121 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 FKBP5Q13451 457 aaPredicted RBP5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 TXNDC2Q86VQ3 553 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 THEMISQ8N1K5 641 aaPredicted RBP5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 GGNBP2Q9H3C7 697 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 MED1Q15648 1581 aaPredicted RBP5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 TTC21AQ8NDW8 1320 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 STRCQ7RTU9 1775 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 ABCC6O95255 1503 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 U2SURPO15042 1029 aaKnown RBP5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 ERC2O15083 957 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 PTMAP06454 111 aaKnown RBP5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 HAP1P54257 671 aaPredicted RBP5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 PKP1Q13835 747 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 NFE2L2Q16236 605 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 ZGPATQ8N5A5 531 aaKnown RBP5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 FEZ1Q99689 392 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 DIAPH3Q9NSV4 1193 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 NSFL1CQ9UNZ2 370 aaKnown RBP5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 KIF3AQ9Y496 699 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 LMTK3Q96Q04 1460 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 NPHP4O75161 1426 aaPredicted RBP5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 MST1RQ04912 1400 aa5.05□□□□□ -1.6
PTP4A1-205ENST00000626021 PARP4Q9UKK3 1724 aaKnown RBP5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 CEBPAP49715 358 aaPredicted RBP5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 ANKRD7Q92527 254 aa5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 BCL11BQ9C0K0 894 aaPredicted RBP5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 RTL1A6NKG5 1358 aa5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 COL18A1P39060 1754 aa5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 SCN11AQ9UI33 1791 aa5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 TTC21BQ7Z4L5 1316 aa5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 ARHGEF10O15013 1369 aa5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 TK2O00142 265 aa5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 SDSP20132 328 aa5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 LMOD3Q0VAK6 560 aa5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 DNTTIP2Q5QJE6 756 aaKnown RBP5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 ZNF775Q96BV0 537 aaPredicted RBP5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 TMX3Q96JJ7 454 aa5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 POLKQ9UBT6 870 aa5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 PKD1L3Q7Z443 1732 aa5.04□□□□□ -1.6
PTP4A1-205ENST00000626021 ATP10DQ9P241 1426 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 CTIFO43310 598 aaKnown RBP5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 MX1P20591 662 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 CCDC183Q5T5S1 534 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 ADGRD1Q6QNK2 874 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 NME9Q86XW9 330 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 USP25Q9UHP3 1055 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 KDRP35968 1356 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 KDM4AO75164 1064 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 MCCP23508 829 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 FAM193AP78312 1265 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 TWISTNBQ3B726 338 aaPredicted RBP5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 PDCL2Q8N4E4 241 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 KIAA1524Q8TCG1 905 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 BBXQ8WY36 941 aaPredicted RBP5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 C1orf115Q9H7X2 142 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 BCL2L12Q9HB09 334 aa5.03□□□□□ -1.6
PTP4A1-205ENST00000626021 DCCP43146 1447 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 NCAPD2Q15021 1401 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 ACEP12821 1306 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 WDR33Q9C0J8 1336 aaKnown RBP5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 SBNO1A3KN83 1393 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 WNK3Q9BYP7 1800 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 IL13P35225 146 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 FGD1P98174 961 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 GABPB1Q06547 395 aaPredicted RBP5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 PPP4R3BQ5MIZ7 849 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 ZNF787Q6DD87 383 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 CEP85Q6P2H3 762 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 TSPYL6Q8N831 410 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 FUCA2Q9BTY2 467 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 OGFRQ9NZT2 677 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 AMOTL2Q9Y2J4 779 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 RGS12O14924 1447 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms