RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 DZIP3Q86Y13 1208 aaKnown RBP21.16■□□□□ 0.98
CCNA1-203ENST00000625767 ARHGEF1Q92888 912 aaKnown RBP21.16■□□□□ 0.98
CCNA1-203ENST00000625767 PTPRCP08575 1304 aa21.16■□□□□ 0.98
CCNA1-203ENST00000625767 SCN7AQ01118 1682 aa21.15■□□□□ 0.98
CCNA1-203ENST00000625767 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.15■□□□□ 0.98
CCNA1-203ENST00000625767 TFCP2L1Q9NZI6 479 aa21.15■□□□□ 0.98
CCNA1-203ENST00000625767 SRP68Q9UHB9 627 aaKnown RBP21.15■□□□□ 0.98
CCNA1-203ENST00000625767 MAP3K2Q9Y2U5 619 aa21.15■□□□□ 0.98
CCNA1-203ENST00000625767 HLFQ16534 295 aa21.15■□□□□ 0.98
CCNA1-203ENST00000625767 ANKRD13DQ6ZTN6 518 aa21.15■□□□□ 0.98
CCNA1-203ENST00000625767 ARHGAP45Q92619 1136 aa21.14■□□□□ 0.97
CCNA1-203ENST00000625767 N4BP2Q86UW6 1770 aaPredicted RBP21.14■□□□□ 0.97
CCNA1-203ENST00000625767 AFDNP55196 1824 aaKnown RBP21.13■□□□□ 0.97
CCNA1-203ENST00000625767 MAP3K15Q6ZN16 1313 aa21.13■□□□□ 0.97
CCNA1-203ENST00000625767 IPO8O15397 1037 aaKnown RBP21.13■□□□□ 0.97
CCNA1-203ENST00000625767 SLC15A2Q16348 729 aa21.13■□□□□ 0.97
CCNA1-203ENST00000625767 SLC4A10Q6U841 1118 aa21.13■□□□□ 0.97
CCNA1-203ENST00000625767 KSR2Q6VAB6 950 aa21.13■□□□□ 0.97
CCNA1-203ENST00000625767 RIC3Q7Z5B4 369 aa21.13■□□□□ 0.97
CCNA1-203ENST00000625767 ANKRD36CQ5JPF3 1778 aa21.13■□□□□ 0.97
CCNA1-203ENST00000625767 ABCC4O15439 1325 aa21.12■□□□□ 0.97
CCNA1-203ENST00000625767 PNPLA7Q6ZV29 1317 aa21.12■□□□□ 0.97
CCNA1-203ENST00000625767 CAMTA2O94983 1202 aa21.12■□□□□ 0.97
CCNA1-203ENST00000625767 PLBD2Q8NHP8 589 aa21.12■□□□□ 0.97
CCNA1-203ENST00000625767 QSER1Q2KHR3 1735 aa21.12■□□□□ 0.97
CCNA1-203ENST00000625767 TRAPPC3LQ5T215 181 aa21.12■□□□□ 0.97
CCNA1-203ENST00000625767 KIF6Q6ZMV9 814 aa21.12■□□□□ 0.97
CCNA1-203ENST00000625767 DZIP1LQ8IYY4 767 aaKnown RBP21.12■□□□□ 0.97
CCNA1-203ENST00000625767 TMEM57Q8N5G2 664 aa21.12■□□□□ 0.97
CCNA1-203ENST00000625767 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.12■□□□□ 0.97
CCNA1-203ENST00000625767 DNAAF4Q8WXU2 420 aa21.12■□□□□ 0.97
CCNA1-203ENST00000625767 API5Q9BZZ5 524 aaKnown RBP21.12■□□□□ 0.97
CCNA1-203ENST00000625767 DDX58O95786 925 aaKnown RBP21.11■□□□□ 0.97
CCNA1-203ENST00000625767 SSFA2P28290 1259 aa21.11■□□□□ 0.97
CCNA1-203ENST00000625767 NPM2Q86SE8 214 aaKnown RBP21.11■□□□□ 0.97
CCNA1-203ENST00000625767 COL23A1Q86Y22 540 aaPredicted RBP21.11■□□□□ 0.97
CCNA1-203ENST00000625767 PDGFDQ9GZP0 370 aaPredicted RBP21.11■□□□□ 0.97
CCNA1-203ENST00000625767 BCL2L12Q9HB09 334 aa21.11■□□□□ 0.97
CCNA1-203ENST00000625767 USPL1Q5W0Q7 1092 aa21.1■□□□□ 0.97
CCNA1-203ENST00000625767 FTSJ3Q8IY81 847 aaKnown RBP21.1■□□□□ 0.97
CCNA1-203ENST00000625767 STK32BQ9NY57 414 aa21.1■□□□□ 0.97
CCNA1-203ENST00000625767 ATP5J2-PTCD1G3V325 749 aa21.09■□□□□ 0.97
CCNA1-203ENST00000625767 MYD88Q99836 296 aa21.09■□□□□ 0.97
CCNA1-203ENST00000625767 COG6Q9Y2V7 657 aa21.09■□□□□ 0.97
CCNA1-203ENST00000625767 RFC4P35249 363 aa21.09■□□□□ 0.97
CCNA1-203ENST00000625767 CWF19L2Q2TBE0 894 aaKnown RBP21.09■□□□□ 0.97
CCNA1-203ENST00000625767 NARFQ9UHQ1 456 aa21.09■□□□□ 0.97
CCNA1-203ENST00000625767 USP42Q9H9J4 1324 aaKnown RBP21.08■□□□□ 0.97
CCNA1-203ENST00000625767 IGKV5-2P06315 115 aa21.08■□□□□ 0.96
CCNA1-203ENST00000625767 METTL22Q9BUU2 404 aaPredicted RBP21.08■□□□□ 0.96
CCNA1-203ENST00000625767 A0A087WZG4 1122 aa21.07■□□□□ 0.96
CCNA1-203ENST00000625767 MSH5O43196 834 aa21.07■□□□□ 0.96
CCNA1-203ENST00000625767 ADRA2BP18089 450 aa21.07■□□□□ 0.96
CCNA1-203ENST00000625767 BEND3Q5T5X7 828 aa21.07■□□□□ 0.96
CCNA1-203ENST00000625767 GIGYF2Q6Y7W6 1299 aaKnown RBP21.07■□□□□ 0.96
CCNA1-203ENST00000625767 PXDNLA1KZ92 1463 aa21.07■□□□□ 0.96
CCNA1-203ENST00000625767 GPTP24298 496 aa21.06■□□□□ 0.96
CCNA1-203ENST00000625767 PDE3AQ14432 1141 aa21.06■□□□□ 0.96
CCNA1-203ENST00000625767 CRBNQ96SW2 442 aa21.06■□□□□ 0.96
CCNA1-203ENST00000625767 ERVV-1B6SEH8 477 aa21.05■□□□□ 0.96
CCNA1-203ENST00000625767 ZPR1O75312 459 aa21.05■□□□□ 0.96
CCNA1-203ENST00000625767 GYS1P13807 737 aa21.05■□□□□ 0.96
CCNA1-203ENST00000625767 FKBP8Q14318 412 aa21.05■□□□□ 0.96
CCNA1-203ENST00000625767 ITPRIPQ8IWB1 547 aa21.05■□□□□ 0.96
CCNA1-203ENST00000625767 ATP10DQ9P241 1426 aa21.05■□□□□ 0.96
CCNA1-203ENST00000625767 UBN2Q6ZU65 1347 aa21.04■□□□□ 0.96
CCNA1-203ENST00000625767 TCIRG1Q13488 830 aa21.04■□□□□ 0.96
CCNA1-203ENST00000625767 TBC1D9BQ66K14 1250 aa21.04■□□□□ 0.96
CCNA1-203ENST00000625767 INTS3Q68E01 1043 aaKnown RBP21.04■□□□□ 0.96
CCNA1-203ENST00000625767 HMGB2P26583 209 aaKnown RBP21.03■□□□□ 0.96
CCNA1-203ENST00000625767 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
CCNA1-203ENST00000625767 NEURL1BA8MQ27 555 aa21.02■□□□□ 0.96
CCNA1-203ENST00000625767 MVPQ14764 893 aaKnown RBP21.02■□□□□ 0.96
CCNA1-203ENST00000625767 R3HDM1Q15032 1099 aaKnown RBP21.02■□□□□ 0.96
CCNA1-203ENST00000625767 EXOC6Q8TAG9 804 aa21.02■□□□□ 0.96
CCNA1-203ENST00000625767 JARID2Q92833 1246 aaPredicted RBP21.02■□□□□ 0.96
CCNA1-203ENST00000625767 ISCA1Q9BUE6 129 aa21.02■□□□□ 0.96
CCNA1-203ENST00000625767 SRCIN1Q9C0H9 1055 aa21.02■□□□□ 0.96
CCNA1-203ENST00000625767 CASZ1Q86V15 1759 aa21.02■□□□□ 0.96
CCNA1-203ENST00000625767 MSL1Q68DK7 614 aa21.02■□□□□ 0.95
CCNA1-203ENST00000625767 LINS1Q8NG48 757 aa21.02■□□□□ 0.95
CCNA1-203ENST00000625767 PSDA5PKW4 1024 aaPredicted RBP21.01■□□□□ 0.95
CCNA1-203ENST00000625767 CCT4P50991 539 aaKnown RBP21.01■□□□□ 0.95
CCNA1-203ENST00000625767 NEXNQ0ZGT2 675 aa21.01■□□□□ 0.95
CCNA1-203ENST00000625767 ZNF34Q8IZ26 560 aa21.01■□□□□ 0.95
CCNA1-203ENST00000625767 COL24A1Q17RW2 1714 aa21.01■□□□□ 0.95
CCNA1-203ENST00000625767 FAM177BA6PVY3 158 aa21■□□□□ 0.95
CCNA1-203ENST00000625767 FLAD1Q8NFF5 587 aa21■□□□□ 0.95
CCNA1-203ENST00000625767 MEIS3Q99687 375 aa21■□□□□ 0.95
CCNA1-203ENST00000625767 NIP7Q9Y221 180 aaKnown RBP eCLIP21■□□□□ 0.95
CCNA1-203ENST00000625767 SRCAPQ6ZRS2 3230 aa21■□□□□ 0.95
CCNA1-203ENST00000625767 MS4A1P11836 297 aa20.99■□□□□ 0.95
CCNA1-203ENST00000625767 RTL5Q5HYW3 569 aaPredicted RBP20.99■□□□□ 0.95
CCNA1-203ENST00000625767 CLEC4GQ6UXB4 293 aa20.99■□□□□ 0.95
CCNA1-203ENST00000625767 NLRP10Q86W26 655 aa20.99■□□□□ 0.95
CCNA1-203ENST00000625767 ZNF652Q9Y2D9 606 aa20.99■□□□□ 0.95
CCNA1-203ENST00000625767 SYNE4Q8N205 404 aa20.99■□□□□ 0.95
CCNA1-203ENST00000625767 GCKRQ14397 625 aa20.98■□□□□ 0.95
CCNA1-203ENST00000625767 NFIXQ14938 502 aa20.98■□□□□ 0.95
CCNA1-203ENST00000625767 HSP90AB3PQ58FF7 597 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms