RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 THSD7BQ9C0I4 1608 aa19.2■□□□□ 0.66
SNX1-214ENST00000625244 RNF123Q5XPI4 1314 aa19.2■□□□□ 0.66
SNX1-214ENST00000625244 SRGNP10124 158 aa19.19■□□□□ 0.66
SNX1-214ENST00000625244 EIF5P55010 431 aaKnown RBP19.19■□□□□ 0.66
SNX1-214ENST00000625244 CDCA8Q53HL2 280 aa19.19■□□□□ 0.66
SNX1-214ENST00000625244 SLC52A2Q9HAB3 445 aa19.19■□□□□ 0.66
SNX1-214ENST00000625244 ECE1P42892 770 aa19.18■□□□□ 0.66
SNX1-214ENST00000625244 C7orf43Q8WVR3 580 aa19.18■□□□□ 0.66
SNX1-214ENST00000625244 LGR6Q9HBX8 967 aa19.18■□□□□ 0.66
SNX1-214ENST00000625244 ZNF277Q9NRM2 450 aaPredicted RBP19.18■□□□□ 0.66
SNX1-214ENST00000625244 AOC2O75106 756 aa19.16■□□□□ 0.66
SNX1-214ENST00000625244 MASTLQ96GX5 879 aa19.16■□□□□ 0.66
SNX1-214ENST00000625244 SCN11AQ9UI33 1791 aa19.16■□□□□ 0.66
SNX1-214ENST00000625244 LTBP1Q14766 1721 aa19.15■□□□□ 0.66
SNX1-214ENST00000625244 FKBP4Q02790 459 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNX1-214ENST00000625244 CCDC93Q567U6 631 aa19.15■□□□□ 0.66
SNX1-214ENST00000625244 SULT6B1Q6IMI4 303 aa19.15■□□□□ 0.66
SNX1-214ENST00000625244 CNBD1Q8NA66 436 aa19.15■□□□□ 0.66
SNX1-214ENST00000625244 A0A087WZG4 1122 aa19.14■□□□□ 0.65
SNX1-214ENST00000625244 DGKZQ13574 1117 aa19.14■□□□□ 0.65
SNX1-214ENST00000625244 AKAP4Q5JQC9 854 aa19.14■□□□□ 0.65
SNX1-214ENST00000625244 CST9Q5W186 159 aa19.14■□□□□ 0.65
SNX1-214ENST00000625244 VSIG10Q8N0Z9 540 aa19.14■□□□□ 0.65
SNX1-214ENST00000625244 TBC1D2BQ9UPU7 963 aa19.14■□□□□ 0.65
SNX1-214ENST00000625244 CACNA1SQ13698 1873 aa19.14■□□□□ 0.65
SNX1-214ENST00000625244 FZD9O00144 591 aa19.13■□□□□ 0.65
SNX1-214ENST00000625244 OLFM4Q6UX06 510 aa19.13■□□□□ 0.65
SNX1-214ENST00000625244 CASP8AP2Q9UKL3 1982 aa19.12■□□□□ 0.65
SNX1-214ENST00000625244 MAP2K2P36507 400 aa19.12■□□□□ 0.65
SNX1-214ENST00000625244 GPC2Q8N158 579 aa19.12■□□□□ 0.65
SNX1-214ENST00000625244 TRAF5O00463 557 aa19.11■□□□□ 0.65
SNX1-214ENST00000625244 NPHP1O15259 732 aa19.11■□□□□ 0.65
SNX1-214ENST00000625244 RNMTO43148 476 aaKnown RBP19.11■□□□□ 0.65
SNX1-214ENST00000625244 ST5P78524 1137 aa19.11■□□□□ 0.65
SNX1-214ENST00000625244 SETDB2Q96T68 719 aa19.11■□□□□ 0.65
SNX1-214ENST00000625244 TLL2Q9Y6L7 1015 aa19.11■□□□□ 0.65
SNX1-214ENST00000625244 MRC1P22897 1456 aa19.1■□□□□ 0.65
SNX1-214ENST00000625244 STARD3NLO95772 234 aa19.1■□□□□ 0.65
SNX1-214ENST00000625244 ZNF330Q9Y3S2 320 aaPredicted RBP19.1■□□□□ 0.65
SNX1-214ENST00000625244 ARFGEF2Q9Y6D5 1785 aa19.1■□□□□ 0.65
SNX1-214ENST00000625244 CA12O43570 354 aa19.09■□□□□ 0.65
SNX1-214ENST00000625244 SCN7AQ01118 1682 aa19.08■□□□□ 0.65
SNX1-214ENST00000625244 IARSP41252 1262 aaKnown RBP19.08■□□□□ 0.64
SNX1-214ENST00000625244 CAMTA2O94983 1202 aa19.07■□□□□ 0.64
SNX1-214ENST00000625244 SOX10P56693 466 aa19.07■□□□□ 0.64
SNX1-214ENST00000625244 RTKN2Q8IZC4 609 aa19.07■□□□□ 0.64
SNX1-214ENST00000625244 SYNE4Q8N205 404 aa19.07■□□□□ 0.64
SNX1-214ENST00000625244 GJA3Q9Y6H8 435 aa19.07■□□□□ 0.64
SNX1-214ENST00000625244 NPR1P16066 1061 aa19.06■□□□□ 0.64
SNX1-214ENST00000625244 EPS15P42566 896 aa19.06■□□□□ 0.64
SNX1-214ENST00000625244 PRPF38BQ5VTL8 546 aaKnown RBP19.06■□□□□ 0.64
SNX1-214ENST00000625244 SCNN1DP51172 638 aa19.05■□□□□ 0.64
SNX1-214ENST00000625244 BRPF1P55201 1214 aaPredicted RBP19.05■□□□□ 0.64
SNX1-214ENST00000625244 SAPCD2Q86UD0 394 aa19.05■□□□□ 0.64
SNX1-214ENST00000625244 LMOD1P29536 600 aaPredicted RBP19.04■□□□□ 0.64
SNX1-214ENST00000625244 IL13P35225 146 aa19.04■□□□□ 0.64
SNX1-214ENST00000625244 IL6STP40189 918 aaPredicted RBP19.04■□□□□ 0.64
SNX1-214ENST00000625244 KLRG2A4D1S0 409 aaPredicted RBP19.03■□□□□ 0.64
SNX1-214ENST00000625244 CIAPIN1Q6FI81 312 aa19.03■□□□□ 0.64
SNX1-214ENST00000625244 UBR2Q8IWV8 1755 aa19.03■□□□□ 0.64
SNX1-214ENST00000625244 COL4A5P29400 1685 aa19.02■□□□□ 0.64
SNX1-214ENST00000625244 A1BGP04217 495 aa19.02■□□□□ 0.64
SNX1-214ENST00000625244 NBPF5PQ86XG9 351 aaPredicted RBP19.02■□□□□ 0.64
SNX1-214ENST00000625244 TTC5Q8N0Z6 440 aa19.02■□□□□ 0.64
SNX1-214ENST00000625244 JDP2Q8WYK2 163 aa19.02■□□□□ 0.64
SNX1-214ENST00000625244 ZNF496Q96IT1 587 aaPredicted RBP19.02■□□□□ 0.64
SNX1-214ENST00000625244 TRPM7Q96QT4 1865 aa19.02■□□□□ 0.64
SNX1-214ENST00000625244 CELF2O95319 508 aaKnown RBP19.01■□□□□ 0.63
SNX1-214ENST00000625244 EIF6P56537 245 aaKnown RBP19.01■□□□□ 0.63
SNX1-214ENST00000625244 USP50Q70EL3 339 aaPredicted RBP19.01■□□□□ 0.63
SNX1-214ENST00000625244 ZIC5Q96T25 663 aa19.01■□□□□ 0.63
SNX1-214ENST00000625244 SNED1Q8TER0 1413 aa19■□□□□ 0.63
SNX1-214ENST00000625244 HEG1Q9ULI3 1381 aa19■□□□□ 0.63
SNX1-214ENST00000625244 MTHFSDQ2M296 383 aaKnown RBP18.99■□□□□ 0.63
SNX1-214ENST00000625244 DZIP3Q86Y13 1208 aaKnown RBP18.99■□□□□ 0.63
SNX1-214ENST00000625244 HHIPL1Q96JK4 782 aa18.99■□□□□ 0.63
SNX1-214ENST00000625244 PSMD1Q99460 953 aa18.99■□□□□ 0.63
SNX1-214ENST00000625244 TEX13AQ9BXU3 409 aaPredicted RBP18.99■□□□□ 0.63
SNX1-214ENST00000625244 POLR3GLQ9BT43 218 aa18.98■□□□□ 0.63
SNX1-214ENST00000625244 NPM2Q86SE8 214 aaKnown RBP18.97■□□□□ 0.63
SNX1-214ENST00000625244 HMOX1P09601 288 aa18.96■□□□□ 0.63
SNX1-214ENST00000625244 ZNF790Q6PG37 636 aa18.96■□□□□ 0.63
SNX1-214ENST00000625244 GLIS2Q9BZE0 524 aaPredicted RBP18.96■□□□□ 0.63
SNX1-214ENST00000625244 MKI67P46013 3256 aaKnown RBP18.96■□□□□ 0.63
SNX1-214ENST00000625244 ALDH1B1P30837 517 aa18.95■□□□□ 0.62
SNX1-214ENST00000625244 PIP4K2AP48426 406 aaPredicted RBP18.95■□□□□ 0.62
SNX1-214ENST00000625244 MORC1Q86VD1 984 aa18.95■□□□□ 0.62
SNX1-214ENST00000625244 BCORQ6W2J9 1755 aa18.95■□□□□ 0.62
SNX1-214ENST00000625244 CLEC4GQ6UXB4 293 aa18.94■□□□□ 0.62
SNX1-214ENST00000625244 TPTE2Q6XPS3 522 aa18.94■□□□□ 0.62
SNX1-214ENST00000625244 LARGE2Q8N3Y3 721 aa18.94■□□□□ 0.62
SNX1-214ENST00000625244 ZNF408Q9H9D4 720 aa18.94■□□□□ 0.62
SNX1-214ENST00000625244 ADARB2Q9NS39 739 aaKnown RBP18.94■□□□□ 0.62
SNX1-214ENST00000625244 FAM177BA6PVY3 158 aa18.93■□□□□ 0.62
SNX1-214ENST00000625244 SLC51AQ86UW1 340 aa18.93■□□□□ 0.62
SNX1-214ENST00000625244 NOGQ13253 232 aa18.92■□□□□ 0.62
SNX1-214ENST00000625244 PANK3Q9H999 370 aa18.92■□□□□ 0.62
SNX1-214ENST00000625244 GPRC5DQ9NZD1 345 aa18.92■□□□□ 0.62
SNX1-214ENST00000625244 FMNL2Q96PY5 1086 aa18.91■□□□□ 0.62
SNX1-214ENST00000625244 NIP7Q9Y221 180 aaKnown RBP eCLIP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms