RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 EYA3Q99504 573 aa12.14□□□□□ -0.47
SRGAP2-217ENST00000624873 ECHDC1Q9NTX5 307 aa12.14□□□□□ -0.47
SRGAP2-217ENST00000624873 DDX11L8A8MPP1 907 aa12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 U3KPZ7 1027 aaPredicted RBP12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 ANKARQ7Z5J8 1434 aa12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 GLI2P10070 1586 aa12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 UNC5CLQ8IV45 518 aa12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 ZGPATQ8N5A5 531 aaKnown RBP12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 LGR6Q9HBX8 967 aa12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 ATP7BP35670 1465 aa12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 IL15P40933 162 aaPredicted RBP12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 WDR17Q8IZU2 1322 aa12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 SYNMO15061 1565 aa12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 USP6P35125 1406 aa12.13□□□□□ -0.47
SRGAP2-217ENST00000624873 MPHOSPH10O00566 681 aaKnown RBP12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 VAMP4O75379 141 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 ATP2B3Q16720 1220 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 DNAJC10Q8IXB1 793 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 GZF1Q9H116 711 aaPredicted RBP12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 NSFL1CQ9UNZ2 370 aaKnown RBP12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 MINDY4BA8MYZ0 360 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 FOSBP53539 338 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 GSTO1P78417 241 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 PAXIP1Q6ZW49 1069 aaPredicted RBP12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 NUP133Q8WUM0 1156 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 IQGAP3Q86VI3 1631 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 SPATA31A3Q5VYP0 1347 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 SH3TC1Q8TE82 1336 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 MRPL50Q8N5N7 158 aaKnown RBP12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 PLBD2Q8NHP8 589 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 CDC42BPBQ9Y5S2 1711 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 PHKG2P15735 406 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 BICD2Q8TD16 824 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 RBM17Q96I25 401 aaKnown RBP12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 ANKRD2Q9GZV1 360 aa12.12□□□□□ -0.47
SRGAP2-217ENST00000624873 SMARCA5O60264 1052 aaPredicted RBP12.11□□□□□ -0.47
SRGAP2-217ENST00000624873 TPM2P07951 284 aa12.11□□□□□ -0.47
SRGAP2-217ENST00000624873 KRT27Q7Z3Y8 459 aa12.11□□□□□ -0.47
SRGAP2-217ENST00000624873 ZNF444Q8N0Y2 327 aaPredicted RBP12.11□□□□□ -0.47
SRGAP2-217ENST00000624873 PRR36Q9H6K5 1346 aa12.11□□□□□ -0.47
SRGAP2-217ENST00000624873 AGLP35573 1532 aa12.11□□□□□ -0.47
SRGAP2-217ENST00000624873 ZNF804AQ7Z570 1209 aa12.11□□□□□ -0.47
SRGAP2-217ENST00000624873 ADGRL3Q9HAR2 1447 aa12.11□□□□□ -0.47
SRGAP2-217ENST00000624873 CDKL5O76039 1030 aa12.11□□□□□ -0.47
SRGAP2-217ENST00000624873 RNF41Q9H4P4 317 aaPredicted RBP12.11□□□□□ -0.47
SRGAP2-217ENST00000624873 CHMP5Q9NZZ3 219 aa12.11□□□□□ -0.47
SRGAP2-217ENST00000624873 PLA2R1Q13018 1463 aa12.1□□□□□ -0.47
SRGAP2-217ENST00000624873 AATKQ6ZMQ8 1374 aa12.1□□□□□ -0.47
SRGAP2-217ENST00000624873 PES1O00541 588 aaKnown RBP12.1□□□□□ -0.47
SRGAP2-217ENST00000624873 DDX49Q9Y6V7 483 aaKnown RBP12.1□□□□□ -0.47
SRGAP2-217ENST00000624873 RTL1A6NKG5 1358 aa12.1□□□□□ -0.47
SRGAP2-217ENST00000624873 CHL1O00533 1208 aa12.1□□□□□ -0.47
SRGAP2-217ENST00000624873 ZNF496Q96IT1 587 aaPredicted RBP12.1□□□□□ -0.47
SRGAP2-217ENST00000624873 KDM5AP29375 1690 aaKnown RBP12.1□□□□□ -0.47
SRGAP2-217ENST00000624873 HLA-DOAP06340 250 aa12.1□□□□□ -0.47
SRGAP2-217ENST00000624873 MEIS3Q99687 375 aa12.1□□□□□ -0.47
SRGAP2-217ENST00000624873 A1BGP04217 495 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 CCDC73Q6ZRK6 1079 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 EVI5LQ96CN4 794 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 THRAP3Q9Y2W1 955 aaKnown RBP12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 KIF24Q5T7B8 1368 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 KRT24Q2M2I5 525 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 SKOR2Q2VWA4 1001 aaPredicted RBP12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 CCDC191Q8NCU4 936 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 SNRKQ9NRH2 765 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 DIP2BQ9P265 1576 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 DIP2CQ9Y2E4 1556 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 TSPYL6Q8N831 410 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 BECN2A8MW95 431 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 H0YIN7 160 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 GOLIM4O00461 696 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 ATP2B1P20020 1258 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 IQCA1Q86XH1 822 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 ADGRB3O60242 1522 aa12.09□□□□□ -0.47
SRGAP2-217ENST00000624873 PTPRMP28827 1452 aa12.08□□□□□ -0.47
SRGAP2-217ENST00000624873 RHPN1Q8TCX5 695 aa12.08□□□□□ -0.48
SRGAP2-217ENST00000624873 KDM4AO75164 1064 aa12.08□□□□□ -0.48
SRGAP2-217ENST00000624873 C20orf194Q5TEA3 1177 aa12.08□□□□□ -0.48
SRGAP2-217ENST00000624873 CABP5Q9NP86 173 aa12.08□□□□□ -0.48
SRGAP2-217ENST00000624873 RNF17Q9BXT8 1623 aaKnown RBP12.08□□□□□ -0.48
SRGAP2-217ENST00000624873 ATP8B2P98198 1209 aa12.08□□□□□ -0.48
SRGAP2-217ENST00000624873 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
SRGAP2-217ENST00000624873 ANKRD20A12PQ8NF67 263 aa12.08□□□□□ -0.48
SRGAP2-217ENST00000624873 CLEC11AQ9Y240 323 aa12.08□□□□□ -0.48
SRGAP2-217ENST00000624873 JAKMIP1Q96N16 626 aaKnown RBP12.08□□□□□ -0.48
SRGAP2-217ENST00000624873 METTL22Q9BUU2 404 aaPredicted RBP12.07□□□□□ -0.48
SRGAP2-217ENST00000624873 ERBB3P21860 1342 aa12.07□□□□□ -0.48
SRGAP2-217ENST00000624873 GOLGA6L19H0YKK7 550 aa12.07□□□□□ -0.48
SRGAP2-217ENST00000624873 SEPT12Q8IYM1 358 aa12.07□□□□□ -0.48
SRGAP2-217ENST00000624873 TSHZ2Q9NRE2 1034 aa12.07□□□□□ -0.48
SRGAP2-217ENST00000624873 WWC3Q9ULE0 1092 aa12.07□□□□□ -0.48
SRGAP2-217ENST00000624873 R3HCC1Q9Y3T6 440 aaKnown RBP12.07□□□□□ -0.48
SRGAP2-217ENST00000624873 ZNF213O14771 459 aa12.07□□□□□ -0.48
SRGAP2-217ENST00000624873 CRNKL1Q9BZJ0 848 aaKnown RBP12.07□□□□□ -0.48
SRGAP2-217ENST00000624873 PHAXQ9H814 394 aaKnown RBP12.07□□□□□ -0.48
SRGAP2-217ENST00000624873 ZFYP08048 801 aaPredicted RBP12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 TXLNAP40222 546 aa12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 TSR1Q2NL82 804 aaKnown RBP12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 ZSCAN31Q96LW9 406 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms