RNA–Protein interactions for RNA: ENST00000624193.1

ATRX-215, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 4

Gene ATRX, Length 463 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-215ENST00000624193 CNKSR1Q969H4 720 aa20.58■□□□□ 0.89
ATRX-215ENST00000624193 HSPA1AP0DMV8 641 aaKnown RBP20.57■□□□□ 0.88
ATRX-215ENST00000624193 HSPA1BP0DMV9 641 aaKnown RBP20.57■□□□□ 0.88
ATRX-215ENST00000624193 STYK1Q6J9G0 422 aa20.57■□□□□ 0.88
ATRX-215ENST00000624193 PRPF40BQ6NWY9 871 aaKnown RBP20.57■□□□□ 0.88
ATRX-215ENST00000624193 DZIP3Q86Y13 1208 aaKnown RBP20.57■□□□□ 0.88
ATRX-215ENST00000624193 PHACTR3Q96KR7 559 aa20.57■□□□□ 0.88
ATRX-215ENST00000624193 SRGNP10124 158 aa20.56■□□□□ 0.88
ATRX-215ENST00000624193 PRKAR2BP31323 418 aa20.56■□□□□ 0.88
ATRX-215ENST00000624193 PIP4K2AP48426 406 aaPredicted RBP20.56■□□□□ 0.88
ATRX-215ENST00000624193 RSPH6AQ9H0K4 717 aa20.55■□□□□ 0.88
ATRX-215ENST00000624193 USP16Q9Y5T5 823 aa20.55■□□□□ 0.88
ATRX-215ENST00000624193 DDNO94850 711 aaPredicted RBP20.54■□□□□ 0.88
ATRX-215ENST00000624193 SOGA3Q5TF21 947 aa20.54■□□□□ 0.88
ATRX-215ENST00000624193 CHADLQ6NUI6 762 aa20.54■□□□□ 0.88
ATRX-215ENST00000624193 MASTLQ96GX5 879 aa20.54■□□□□ 0.88
ATRX-215ENST00000624193 PRAMEF22A3QJZ6 481 aa20.53■□□□□ 0.88
ATRX-215ENST00000624193 POTEIP0CG38 1075 aa20.53■□□□□ 0.88
ATRX-215ENST00000624193 POTEJP0CG39 1038 aa20.53■□□□□ 0.88
ATRX-215ENST00000624193 NBPF5PQ86XG9 351 aaPredicted RBP20.53■□□□□ 0.88
ATRX-215ENST00000624193 CFAP53Q96M91 514 aa20.52■□□□□ 0.88
ATRX-215ENST00000624193 CREBZFQ9NS37 354 aa20.51■□□□□ 0.87
ATRX-215ENST00000624193 ZNF652Q9Y2D9 606 aa20.51■□□□□ 0.87
ATRX-215ENST00000624193 CLEC4GQ6UXB4 293 aa20.5■□□□□ 0.87
ATRX-215ENST00000624193 MCM10Q7L590 875 aa20.5■□□□□ 0.87
ATRX-215ENST00000624193 MKRN1Q9UHC7 482 aaKnown RBP20.5■□□□□ 0.87
ATRX-215ENST00000624193 SCN4AP35499 1836 aa20.5■□□□□ 0.87
ATRX-215ENST00000624193 SNRPA1P09661 255 aaKnown RBP20.49■□□□□ 0.87
ATRX-215ENST00000624193 CCDC93Q567U6 631 aa20.49■□□□□ 0.87
ATRX-215ENST00000624193 RTF1Q92541 710 aaKnown RBP20.49■□□□□ 0.87
ATRX-215ENST00000624193 PCNTO95613 3336 aa20.48■□□□□ 0.87
ATRX-215ENST00000624193 NPR1P16066 1061 aa20.48■□□□□ 0.87
ATRX-215ENST00000624193 C7orf43Q8WVR3 580 aa20.48■□□□□ 0.87
ATRX-215ENST00000624193 IQCA1LA6NCM1 817 aa20.47■□□□□ 0.87
ATRX-215ENST00000624193 U2AF1L5P0DN76 240 aaPredicted RBP20.47■□□□□ 0.87
ATRX-215ENST00000624193 U2AF1Q01081 240 aaKnown RBP eCLIP20.47■□□□□ 0.87
ATRX-215ENST00000624193 NUDCQ9Y266 331 aa20.47■□□□□ 0.87
ATRX-215ENST00000624193 LAMB4A4D0S4 1761 aa20.46■□□□□ 0.87
ATRX-215ENST00000624193 NBPF26B4DH59 902 aa20.46■□□□□ 0.87
ATRX-215ENST00000624193 NBPF10Q6P3W6 841 aaKnown RBP20.46■□□□□ 0.87
ATRX-215ENST00000624193 NBPF15Q8N660 670 aa20.46■□□□□ 0.87
ATRX-215ENST00000624193 L3MBTL3Q96JM7 780 aaPredicted RBP20.46■□□□□ 0.87
ATRX-215ENST00000624193 NIP7Q9Y221 180 aaKnown RBP eCLIP20.46■□□□□ 0.87
ATRX-215ENST00000624193 KLRG2A4D1S0 409 aaPredicted RBP20.45■□□□□ 0.86
ATRX-215ENST00000624193 FAM177BA6PVY3 158 aa20.45■□□□□ 0.86
ATRX-215ENST00000624193 FKBP4Q02790 459 aaKnown RBP eCLIP20.45■□□□□ 0.86
ATRX-215ENST00000624193 DCTN1Q14203 1278 aa20.45■□□□□ 0.86
ATRX-215ENST00000624193 OLFM4Q6UX06 510 aa20.45■□□□□ 0.86
ATRX-215ENST00000624193 TPTE2Q6XPS3 522 aa20.45■□□□□ 0.86
ATRX-215ENST00000624193 LDHDQ86WU2 507 aa20.45■□□□□ 0.86
ATRX-215ENST00000624193 TAF1DQ9H5J8 278 aaPredicted RBP20.45■□□□□ 0.86
ATRX-215ENST00000624193 ZNF277Q9NRM2 450 aaPredicted RBP20.45■□□□□ 0.86
ATRX-215ENST00000624193 ZNF541Q9H0D2 1346 aa20.45■□□□□ 0.86
ATRX-215ENST00000624193 PASKQ96RG2 1323 aa20.44■□□□□ 0.86
ATRX-215ENST00000624193 RGL2O15211 777 aa20.43■□□□□ 0.86
ATRX-215ENST00000624193 CNTNAP1P78357 1384 aa20.43■□□□□ 0.86
ATRX-215ENST00000624193 PPP2R1AP30153 589 aa20.42■□□□□ 0.86
ATRX-215ENST00000624193 HLFQ16534 295 aa20.42■□□□□ 0.86
ATRX-215ENST00000624193 EAPPQ56P03 285 aaPredicted RBP20.42■□□□□ 0.86
ATRX-215ENST00000624193 ADAMTSL1Q8N6G6 1762 aa20.41■□□□□ 0.86
ATRX-215ENST00000624193 RTKN2Q8IZC4 609 aa20.41■□□□□ 0.86
ATRX-215ENST00000624193 HTATSF1O43719 755 aaKnown RBP20.4■□□□□ 0.86
ATRX-215ENST00000624193 GTF2E1P29083 439 aaPredicted RBP20.4■□□□□ 0.86
ATRX-215ENST00000624193 HACL1Q9UJ83 578 aa20.4■□□□□ 0.86
ATRX-215ENST00000624193 ALDH1B1P30837 517 aa20.39■□□□□ 0.85
ATRX-215ENST00000624193 IARSP41252 1262 aaKnown RBP20.39■□□□□ 0.85
ATRX-215ENST00000624193 TAF7Q15545 349 aaPredicted RBP20.39■□□□□ 0.85
ATRX-215ENST00000624193 MIS18AQ9NYP9 233 aa20.39■□□□□ 0.85
ATRX-215ENST00000624193 DLG5Q8TDM6 1919 aa20.39■□□□□ 0.85
ATRX-215ENST00000624193 NUP98P52948 1817 aa20.39■□□□□ 0.85
ATRX-215ENST00000624193 KDM3BQ7LBC6 1761 aa20.39■□□□□ 0.85
ATRX-215ENST00000624193 ABCC12Q96J65 1359 aa20.38■□□□□ 0.85
ATRX-215ENST00000624193 RNF123Q5XPI4 1314 aa20.38■□□□□ 0.85
ATRX-215ENST00000624193 TMEM88BA6NKF7 163 aa20.38■□□□□ 0.85
ATRX-215ENST00000624193 FOXN1O15353 648 aa20.38■□□□□ 0.85
ATRX-215ENST00000624193 ITGBL1O95965 494 aaPredicted RBP20.38■□□□□ 0.85
ATRX-215ENST00000624193 EPHX2P34913 555 aa20.38■□□□□ 0.85
ATRX-215ENST00000624193 SYNE4Q8N205 404 aa20.38■□□□□ 0.85
ATRX-215ENST00000624193 CLEC11AQ9Y240 323 aa20.38■□□□□ 0.85
ATRX-215ENST00000624193 NGEFQ8N5V2 710 aa20.37■□□□□ 0.85
ATRX-215ENST00000624193 SNED1Q8TER0 1413 aa20.36■□□□□ 0.85
ATRX-215ENST00000624193 FZD9O00144 591 aa20.36■□□□□ 0.85
ATRX-215ENST00000624193 VEGFBP49765 207 aa20.36■□□□□ 0.85
ATRX-215ENST00000624193 NUTM1Q86Y26 1132 aa20.36■□□□□ 0.85
ATRX-215ENST00000624193 CRY2Q49AN0 593 aa20.35■□□□□ 0.85
ATRX-215ENST00000624193 PNMA8AQ86V59 439 aaPredicted RBP20.35■□□□□ 0.85
ATRX-215ENST00000624193 NYXQ9GZU5 481 aa20.35■□□□□ 0.85
ATRX-215ENST00000624193 MAP1SQ66K74 1059 aaPredicted RBP20.34■□□□□ 0.85
ATRX-215ENST00000624193 GPC2Q8N158 579 aa20.34■□□□□ 0.85
ATRX-215ENST00000624193 AIDAQ96BJ3 306 aa20.34■□□□□ 0.85
ATRX-215ENST00000624193 PSMD1Q99460 953 aa20.34■□□□□ 0.85
ATRX-215ENST00000624193 COL4A5P29400 1685 aa20.34■□□□□ 0.85
ATRX-215ENST00000624193 MAP3K15Q6ZN16 1313 aa20.33■□□□□ 0.85
ATRX-215ENST00000624193 ERVV-1B6SEH8 477 aa20.33■□□□□ 0.85
ATRX-215ENST00000624193 JDP2Q8WYK2 163 aa20.33■□□□□ 0.85
ATRX-215ENST00000624193 KIF6Q6ZMV9 814 aa20.32■□□□□ 0.84
ATRX-215ENST00000624193 TTLL7Q6ZT98 887 aa20.32■□□□□ 0.84
ATRX-215ENST00000624193 CNTROBQ8N137 903 aa20.32■□□□□ 0.84
ATRX-215ENST00000624193 RPGRQ92834 1020 aaKnown RBP20.32■□□□□ 0.84
ATRX-215ENST00000624193 PRDM10Q9NQV6 1147 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms