RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 RAB11FIP3O75154 756 aa16.56■□□□□ 0.24
CDH23-214ENST00000622827 KIF5BP33176 963 aa16.56■□□□□ 0.24
CDH23-214ENST00000622827 NOLC1Q14978 699 aaKnown RBP eCLIP16.56■□□□□ 0.24
CDH23-214ENST00000622827 SMC6Q96SB8 1091 aa16.56■□□□□ 0.24
CDH23-214ENST00000622827 SWAP70Q9UH65 585 aa16.56■□□□□ 0.24
CDH23-214ENST00000622827 CCDC129Q6ZRS4 1044 aa16.56■□□□□ 0.24
CDH23-214ENST00000622827 RUSC2Q8N2Y8 1516 aa16.56■□□□□ 0.24
CDH23-214ENST00000622827 ANKRD30BQ9BXX2 1392 aa16.56■□□□□ 0.24
CDH23-214ENST00000622827 SKILP12757 684 aa16.56■□□□□ 0.24
CDH23-214ENST00000622827 PIP4K2BP78356 416 aa16.56■□□□□ 0.24
CDH23-214ENST00000622827 PSMD1Q99460 953 aa16.56■□□□□ 0.24
CDH23-214ENST00000622827 HMGB1P09429 215 aaKnown RBP16.55■□□□□ 0.24
CDH23-214ENST00000622827 KIAA0753Q2KHM9 967 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 RBM5P52756 815 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDH23-214ENST00000622827 MYO1BO43795 1136 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 NLRP6P59044 892 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 GOLIM4O00461 696 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 KIF3CO14782 793 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 GDPD2Q9HCC8 539 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 IL1RAPL2Q9NP60 686 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 SSRP1Q08945 709 aaKnown RBP16.55■□□□□ 0.24
CDH23-214ENST00000622827 C10orf67Q8IYJ2 551 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 CTAGE15A4D2H0 777 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 ZFYP08048 801 aaPredicted RBP16.55■□□□□ 0.24
CDH23-214ENST00000622827 CTAGE8P0CG41 777 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 KLHL40Q2TBA0 621 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 CTAGE6Q86UF2 777 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 CTAGE4Q8IX94 777 aa16.55■□□□□ 0.24
CDH23-214ENST00000622827 SARNPP82979 210 aaKnown RBP16.54■□□□□ 0.24
CDH23-214ENST00000622827 ZNF830Q96NB3 372 aaPredicted RBP16.54■□□□□ 0.24
CDH23-214ENST00000622827 SLC12A7Q9Y666 1083 aa16.54■□□□□ 0.24
CDH23-214ENST00000622827 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
CDH23-214ENST00000622827 SETSIPP0DME0 302 aa16.54■□□□□ 0.24
CDH23-214ENST00000622827 FERMT2Q96AC1 680 aa16.54■□□□□ 0.24
CDH23-214ENST00000622827 EXOC6BQ9Y2D4 811 aa16.54■□□□□ 0.24
CDH23-214ENST00000622827 IDH1O75874 414 aaKnown RBP16.54■□□□□ 0.24
CDH23-214ENST00000622827 SMARCA5O60264 1052 aaPredicted RBP16.54■□□□□ 0.24
CDH23-214ENST00000622827 GLRX3O76003 335 aaKnown RBP16.54■□□□□ 0.24
CDH23-214ENST00000622827 DRC1Q96MC2 740 aa16.54■□□□□ 0.24
CDH23-214ENST00000622827 SELENOOQ9BVL4 669 aa16.54■□□□□ 0.24
CDH23-214ENST00000622827 PLVAPQ9BX97 442 aa16.54■□□□□ 0.24
CDH23-214ENST00000622827 LRSAM1Q6UWE0 723 aa16.53■□□□□ 0.24
CDH23-214ENST00000622827 KIF1BPQ96EK5 621 aa16.53■□□□□ 0.24
CDH23-214ENST00000622827 ATF3P18847 181 aa16.53■□□□□ 0.24
CDH23-214ENST00000622827 A0A1B0GUL7 405 aa16.53■□□□□ 0.24
CDH23-214ENST00000622827 ZNF287Q9HBT7 754 aa16.53■□□□□ 0.24
CDH23-214ENST00000622827 STIM2Q9P246 746 aa16.53■□□□□ 0.24
CDH23-214ENST00000622827 TUBB4BP68371 445 aa16.53■□□□□ 0.24
CDH23-214ENST00000622827 ZEB2O60315 1214 aa16.53■□□□□ 0.24
CDH23-214ENST00000622827 PLCD3Q8N3E9 789 aa16.53■□□□□ 0.24
CDH23-214ENST00000622827 LACTBP83111 547 aaPredicted RBP16.53■□□□□ 0.24
CDH23-214ENST00000622827 NBPF11Q86T75 865 aa16.53■□□□□ 0.24
CDH23-214ENST00000622827 FERMT1Q9BQL6 677 aa16.53■□□□□ 0.24
CDH23-214ENST00000622827 DNAI1Q9UI46 699 aa16.53■□□□□ 0.24
CDH23-214ENST00000622827 GJB2P29033 226 aa16.52■□□□□ 0.24
CDH23-214ENST00000622827 UBASH3AP57075 661 aa16.52■□□□□ 0.24
CDH23-214ENST00000622827 GUCY1B3Q02153 619 aa16.52■□□□□ 0.24
CDH23-214ENST00000622827 SULT6B1Q6IMI4 303 aa16.52■□□□□ 0.24
CDH23-214ENST00000622827 TBC1D5Q92609 795 aa16.52■□□□□ 0.24
CDH23-214ENST00000622827 ANO6Q4KMQ2 910 aa16.52■□□□□ 0.24
CDH23-214ENST00000622827 CFAP58Q5T655 872 aa16.52■□□□□ 0.24
CDH23-214ENST00000622827 CEP126Q9P2H0 1117 aa16.52■□□□□ 0.24
CDH23-214ENST00000622827 FAM76AQ8TAV0 307 aa16.52■□□□□ 0.24
CDH23-214ENST00000622827 PYM1Q9BRP8 204 aaKnown RBP16.52■□□□□ 0.24
CDH23-214ENST00000622827 ACTN2P35609 894 aa16.52■□□□□ 0.23
CDH23-214ENST00000622827 KANK3Q6NY19 840 aa16.52■□□□□ 0.23
CDH23-214ENST00000622827 FAM135AQ9P2D6 1515 aa16.52■□□□□ 0.23
CDH23-214ENST00000622827 A0A1B0GUA9 196 aa16.52■□□□□ 0.23
CDH23-214ENST00000622827 KIF20AO95235 890 aa16.51■□□□□ 0.23
CDH23-214ENST00000622827 B4GALNT4Q76KP1 1039 aa16.51■□□□□ 0.23
CDH23-214ENST00000622827 RAB3IL1Q8TBN0 382 aa16.51■□□□□ 0.23
CDH23-214ENST00000622827 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDH23-214ENST00000622827 N4BP3O15049 544 aa16.51■□□□□ 0.23
CDH23-214ENST00000622827 SAMD15Q9P1V8 674 aa16.51■□□□□ 0.23
CDH23-214ENST00000622827 CTAGE1Q96RT6 745 aa16.51■□□□□ 0.23
CDH23-214ENST00000622827 PTPN23Q9H3S7 1636 aa16.51■□□□□ 0.23
CDH23-214ENST00000622827 CPLX4Q7Z7G2 160 aa16.51■□□□□ 0.23
CDH23-214ENST00000622827 CTCFLQ8NI51 663 aaPredicted RBP16.51■□□□□ 0.23
CDH23-214ENST00000622827 SLU7O95391 586 aaKnown RBP16.51■□□□□ 0.23
CDH23-214ENST00000622827 ZNF530Q6P9A1 599 aaPredicted RBP16.51■□□□□ 0.23
CDH23-214ENST00000622827 TIAM1Q13009 1591 aa16.51■□□□□ 0.23
CDH23-214ENST00000622827 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
CDH23-214ENST00000622827 CWC25Q9NXE8 425 aaPredicted RBP16.5■□□□□ 0.23
CDH23-214ENST00000622827 AKR1B10O60218 316 aa16.5■□□□□ 0.23
CDH23-214ENST00000622827 SELENOSQ9BQE4 189 aa16.5■□□□□ 0.23
CDH23-214ENST00000622827 NAPBQ9H115 298 aa16.5■□□□□ 0.23
CDH23-214ENST00000622827 DNAJC21Q5F1R6 531 aaKnown RBP16.5■□□□□ 0.23
CDH23-214ENST00000622827 TMEM132EQ6IEE7 984 aa16.5■□□□□ 0.23
CDH23-214ENST00000622827 CCDC194A0A1B0GVG4 234 aa16.5■□□□□ 0.23
CDH23-214ENST00000622827 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
CDH23-214ENST00000622827 ATP11AP98196 1134 aa16.5■□□□□ 0.23
CDH23-214ENST00000622827 HDXQ7Z353 690 aa16.5■□□□□ 0.23
CDH23-214ENST00000622827 OGFRQ9NZT2 677 aa16.5■□□□□ 0.23
CDH23-214ENST00000622827 SYT1P21579 422 aa16.5■□□□□ 0.23
CDH23-214ENST00000622827 PSMC4P43686 418 aa16.5■□□□□ 0.23
CDH23-214ENST00000622827 CLNS1AP54105 237 aaKnown RBP16.5■□□□□ 0.23
CDH23-214ENST00000622827 CCT2P78371 535 aaKnown RBP16.5■□□□□ 0.23
CDH23-214ENST00000622827 GIMAP6Q6P9H5 292 aa16.5■□□□□ 0.23
CDH23-214ENST00000622827 SMAP1Q8IYB5 467 aaPredicted RBP16.5■□□□□ 0.23
CDH23-214ENST00000622827 EXOC1Q9NV70 894 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms