RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 NKX1-1Q15270 411 aaPredicted RBP17.11■□□□□ 0.33
EPB42-210ENST00000622454 ESYT1Q9BSJ8 1104 aa17.11■□□□□ 0.33
EPB42-210ENST00000622454 AFDNP55196 1824 aaKnown RBP17.1■□□□□ 0.33
EPB42-210ENST00000622454 NEURL1BA8MQ27 555 aa17.1■□□□□ 0.33
EPB42-210ENST00000622454 CHMLP26374 656 aa17.1■□□□□ 0.33
EPB42-210ENST00000622454 ERC1Q8IUD2 1116 aa17.1■□□□□ 0.33
EPB42-210ENST00000622454 SUCLG2Q96I99 432 aa17.1■□□□□ 0.33
EPB42-210ENST00000622454 ARFGEF2Q9Y6D5 1785 aa17.1■□□□□ 0.33
EPB42-210ENST00000622454 HSP90AA1P07900 732 aaKnown RBP17.09■□□□□ 0.33
EPB42-210ENST00000622454 PIP4K2BP78356 416 aa17.09■□□□□ 0.33
EPB42-210ENST00000622454 GSE1Q14687 1217 aa17.09■□□□□ 0.33
EPB42-210ENST00000622454 KAZALD1Q96I82 304 aa17.09■□□□□ 0.33
EPB42-210ENST00000622454 PHLPP1O60346 1717 aa17.09■□□□□ 0.33
EPB42-210ENST00000622454 COL22A1Q8NFW1 1626 aaPredicted RBP17.09■□□□□ 0.33
EPB42-210ENST00000622454 GCKRQ14397 625 aa17.09■□□□□ 0.33
EPB42-210ENST00000622454 PI4K2BQ8TCG2 481 aa17.09■□□□□ 0.33
EPB42-210ENST00000622454 BICC1Q9H694 974 aaKnown RBP17.09■□□□□ 0.33
EPB42-210ENST00000622454 UNC5CLQ8IV45 518 aa17.08■□□□□ 0.33
EPB42-210ENST00000622454 CLASRPQ8N2M8 674 aaKnown RBP17.08■□□□□ 0.33
EPB42-210ENST00000622454 MYD88Q99836 296 aa17.08■□□□□ 0.33
EPB42-210ENST00000622454 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.33
EPB42-210ENST00000622454 PAPPAQ13219 1627 aa17.08■□□□□ 0.32
EPB42-210ENST00000622454 COL14A1Q05707 1796 aaKnown RBP17.08■□□□□ 0.32
EPB42-210ENST00000622454 ERBB4Q15303 1308 aa17.08■□□□□ 0.32
EPB42-210ENST00000622454 TTC41PQ6P2S7 1318 aa17.08■□□□□ 0.32
EPB42-210ENST00000622454 USP42Q9H9J4 1324 aaKnown RBP17.08■□□□□ 0.32
EPB42-210ENST00000622454 DDX54Q8TDD1 881 aaKnown RBP17.08■□□□□ 0.32
EPB42-210ENST00000622454 TOM1O60784 492 aa17.06■□□□□ 0.32
EPB42-210ENST00000622454 PIP4K2AP48426 406 aaPredicted RBP17.06■□□□□ 0.32
EPB42-210ENST00000622454 PA2G4Q9UQ80 394 aaKnown RBP17.06■□□□□ 0.32
EPB42-210ENST00000622454 ST18O60284 1047 aa17.06■□□□□ 0.32
EPB42-210ENST00000622454 COL16A1Q07092 1604 aaPredicted RBP17.06■□□□□ 0.32
EPB42-210ENST00000622454 GLRX3O76003 335 aaKnown RBP17.05■□□□□ 0.32
EPB42-210ENST00000622454 MCCP23508 829 aa17.05■□□□□ 0.32
EPB42-210ENST00000622454 CNTROBQ8N137 903 aa17.05■□□□□ 0.32
EPB42-210ENST00000622454 PLBD2Q8NHP8 589 aa17.05■□□□□ 0.32
EPB42-210ENST00000622454 KCPQ6ZWJ8 1503 aa17.05■□□□□ 0.32
EPB42-210ENST00000622454 EPB41L2O43491 1005 aaKnown RBP17.04■□□□□ 0.32
EPB42-210ENST00000622454 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
EPB42-210ENST00000622454 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
EPB42-210ENST00000622454 ANO2Q9NQ90 1003 aa17.04■□□□□ 0.32
EPB42-210ENST00000622454 ADAMTS2O95450 1211 aa17.04■□□□□ 0.32
EPB42-210ENST00000622454 MCM4P33991 863 aa17.04■□□□□ 0.32
EPB42-210ENST00000622454 IFIT2P09913 472 aaKnown RBP17.03■□□□□ 0.32
EPB42-210ENST00000622454 ECHDC1Q9NTX5 307 aa17.03■□□□□ 0.32
EPB42-210ENST00000622454 MAP4K4O95819 1239 aaPredicted RBP17.02■□□□□ 0.32
EPB42-210ENST00000622454 TOGARAM1Q9Y4F4 1720 aa17.02■□□□□ 0.32
EPB42-210ENST00000622454 COL15A1P39059 1388 aa17.02■□□□□ 0.32
EPB42-210ENST00000622454 NBPF26B4DH59 902 aa17.02■□□□□ 0.32
EPB42-210ENST00000622454 ANAPC15P60006 121 aa17.02■□□□□ 0.32
EPB42-210ENST00000622454 NBPF14Q5TI25 921 aa17.02■□□□□ 0.32
EPB42-210ENST00000622454 NBPF10Q6P3W6 841 aaKnown RBP17.02■□□□□ 0.32
EPB42-210ENST00000622454 NBPF15Q8N660 670 aa17.02■□□□□ 0.32
EPB42-210ENST00000622454 NUP188Q5SRE5 1749 aa17.02■□□□□ 0.31
EPB42-210ENST00000622454 TNS2Q63HR2 1409 aa17.02■□□□□ 0.31
EPB42-210ENST00000622454 SASH1O94885 1247 aa17.01■□□□□ 0.31
EPB42-210ENST00000622454 AACSQ86V21 672 aa17.01■□□□□ 0.31
EPB42-210ENST00000622454 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
EPB42-210ENST00000622454 RAB3GAP1Q15042 981 aa17.01■□□□□ 0.31
EPB42-210ENST00000622454 NUTM2BA6NNL0 878 aaPredicted RBP17■□□□□ 0.31
EPB42-210ENST00000622454 NUTM2EB1AL46 878 aaPredicted RBP17■□□□□ 0.31
EPB42-210ENST00000622454 UBAP1LF5GYI3 381 aa17■□□□□ 0.31
EPB42-210ENST00000622454 PTCD1O75127 700 aaKnown RBP17■□□□□ 0.31
EPB42-210ENST00000622454 EPHA10Q5JZY3 1008 aa17■□□□□ 0.31
EPB42-210ENST00000622454 UBE3BQ7Z3V4 1068 aa17■□□□□ 0.31
EPB42-210ENST00000622454 NUTM2AQ8IVF1 878 aaPredicted RBP17■□□□□ 0.31
EPB42-210ENST00000622454 A0A087WZG4 1122 aa17■□□□□ 0.31
EPB42-210ENST00000622454 ATP5J2-PTCD1G3V325 749 aa17■□□□□ 0.31
EPB42-210ENST00000622454 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
EPB42-210ENST00000622454 SGSM2O43147 1006 aa16.99■□□□□ 0.31
EPB42-210ENST00000622454 SIL1Q9H173 461 aa16.99■□□□□ 0.31
EPB42-210ENST00000622454 PLCH1Q4KWH8 1693 aa16.99■□□□□ 0.31
EPB42-210ENST00000622454 RABL6Q3YEC7 729 aaPredicted RBP16.98■□□□□ 0.31
EPB42-210ENST00000622454 TNPO1Q92973 898 aaKnown RBP16.98■□□□□ 0.31
EPB42-210ENST00000622454 IL17RAQ96F46 866 aa16.98■□□□□ 0.31
EPB42-210ENST00000622454 IL25Q9H293 177 aa16.98■□□□□ 0.31
EPB42-210ENST00000622454 A1BGP04217 495 aa16.98■□□□□ 0.31
EPB42-210ENST00000622454 NEK4P51957 841 aa16.98■□□□□ 0.31
EPB42-210ENST00000622454 EAF2Q96CJ1 260 aaPredicted RBP16.98■□□□□ 0.31
EPB42-210ENST00000622454 COPRSQ9NQ92 184 aa16.98■□□□□ 0.31
EPB42-210ENST00000622454 ITGB4P16144 1822 aa16.98■□□□□ 0.31
EPB42-210ENST00000622454 DDX11L8A8MPP1 907 aa16.97■□□□□ 0.31
EPB42-210ENST00000622454 KLHDC4Q8TBB5 520 aa16.97■□□□□ 0.31
EPB42-210ENST00000622454 PALD1Q9ULE6 856 aa16.97■□□□□ 0.31
EPB42-210ENST00000622454 MCM2P49736 904 aa16.97■□□□□ 0.31
EPB42-210ENST00000622454 CASP7P55210 303 aa16.97■□□□□ 0.31
EPB42-210ENST00000622454 JARID2Q92833 1246 aaPredicted RBP16.97■□□□□ 0.31
EPB42-210ENST00000622454 GBP4Q96PP9 640 aa16.97■□□□□ 0.31
EPB42-210ENST00000622454 DISP2A7MBM2 1401 aa16.97■□□□□ 0.31
EPB42-210ENST00000622454 HSPA4P34932 840 aa16.96■□□□□ 0.31
EPB42-210ENST00000622454 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.31
EPB42-210ENST00000622454 IL27Q8NEV9 243 aa16.96■□□□□ 0.31
EPB42-210ENST00000622454 RUFY2Q8WXA3 655 aa16.96■□□□□ 0.31
EPB42-210ENST00000622454 EVI5LQ96CN4 794 aa16.96■□□□□ 0.31
EPB42-210ENST00000622454 DIAPH3Q9NSV4 1193 aa16.96■□□□□ 0.31
EPB42-210ENST00000622454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.96■□□□□ 0.31
EPB42-210ENST00000622454 RFX5P48382 616 aaPredicted RBP16.96■□□□□ 0.3
EPB42-210ENST00000622454 CWC27Q6UX04 472 aaKnown RBP16.96■□□□□ 0.3
EPB42-210ENST00000622454 CWC22Q9HCG8 908 aaKnown RBP16.96■□□□□ 0.3
EPB42-210ENST00000622454 RAD50Q92878 1312 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms