RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 CCDC61Q9Y6R9 512 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 RTL1A6NKG5 1358 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 ROBO2Q9HCK4 1378 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 FAM69CQ0P6D2 419 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 FBXO38Q6PIJ6 1188 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 C10orf67Q8IYJ2 551 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 IQUBQ8NA54 791 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 ZDHHC9Q9Y397 364 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 PLEKHG2Q9H7P9 1386 aa8.9□□□□□ -0.98
TRIM49B-202ENST00000622138 TOPAZ1Q8N9V7 1692 aa8.9□□□□□ -0.99
TRIM49B-202ENST00000622138 PTPRCP08575 1304 aa8.9□□□□□ -0.99
TRIM49B-202ENST00000622138 OVOS2A0A0J9YW53 1432 aa8.9□□□□□ -0.99
TRIM49B-202ENST00000622138 OVOS2Q6IE36 1432 aa8.9□□□□□ -0.99
TRIM49B-202ENST00000622138 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.9□□□□□ -0.99
TRIM49B-202ENST00000622138 CHL1O00533 1208 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 TNNT1P13805 278 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 PKP1Q13835 747 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 TTC31Q49AM3 519 aaPredicted RBP8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 SWT1Q5T5J6 900 aaKnown RBP8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 CCDC183Q5T5S1 534 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 SUGP1Q8IWZ8 645 aaKnown RBP8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 DEF6Q9H4E7 631 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 V9GYY5 206 aaPredicted RBP8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 NALCNQ8IZF0 1738 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 CRB1P82279 1406 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 SDSP20132 328 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 CYB5RLQ6IPT4 315 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 KRBA2Q6ZNG9 492 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 USP26Q9BXU7 913 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 TMX1Q9H3N1 280 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 MIS18AQ9NYP9 233 aa8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.89□□□□□ -0.99
TRIM49B-202ENST00000622138 NUTM2FA1L443 756 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 FOXO3O43524 673 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 ST18O60284 1047 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 GSCP56915 257 aaPredicted RBP8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 HSP90AB2PQ58FF8 381 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 GOLGA5Q8TBA6 731 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 CXorf56Q9H5V9 222 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 RBM28Q9NW13 759 aaKnown RBP8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 TTC21BQ7Z4L5 1316 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 ZSCAN26Q16670 478 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 TSGA10IPQ3SY00 556 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 EP400NLQ6ZTU2 488 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 G2E3Q7L622 706 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 RPAINQ86UA6 219 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 CCDC191Q8NCU4 936 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 ST7Q9NRC1 585 aa8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 RRP15Q9Y3B9 282 aaKnown RBP8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 LRRFIP2Q9Y608 721 aaKnown RBP8.88□□□□□ -0.99
TRIM49B-202ENST00000622138 CCDC171Q6TFL3 1326 aa8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 KIAA0232Q92628 1395 aa8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 H2AFXP16104 143 aaPredicted RBP8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 MAGEA9P43362 315 aa8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 TDO2P48775 406 aa8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 TICAM2Q86XR7 235 aa8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 MPNDQ8N594 471 aa8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 GPATCH11Q8N954 259 aa8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 TMEM87AQ8NBN3 555 aa8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 FBXO18Q8NFZ0 1043 aa8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 NEK11Q8NG66 645 aa8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 CHAMP1Q96JM3 812 aa8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 C16orf45Q96MC5 204 aaPredicted RBP8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 PSD3Q9NYI0 1048 aa8.87□□□□□ -0.99
TRIM49B-202ENST00000622138 ADAMTS13Q76LX8 1427 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 F6X3S4 739 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 TULP1O00294 542 aaPredicted RBP8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 TRIM66O15016 1216 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 ATP8B1O43520 1251 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 BRD1O95696 1058 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 CALRP27797 417 aaKnown RBP8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 GYS2P54840 703 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 TRDNQ13061 729 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 TSHZ3Q63HK5 1081 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 ZGPATQ8N5A5 531 aaKnown RBP8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 FBXO3Q9UK99 471 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 PPP6R1Q9UPN7 881 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 ACEP12821 1306 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 MAP3K19Q56UN5 1328 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 USP6P35125 1406 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 HCLS1P14317 486 aaPredicted RBP8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 MAP2K1Q02750 393 aaPredicted RBP8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 NAA30Q147X3 362 aaPredicted RBP8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 CEP135Q66GS9 1140 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 TMED8Q6PL24 325 aaPredicted RBP8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 RPAP2Q8IXW5 612 aaPredicted RBP8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 FHOD1Q9Y613 1164 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 FMN2Q9NZ56 1722 aa8.86□□□□□ -0.99
TRIM49B-202ENST00000622138 TUBGCP6Q96RT7 1819 aa8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 UBR1Q8IWV7 1749 aa8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 SLC4A2P04920 1241 aa8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 MCTP2Q6DN12 878 aa8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 DRC1Q96MC2 740 aa8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 CEP170BQ9Y4F5 1589 aaPredicted RBP8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 SLU7O95391 586 aaKnown RBP8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 IVLP07476 585 aa8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 PNMA6AP0CW24 399 aaPredicted RBP8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 MX1P20591 662 aa8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 ATP6V1AP38606 617 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms