RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 RTN4Q9NQC3 1192 aaKnown RBP21.49■■□□□ 1.03
FAM3A-222ENST00000621967 SOS1Q07889 1333 aaPredicted RBP21.48■■□□□ 1.03
FAM3A-222ENST00000621967 FSD2A1L4K1 749 aa21.48■■□□□ 1.03
FAM3A-222ENST00000621967 HOXB7P09629 217 aa21.48■■□□□ 1.03
FAM3A-222ENST00000621967 C16orf71Q8IYS4 520 aaPredicted RBP21.48■■□□□ 1.03
FAM3A-222ENST00000621967 LOC102724428A0A0B4J2F2 783 aa21.47■■□□□ 1.03
FAM3A-222ENST00000621967 TRAK2O60296 914 aa21.47■■□□□ 1.03
FAM3A-222ENST00000621967 CCT4P50991 539 aaKnown RBP21.47■■□□□ 1.03
FAM3A-222ENST00000621967 SIK1P57059 783 aa21.47■■□□□ 1.03
FAM3A-222ENST00000621967 VSIG10Q8N0Z9 540 aa21.47■■□□□ 1.03
FAM3A-222ENST00000621967 C5P01031 1676 aa21.47■■□□□ 1.03
FAM3A-222ENST00000621967 TNS1Q9HBL0 1735 aaKnown RBP21.47■■□□□ 1.03
FAM3A-222ENST00000621967 RAB3GAP1Q15042 981 aa21.47■■□□□ 1.03
FAM3A-222ENST00000621967 G2E3Q7L622 706 aa21.47■■□□□ 1.03
FAM3A-222ENST00000621967 PRAMEF22A3QJZ6 481 aa21.46■■□□□ 1.03
FAM3A-222ENST00000621967 APBA3O96018 575 aa21.46■■□□□ 1.03
FAM3A-222ENST00000621967 EIF2S2P20042 333 aaKnown RBP21.45■■□□□ 1.02
FAM3A-222ENST00000621967 ATP6V1AP38606 617 aa21.45■■□□□ 1.02
FAM3A-222ENST00000621967 HDGFL1Q5TGJ6 251 aa21.45■■□□□ 1.02
FAM3A-222ENST00000621967 OTUD7AQ8TE49 926 aaPredicted RBP21.45■■□□□ 1.02
FAM3A-222ENST00000621967 AK9Q5TCS8 1911 aa21.45■■□□□ 1.02
FAM3A-222ENST00000621967 LAMB4A4D0S4 1761 aa21.45■■□□□ 1.02
FAM3A-222ENST00000621967 HMMRO75330 724 aa21.45■■□□□ 1.02
FAM3A-222ENST00000621967 TNPO1Q92973 898 aaKnown RBP21.45■■□□□ 1.02
FAM3A-222ENST00000621967 CHMP4AQ9BY43 222 aa21.45■■□□□ 1.02
FAM3A-222ENST00000621967 LY75O60449 1722 aa21.44■■□□□ 1.02
FAM3A-222ENST00000621967 SF3B2Q13435 895 aaKnown RBP21.44■■□□□ 1.02
FAM3A-222ENST00000621967 NECTIN2Q92692 538 aa21.44■■□□□ 1.02
FAM3A-222ENST00000621967 TEX13AQ9BXU3 409 aaPredicted RBP21.44■■□□□ 1.02
FAM3A-222ENST00000621967 RABEP1Q15276 862 aa21.43■■□□□ 1.02
FAM3A-222ENST00000621967 SLC4A9Q96Q91 983 aa21.43■■□□□ 1.02
FAM3A-222ENST00000621967 USP26Q9BXU7 913 aa21.43■■□□□ 1.02
FAM3A-222ENST00000621967 DNAJC10Q8IXB1 793 aa21.43■■□□□ 1.02
FAM3A-222ENST00000621967 CCNL1Q9UK58 526 aaPredicted RBP21.43■■□□□ 1.02
FAM3A-222ENST00000621967 PXDNLA1KZ92 1463 aa21.42■■□□□ 1.02
FAM3A-222ENST00000621967 TJP1Q07157 1748 aa21.42■■□□□ 1.02
FAM3A-222ENST00000621967 SMARCA5O60264 1052 aaPredicted RBP21.42■■□□□ 1.02
FAM3A-222ENST00000621967 SDSP20132 328 aa21.42■■□□□ 1.02
FAM3A-222ENST00000621967 CCDC30Q5VVM6 783 aa21.42■■□□□ 1.02
FAM3A-222ENST00000621967 OSBPL3Q9H4L5 887 aa21.42■■□□□ 1.02
FAM3A-222ENST00000621967 F6X3S4 739 aa21.41■■□□□ 1.02
FAM3A-222ENST00000621967 STARD3NLO95772 234 aa21.41■■□□□ 1.02
FAM3A-222ENST00000621967 STK31Q9BXU1 1019 aa21.41■■□□□ 1.02
FAM3A-222ENST00000621967 USP16Q9Y5T5 823 aa21.41■■□□□ 1.02
FAM3A-222ENST00000621967 ZNF831Q5JPB2 1677 aa21.41■■□□□ 1.02
FAM3A-222ENST00000621967 GOLGA6L3A6NEY3 463 aa21.41■■□□□ 1.02
FAM3A-222ENST00000621967 GBP4Q96PP9 640 aa21.41■■□□□ 1.02
FAM3A-222ENST00000621967 CICQ96RK0 1608 aaPredicted RBP21.41■■□□□ 1.02
FAM3A-222ENST00000621967 PLSCR1O15162 318 aa21.4■■□□□ 1.02
FAM3A-222ENST00000621967 SLC4A10Q6U841 1118 aa21.39■■□□□ 1.02
FAM3A-222ENST00000621967 GNAI2P04899 355 aa21.39■■□□□ 1.01
FAM3A-222ENST00000621967 KCNQ4P56696 695 aa21.39■■□□□ 1.01
FAM3A-222ENST00000621967 ITPK1Q13572 414 aa21.39■■□□□ 1.01
FAM3A-222ENST00000621967 FAM43AQ8N2R8 423 aa21.39■■□□□ 1.01
FAM3A-222ENST00000621967 RGPD3A6NKT7 1758 aaPredicted RBP21.38■■□□□ 1.01
FAM3A-222ENST00000621967 RGPD4Q7Z3J3 1758 aa21.38■■□□□ 1.01
FAM3A-222ENST00000621967 HSP90AA1P07900 732 aaKnown RBP21.38■■□□□ 1.01
FAM3A-222ENST00000621967 FLIIQ13045 1269 aa21.38■■□□□ 1.01
FAM3A-222ENST00000621967 SLC27A3Q5K4L6 730 aa21.38■■□□□ 1.01
FAM3A-222ENST00000621967 CASC1Q6TDU7 716 aa21.38■■□□□ 1.01
FAM3A-222ENST00000621967 CLEC17AQ6ZS10 378 aa21.38■■□□□ 1.01
FAM3A-222ENST00000621967 PTMSP20962 102 aa21.37■■□□□ 1.01
FAM3A-222ENST00000621967 BAG6P46379 1132 aa21.37■■□□□ 1.01
FAM3A-222ENST00000621967 CHPF2Q9P2E5 772 aa21.37■■□□□ 1.01
FAM3A-222ENST00000621967 SALL3Q9BXA9 1300 aa21.37■■□□□ 1.01
FAM3A-222ENST00000621967 XRCC6P12956 609 aaKnown RBP eCLIP21.37■■□□□ 1.01
FAM3A-222ENST00000621967 TXNRD1Q16881 649 aa21.37■■□□□ 1.01
FAM3A-222ENST00000621967 CCDC125Q86Z20 511 aa21.37■■□□□ 1.01
FAM3A-222ENST00000621967 GZF1Q9H116 711 aaPredicted RBP21.37■■□□□ 1.01
FAM3A-222ENST00000621967 DBF4Q9UBU7 674 aaPredicted RBP21.37■■□□□ 1.01
FAM3A-222ENST00000621967 COL5A3P25940 1745 aaPredicted RBP21.36■■□□□ 1.01
FAM3A-222ENST00000621967 APBB1O00213 710 aa21.36■■□□□ 1.01
FAM3A-222ENST00000621967 CYP19A1P11511 503 aaPredicted RBP21.36■■□□□ 1.01
FAM3A-222ENST00000621967 ISY1Q9ULR0 285 aaKnown RBP21.36■■□□□ 1.01
FAM3A-222ENST00000621967 ERBB4Q15303 1308 aa21.36■■□□□ 1.01
FAM3A-222ENST00000621967 GNAI3P08754 354 aa21.35■■□□□ 1.01
FAM3A-222ENST00000621967 PDE1AP54750 535 aa21.35■■□□□ 1.01
FAM3A-222ENST00000621967 A1BGP04217 495 aa21.35■■□□□ 1.01
FAM3A-222ENST00000621967 LINC00116Q8NCU8 138 aa21.35■■□□□ 1.01
FAM3A-222ENST00000621967 REC8O95072 547 aa21.34■■□□□ 1.01
FAM3A-222ENST00000621967 EN1Q05925 392 aaPredicted RBP21.34■■□□□ 1.01
FAM3A-222ENST00000621967 DDX21Q9NR30 783 aaKnown RBP eCLIP21.34■■□□□ 1.01
FAM3A-222ENST00000621967 LRRC4BQ9NT99 713 aa21.34■■□□□ 1.01
FAM3A-222ENST00000621967 TAF1LQ8IZX4 1826 aa21.34■■□□□ 1.01
FAM3A-222ENST00000621967 MYL6BP14649 208 aa21.33■■□□□ 1.01
FAM3A-222ENST00000621967 HMGB2P26583 209 aaKnown RBP21.33■■□□□ 1.01
FAM3A-222ENST00000621967 CRKLP46109 303 aaKnown RBP21.33■■□□□ 1.01
FAM3A-222ENST00000621967 PIP4K2AP48426 406 aaPredicted RBP21.33■■□□□ 1.01
FAM3A-222ENST00000621967 FKBP5Q13451 457 aaPredicted RBP21.33■■□□□ 1.01
FAM3A-222ENST00000621967 SKOR2Q2VWA4 1001 aaPredicted RBP21.33■■□□□ 1.01
FAM3A-222ENST00000621967 ANXA1P04083 346 aa21.33■■□□□ 1
FAM3A-222ENST00000621967 FOXD4L1Q9NU39 408 aa21.33■■□□□ 1
FAM3A-222ENST00000621967 CCDC87Q9NVE4 849 aa21.33■■□□□ 1
FAM3A-222ENST00000621967 ERC2O15083 957 aa21.32■■□□□ 1
FAM3A-222ENST00000621967 ATP8B2P98198 1209 aa21.32■■□□□ 1
FAM3A-222ENST00000621967 PROSER3Q2NL68 480 aa21.32■■□□□ 1
FAM3A-222ENST00000621967 PROM2Q8N271 834 aa21.32■■□□□ 1
FAM3A-222ENST00000621967 IBTKQ9P2D0 1353 aaPredicted RBP21.32■■□□□ 1
FAM3A-222ENST00000621967 MRE11P49959 708 aa21.31■■□□□ 1
FAM3A-222ENST00000621967 ILDR2Q71H61 639 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms