RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CHMP3Q9Y3E7 222 aa9.2□□□□□ -0.94
BRCA1-229ENST00000621897 GJA3Q9Y6H8 435 aa9.2□□□□□ -0.94
BRCA1-229ENST00000621897 FAM157BP0CG42 384 aa9.19□□□□□ -0.94
BRCA1-229ENST00000621897 BMP4P12644 408 aa9.19□□□□□ -0.94
BRCA1-229ENST00000621897 CD33P20138 364 aa9.19□□□□□ -0.94
BRCA1-229ENST00000621897 MAP2K3P46734 347 aa9.19□□□□□ -0.94
BRCA1-229ENST00000621897 SAMD5Q5TGI4 173 aa9.19□□□□□ -0.94
BRCA1-229ENST00000621897 C14orf37Q86TY3 774 aa9.19□□□□□ -0.94
BRCA1-229ENST00000621897 ALDH16A1Q8IZ83 802 aa9.19□□□□□ -0.94
BRCA1-229ENST00000621897 STAG2Q8N3U4 1231 aa9.19□□□□□ -0.94
BRCA1-229ENST00000621897 FAM200AQ8TCP9 573 aa9.19□□□□□ -0.94
BRCA1-229ENST00000621897 C1orf115Q9H7X2 142 aa9.19□□□□□ -0.94
BRCA1-229ENST00000621897 STRN4Q9NRL3 753 aa9.19□□□□□ -0.94
BRCA1-229ENST00000621897 BCRP11274 1271 aa9.18□□□□□ -0.94
BRCA1-229ENST00000621897 IGFBP4P22692 258 aa9.18□□□□□ -0.94
BRCA1-229ENST00000621897 C1orf53Q5VUE5 145 aa9.18□□□□□ -0.94
BRCA1-229ENST00000621897 CCDC97Q96F63 343 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-229ENST00000621897 OXCT2Q9BYC2 517 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-229ENST00000621897 EFSO43281 561 aa9.17□□□□□ -0.94
BRCA1-229ENST00000621897 MAP3K10Q02779 954 aa9.17□□□□□ -0.94
BRCA1-229ENST00000621897 C1orf229Q6ZS94 237 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-229ENST00000621897 ZNF280CQ8ND82 737 aa9.17□□□□□ -0.94
BRCA1-229ENST00000621897 STK32AQ8WU08 396 aa9.17□□□□□ -0.94
BRCA1-229ENST00000621897 NGLY1Q96IV0 654 aa9.17□□□□□ -0.94
BRCA1-229ENST00000621897 GPC6Q9Y625 555 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-229ENST00000621897 WEE1P30291 646 aa9.16□□□□□ -0.94
BRCA1-229ENST00000621897 CCDC82Q8N4S0 544 aa9.16□□□□□ -0.94
BRCA1-229ENST00000621897 SERPINA10Q9UK55 444 aa9.16□□□□□ -0.94
BRCA1-229ENST00000621897 OIP5O43482 229 aa9.15□□□□□ -0.94
BRCA1-229ENST00000621897 ELOAQ14241 798 aaKnown RBP9.15□□□□□ -0.94
BRCA1-229ENST00000621897 GRIN2CQ14957 1233 aa9.15□□□□□ -0.94
BRCA1-229ENST00000621897 SHISA8B8ZZ34 492 aa9.14□□□□□ -0.95
BRCA1-229ENST00000621897 ATG7O95352 703 aa9.14□□□□□ -0.95
BRCA1-229ENST00000621897 FAM69CQ0P6D2 419 aa9.14□□□□□ -0.95
BRCA1-229ENST00000621897 FAM182BQ5T319 152 aa9.14□□□□□ -0.95
BRCA1-229ENST00000621897 SUSD3Q96L08 255 aa9.14□□□□□ -0.95
BRCA1-229ENST00000621897 NEUROD4Q9HD90 331 aa9.14□□□□□ -0.95
BRCA1-229ENST00000621897 GGA1Q9UJY5 639 aa9.14□□□□□ -0.95
BRCA1-229ENST00000621897 GSK3AP49840 483 aa9.13□□□□□ -0.95
BRCA1-229ENST00000621897 SFSWAPQ12872 951 aaKnown RBP9.13□□□□□ -0.95
BRCA1-229ENST00000621897 PBXIP1Q96AQ6 731 aa9.13□□□□□ -0.95
BRCA1-229ENST00000621897 MARK1Q9P0L2 795 aa9.13□□□□□ -0.95
BRCA1-229ENST00000621897 KLF15Q9UIH9 416 aa9.13□□□□□ -0.95
BRCA1-229ENST00000621897 ACIN1Q9UKV3 1341 aaKnown RBP9.12□□□□□ -0.95
BRCA1-229ENST00000621897 TYRO3Q06418 890 aa9.12□□□□□ -0.95
BRCA1-229ENST00000621897 GOLGA6L1Q8N7Z2 621 aa9.12□□□□□ -0.95
BRCA1-229ENST00000621897 GALNT6Q8NCL4 622 aa9.12□□□□□ -0.95
BRCA1-229ENST00000621897 PRIMPOLQ96LW4 560 aa9.12□□□□□ -0.95
BRCA1-229ENST00000621897 GDF2Q9UK05 429 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-229ENST00000621897 NEURL1BA8MQ27 555 aa9.11□□□□□ -0.95
BRCA1-229ENST00000621897 FOXO3O43524 673 aa9.11□□□□□ -0.95
BRCA1-229ENST00000621897 PRMT3O60678 531 aa9.11□□□□□ -0.95
BRCA1-229ENST00000621897 ARAFP10398 606 aa9.11□□□□□ -0.95
BRCA1-229ENST00000621897 RTN1Q16799 776 aa9.11□□□□□ -0.95
BRCA1-229ENST00000621897 TMEM164Q5U3C3 297 aa9.11□□□□□ -0.95
BRCA1-229ENST00000621897 SLCO4C1Q6ZQN7 724 aa9.11□□□□□ -0.95
BRCA1-229ENST00000621897 NEDD1Q8NHV4 660 aa9.11□□□□□ -0.95
BRCA1-229ENST00000621897 ENAMQ9NRM1 1142 aa9.11□□□□□ -0.95
BRCA1-229ENST00000621897 BCS1LQ9Y276 419 aa9.11□□□□□ -0.95
BRCA1-229ENST00000621897 MARSP56192 900 aaKnown RBP9.1□□□□□ -0.95
BRCA1-229ENST00000621897 FKBP5Q13451 457 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-229ENST00000621897 LAMC2Q13753 1193 aa9.1□□□□□ -0.95
BRCA1-229ENST00000621897 SWI5Q1ZZU3 235 aa9.1□□□□□ -0.95
BRCA1-229ENST00000621897 EDARADDQ8WWZ3 215 aa9.1□□□□□ -0.95
BRCA1-229ENST00000621897 CEP63Q96MT8 703 aa9.1□□□□□ -0.95
BRCA1-229ENST00000621897 QTRT2Q9H974 415 aaKnown RBP9.1□□□□□ -0.95
BRCA1-229ENST00000621897 LRRC4BQ9NT99 713 aa9.1□□□□□ -0.95
BRCA1-229ENST00000621897 ANKIB1Q9P2G1 1089 aa9.1□□□□□ -0.95
BRCA1-229ENST00000621897 DNMT3AQ9Y6K1 912 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-229ENST00000621897 PCBP4P57723 403 aaKnown RBP9.09□□□□□ -0.95
BRCA1-229ENST00000621897 KCNMA1Q12791 1236 aa9.09□□□□□ -0.95
BRCA1-229ENST00000621897 OCLNQ16625 522 aa9.09□□□□□ -0.95
BRCA1-229ENST00000621897 SLC30A3Q99726 388 aa9.09□□□□□ -0.95
BRCA1-229ENST00000621897 BRD7Q9NPI1 651 aa9.09□□□□□ -0.95
BRCA1-229ENST00000621897 KLK14Q9P0G3 267 aa9.09□□□□□ -0.95
BRCA1-229ENST00000621897 ZNF468Q5VIY5 522 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-229ENST00000621897 BTLAQ7Z6A9 289 aa9.08□□□□□ -0.96
BRCA1-229ENST00000621897 FCHSD1Q86WN1 690 aa9.08□□□□□ -0.96
BRCA1-229ENST00000621897 SLAIN2Q9P270 581 aa9.08□□□□□ -0.96
BRCA1-229ENST00000621897 PRR12Q9ULL5 1215 aa9.08□□□□□ -0.96
BRCA1-229ENST00000621897 CNTNAP5Q8WYK1 1306 aa9.07□□□□□ -0.96
BRCA1-229ENST00000621897 EPXP11678 715 aa9.07□□□□□ -0.96
BRCA1-229ENST00000621897 SNRPNP63162 240 aaKnown RBP9.07□□□□□ -0.96
BRCA1-229ENST00000621897 DMGDHQ9UI17 866 aaKnown RBP9.07□□□□□ -0.96
BRCA1-229ENST00000621897 TGFBR3LH3BV60 316 aa9.06□□□□□ -0.96
BRCA1-229ENST00000621897 HOXB4P17483 251 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-229ENST00000621897 ADH6P28332 368 aa9.06□□□□□ -0.96
BRCA1-229ENST00000621897 IRS1P35568 1242 aa9.06□□□□□ -0.96
BRCA1-229ENST00000621897 DGKZQ13574 1117 aa9.06□□□□□ -0.96
BRCA1-229ENST00000621897 RAB44Q7Z6P3 723 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-229ENST00000621897 AVENQ9NQS1 362 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-229ENST00000621897 LRFN2Q9ULH4 789 aa9.06□□□□□ -0.96
BRCA1-229ENST00000621897 KCNQ4P56696 695 aa9.05□□□□□ -0.96
BRCA1-229ENST00000621897 SPEM2Q0P670 501 aa9.05□□□□□ -0.96
BRCA1-229ENST00000621897 IER5Q5VY09 327 aa9.05□□□□□ -0.96
BRCA1-229ENST00000621897 CAPN12Q6ZSI9 719 aa9.05□□□□□ -0.96
BRCA1-229ENST00000621897 SYT9Q86SS6 491 aa9.05□□□□□ -0.96
BRCA1-229ENST00000621897 VTI1AQ96AJ9 217 aa9.05□□□□□ -0.96
BRCA1-229ENST00000621897 SCARF2Q96GP6 870 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-229ENST00000621897 MYO19Q96H55 970 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms