RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 UACAQ9BZF9 1416 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 PPP1R12BO60237 982 aaPredicted RBP13.33□□□□□ -0.28
CLTC-215ENST00000621829 PSMC4P43686 418 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 PPARDQ03181 441 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 SYT10Q6XYQ8 523 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 RPUSD2Q8IZ73 545 aaKnown RBP13.33□□□□□ -0.28
CLTC-215ENST00000621829 SMC6Q96SB8 1091 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 STIM2Q9P246 746 aa13.33□□□□□ -0.28
CLTC-215ENST00000621829 PEX19P40855 299 aa13.32□□□□□ -0.28
CLTC-215ENST00000621829 STX6O43752 255 aa13.32□□□□□ -0.28
CLTC-215ENST00000621829 C8orf76Q96K31 380 aa13.32□□□□□ -0.28
CLTC-215ENST00000621829 MRVI1Q9Y6F6 885 aa13.32□□□□□ -0.28
CLTC-215ENST00000621829 KIAA0753Q2KHM9 967 aa13.32□□□□□ -0.28
CLTC-215ENST00000621829 RAB3IL1Q8TBN0 382 aa13.32□□□□□ -0.28
CLTC-215ENST00000621829 AFAP1L1Q8TED9 768 aa13.32□□□□□ -0.28
CLTC-215ENST00000621829 PIP4K2BP78356 416 aa13.32□□□□□ -0.28
CLTC-215ENST00000621829 B4GALNT4Q76KP1 1039 aa13.32□□□□□ -0.28
CLTC-215ENST00000621829 WASF1Q92558 559 aa13.32□□□□□ -0.28
CLTC-215ENST00000621829 WASHC2CQ9Y4E1 1318 aa13.31□□□□□ -0.28
CLTC-215ENST00000621829 IFT81Q8WYA0 676 aa13.31□□□□□ -0.28
CLTC-215ENST00000621829 SPINK5Q9NQ38 1064 aaPredicted RBP13.31□□□□□ -0.28
CLTC-215ENST00000621829 CNNM1Q9NRU3 951 aa13.31□□□□□ -0.28
CLTC-215ENST00000621829 FRMD3A2A2Y4 597 aa13.31□□□□□ -0.28
CLTC-215ENST00000621829 ZNF853P0CG23 659 aa13.31□□□□□ -0.28
CLTC-215ENST00000621829 CCT4P50991 539 aaKnown RBP13.31□□□□□ -0.28
CLTC-215ENST00000621829 KARSQ15046 597 aaKnown RBP13.31□□□□□ -0.28
CLTC-215ENST00000621829 TTC16Q8NEE8 873 aa13.31□□□□□ -0.28
CLTC-215ENST00000621829 STMN2Q93045 179 aa13.31□□□□□ -0.28
CLTC-215ENST00000621829 SYT1P21579 422 aa13.31□□□□□ -0.28
CLTC-215ENST00000621829 SAMD15Q9P1V8 674 aa13.31□□□□□ -0.28
CLTC-215ENST00000621829 LUC7L2Q9Y383 392 aaKnown RBP13.31□□□□□ -0.28
CLTC-215ENST00000621829 CNPY2Q9Y2B0 182 aa13.31□□□□□ -0.28
CLTC-215ENST00000621829 TPD52P55327 224 aaPredicted RBP13.3□□□□□ -0.28
CLTC-215ENST00000621829 EHBP1Q8NDI1 1231 aa13.3□□□□□ -0.28
CLTC-215ENST00000621829 SEC62Q99442 399 aaKnown RBP13.3□□□□□ -0.28
CLTC-215ENST00000621829 GBP1P32455 592 aa13.3□□□□□ -0.28
CLTC-215ENST00000621829 CCT2P78371 535 aaKnown RBP13.3□□□□□ -0.28
CLTC-215ENST00000621829 AP1ARQ63HQ0 302 aa13.3□□□□□ -0.28
CLTC-215ENST00000621829 CEP128Q6ZU80 1094 aa13.3□□□□□ -0.28
CLTC-215ENST00000621829 NACAP1Q9BZK3 213 aa13.3□□□□□ -0.28
CLTC-215ENST00000621829 FLIIQ13045 1269 aa13.3□□□□□ -0.28
CLTC-215ENST00000621829 PNISRQ8TF01 805 aaKnown RBP13.3□□□□□ -0.28
CLTC-215ENST00000621829 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
CLTC-215ENST00000621829 SPTY2D1Q68D10 685 aaPredicted RBP13.3□□□□□ -0.28
CLTC-215ENST00000621829 FGFR1OPO95684 399 aaKnown RBP13.3□□□□□ -0.28
CLTC-215ENST00000621829 RIOK3O14730 519 aaKnown RBP13.3□□□□□ -0.28
CLTC-215ENST00000621829 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
CLTC-215ENST00000621829 FMNL3Q8IVF7 1028 aa13.3□□□□□ -0.28
CLTC-215ENST00000621829 HPDP32754 393 aaPredicted RBP13.29□□□□□ -0.28
CLTC-215ENST00000621829 USP48Q86UV5 1035 aa13.29□□□□□ -0.28
CLTC-215ENST00000621829 CEP85LQ5SZL2 805 aa13.29□□□□□ -0.28
CLTC-215ENST00000621829 EXOC6BQ9Y2D4 811 aa13.29□□□□□ -0.28
CLTC-215ENST00000621829 USP5P45974 858 aa13.29□□□□□ -0.28
CLTC-215ENST00000621829 LIMCH1Q9UPQ0 1083 aa13.29□□□□□ -0.28
CLTC-215ENST00000621829 SRGAP3O43295 1099 aa13.29□□□□□ -0.28
CLTC-215ENST00000621829 KCNK9Q9NPC2 374 aa13.29□□□□□ -0.28
CLTC-215ENST00000621829 SH2B1Q9NRF2 756 aaPredicted RBP13.29□□□□□ -0.28
CLTC-215ENST00000621829 PPFIBP2Q8ND30 876 aa13.29□□□□□ -0.28
CLTC-215ENST00000621829 IQCGQ9H095 443 aaKnown RBP13.29□□□□□ -0.28
CLTC-215ENST00000621829 POTEDQ86YR6 584 aa13.29□□□□□ -0.28
CLTC-215ENST00000621829 ANAPC4Q9UJX5 808 aa13.29□□□□□ -0.28
CLTC-215ENST00000621829 FHOD3Q2V2M9 1422 aa13.29□□□□□ -0.28
CLTC-215ENST00000621829 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
CLTC-215ENST00000621829 LZTFL1Q9NQ48 299 aa13.28□□□□□ -0.28
CLTC-215ENST00000621829 TTC36A6NLP5 189 aa13.28□□□□□ -0.28
CLTC-215ENST00000621829 ZNF76P36508 570 aa13.28□□□□□ -0.28
CLTC-215ENST00000621829 AOPEPQ8N6M6 819 aa13.28□□□□□ -0.28
CLTC-215ENST00000621829 TPX2Q9ULW0 747 aaKnown RBP13.28□□□□□ -0.28
CLTC-215ENST00000621829 HGSO14964 777 aaPredicted RBP13.28□□□□□ -0.28
CLTC-215ENST00000621829 TRIM21P19474 475 aaKnown RBP13.28□□□□□ -0.28
CLTC-215ENST00000621829 VIMP08670 466 aaKnown RBP13.28□□□□□ -0.28
CLTC-215ENST00000621829 MX1P20591 662 aa13.28□□□□□ -0.28
CLTC-215ENST00000621829 POLR3DP05423 398 aaPredicted RBP13.28□□□□□ -0.28
CLTC-215ENST00000621829 COMMD10Q9Y6G5 202 aa13.27□□□□□ -0.28
CLTC-215ENST00000621829 NDUFAB1O14561 156 aa13.27□□□□□ -0.28
CLTC-215ENST00000621829 GABPB1Q06547 395 aaPredicted RBP13.27□□□□□ -0.28
CLTC-215ENST00000621829 SF3A3Q12874 501 aaKnown RBP eCLIP13.27□□□□□ -0.285e-7■□□□□ 10.9
CLTC-215ENST00000621829 CACNA2D3Q8IZS8 1091 aa13.27□□□□□ -0.28
CLTC-215ENST00000621829 MICAL1Q8TDZ2 1067 aa13.27□□□□□ -0.28
CLTC-215ENST00000621829 DNAJC25Q9H1X3 360 aa13.27□□□□□ -0.28
CLTC-215ENST00000621829 PPFIA3O75145 1194 aa13.27□□□□□ -0.28
CLTC-215ENST00000621829 RAB11FIP3O75154 756 aa13.27□□□□□ -0.28
CLTC-215ENST00000621829 TACC1O75410 805 aa13.27□□□□□ -0.28
CLTC-215ENST00000621829 KRT13P13646 458 aa13.27□□□□□ -0.28
CLTC-215ENST00000621829 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.28
CLTC-215ENST00000621829 TBC1D32Q96NH3 1257 aa13.27□□□□□ -0.28
CLTC-215ENST00000621829 EID1Q9Y6B2 187 aa13.27□□□□□ -0.28
CLTC-215ENST00000621829 CCDC63Q8NA47 563 aa13.27□□□□□ -0.29
CLTC-215ENST00000621829 STMN4Q9H169 189 aaPredicted RBP13.27□□□□□ -0.29
CLTC-215ENST00000621829 CABP2Q9NPB3 220 aa13.27□□□□□ -0.29
CLTC-215ENST00000621829 CCDC50Q8IVM0 306 aa13.27□□□□□ -0.29
CLTC-215ENST00000621829 EVCP57679 992 aa13.27□□□□□ -0.29
CLTC-215ENST00000621829 ZC3H6P61129 1189 aaKnown RBP13.27□□□□□ -0.29
CLTC-215ENST00000621829 UBLCP1Q8WVY7 318 aaPredicted RBP13.27□□□□□ -0.29
CLTC-215ENST00000621829 SETDB1Q15047 1291 aa13.27□□□□□ -0.29
CLTC-215ENST00000621829 ZNF569Q5MCW4 686 aa13.27□□□□□ -0.29
CLTC-215ENST00000621829 SELENOOQ9BVL4 669 aa13.27□□□□□ -0.29
CLTC-215ENST00000621829 GRIPAP1Q4V328 841 aa13.26□□□□□ -0.29
CLTC-215ENST00000621829 TLDC2A0PJX2 215 aa13.26□□□□□ -0.29
CLTC-215ENST00000621829 N4BP3O15049 544 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms