RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 RIC3Q7Z5B4 369 aa13.44□□□□□ -0.26
CPNE3-212ENST00000621783 LINC00116Q8NCU8 138 aa13.44□□□□□ -0.26
CPNE3-212ENST00000621783 PLBD2Q8NHP8 589 aa13.44□□□□□ -0.26
CPNE3-212ENST00000621783 SRCIN1Q9C0H9 1055 aa13.44□□□□□ -0.26
CPNE3-212ENST00000621783 C1orf115Q9H7X2 142 aa13.44□□□□□ -0.26
CPNE3-212ENST00000621783 CCDC87Q9NVE4 849 aa13.44□□□□□ -0.26
CPNE3-212ENST00000621783 MYH14Q7Z406 1995 aaKnown RBP13.43□□□□□ -0.26
CPNE3-212ENST00000621783 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
CPNE3-212ENST00000621783 C4BP0C0L5 1744 aa13.43□□□□□ -0.26
CPNE3-212ENST00000621783 IL6STP40189 918 aaPredicted RBP13.43□□□□□ -0.26
CPNE3-212ENST00000621783 ANKRD13DQ6ZTN6 518 aa13.43□□□□□ -0.26
CPNE3-212ENST00000621783 METTL22Q9BUU2 404 aaPredicted RBP13.43□□□□□ -0.26
CPNE3-212ENST00000621783 CCNL1Q9UK58 526 aaPredicted RBP13.43□□□□□ -0.26
CPNE3-212ENST00000621783 ZNF330Q9Y3S2 320 aaPredicted RBP13.43□□□□□ -0.26
CPNE3-212ENST00000621783 IBTKQ9P2D0 1353 aaPredicted RBP13.43□□□□□ -0.26
CPNE3-212ENST00000621783 ANKRD36CQ5JPF3 1778 aa13.43□□□□□ -0.26
CPNE3-212ENST00000621783 BCORQ6W2J9 1755 aa13.43□□□□□ -0.26
CPNE3-212ENST00000621783 CNTNAP4Q9C0A0 1308 aa13.42□□□□□ -0.26
CPNE3-212ENST00000621783 ALDH1L1O75891 902 aa13.42□□□□□ -0.26
CPNE3-212ENST00000621783 KCNQ4P56696 695 aa13.42□□□□□ -0.26
CPNE3-212ENST00000621783 KIF6Q6ZMV9 814 aa13.42□□□□□ -0.26
CPNE3-212ENST00000621783 ILDR1Q86SU0 546 aaPredicted RBP13.42□□□□□ -0.26
CPNE3-212ENST00000621783 LINS1Q8NG48 757 aa13.42□□□□□ -0.26
CPNE3-212ENST00000621783 SCN7AQ01118 1682 aa13.41□□□□□ -0.26
CPNE3-212ENST00000621783 RGPD3A6NKT7 1758 aaPredicted RBP13.41□□□□□ -0.26
CPNE3-212ENST00000621783 RGPD4Q7Z3J3 1758 aa13.41□□□□□ -0.26
CPNE3-212ENST00000621783 NEXNQ0ZGT2 675 aa13.41□□□□□ -0.26
CPNE3-212ENST00000621783 CWF19L2Q2TBE0 894 aaKnown RBP13.41□□□□□ -0.26
CPNE3-212ENST00000621783 CENPQQ7L2Z9 268 aaPredicted RBP13.41□□□□□ -0.26
CPNE3-212ENST00000621783 MYD88Q99836 296 aa13.41□□□□□ -0.26
CPNE3-212ENST00000621783 ZBTB3Q9H5J0 574 aa13.41□□□□□ -0.26
CPNE3-212ENST00000621783 MAP3K15Q6ZN16 1313 aa13.4□□□□□ -0.26
CPNE3-212ENST00000621783 NEURL1BA8MQ27 555 aa13.4□□□□□ -0.26
CPNE3-212ENST00000621783 IGKV5-2P06315 115 aa13.4□□□□□ -0.26
CPNE3-212ENST00000621783 GNAI3P08754 354 aa13.4□□□□□ -0.26
CPNE3-212ENST00000621783 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
CPNE3-212ENST00000621783 USP44Q9H0E7 712 aa13.4□□□□□ -0.26
CPNE3-212ENST00000621783 COL15A1P39059 1388 aa13.4□□□□□ -0.26
CPNE3-212ENST00000621783 IGHDP01880 384 aa13.39□□□□□ -0.27
CPNE3-212ENST00000621783 UBTFL1P0CB47 393 aaPredicted RBP13.39□□□□□ -0.27
CPNE3-212ENST00000621783 EIF5P55010 431 aaKnown RBP13.39□□□□□ -0.27
CPNE3-212ENST00000621783 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
CPNE3-212ENST00000621783 C4AP0C0L4 1744 aa13.39□□□□□ -0.27
CPNE3-212ENST00000621783 GNAI2P04899 355 aa13.38□□□□□ -0.27
CPNE3-212ENST00000621783 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
CPNE3-212ENST00000621783 RC3H1Q5TC82 1133 aaKnown RBP13.38□□□□□ -0.27
CPNE3-212ENST00000621783 CEP85Q6P2H3 762 aa13.38□□□□□ -0.27
CPNE3-212ENST00000621783 DZIP3Q86Y13 1208 aaKnown RBP13.38□□□□□ -0.27
CPNE3-212ENST00000621783 NUP98P52948 1817 aa13.37□□□□□ -0.27
CPNE3-212ENST00000621783 ATP5J2-PTCD1G3V325 749 aa13.37□□□□□ -0.27
CPNE3-212ENST00000621783 GRM8O00222 908 aa13.37□□□□□ -0.27
CPNE3-212ENST00000621783 NBPF7P0C2Y1 421 aaPredicted RBP13.37□□□□□ -0.27
CPNE3-212ENST00000621783 SLC27A3Q5K4L6 730 aa13.37□□□□□ -0.27
CPNE3-212ENST00000621783 NPM2Q86SE8 214 aaKnown RBP13.37□□□□□ -0.27
CPNE3-212ENST00000621783 ANKRD44Q8N8A2 993 aa13.37□□□□□ -0.27
CPNE3-212ENST00000621783 RWDD1Q9H446 243 aaPredicted RBP13.37□□□□□ -0.27
CPNE3-212ENST00000621783 LRRC4BQ9NT99 713 aa13.37□□□□□ -0.27
CPNE3-212ENST00000621783 C9orf78Q9NZ63 289 aaPredicted RBP13.37□□□□□ -0.27
CPNE3-212ENST00000621783 LRRFIP2Q9Y608 721 aaKnown RBP13.37□□□□□ -0.27
CPNE3-212ENST00000621783 UTYO14607 1347 aa13.37□□□□□ -0.27
CPNE3-212ENST00000621783 ERVV-1B6SEH8 477 aa13.36□□□□□ -0.27
CPNE3-212ENST00000621783 GNPATO15228 680 aa13.36□□□□□ -0.27
CPNE3-212ENST00000621783 GCKRQ14397 625 aa13.36□□□□□ -0.27
CPNE3-212ENST00000621783 SIRT2Q8IXJ6 389 aa13.36□□□□□ -0.27
CPNE3-212ENST00000621783 ARXQ96QS3 562 aa13.36□□□□□ -0.27
CPNE3-212ENST00000621783 ISCA1Q9BUE6 129 aa13.36□□□□□ -0.27
CPNE3-212ENST00000621783 TBC1D2BQ9UPU7 963 aa13.36□□□□□ -0.27
CPNE3-212ENST00000621783 UBR3Q6ZT12 1888 aa13.36□□□□□ -0.27
CPNE3-212ENST00000621783 A0A087WZG4 1122 aa13.35□□□□□ -0.27
CPNE3-212ENST00000621783 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
CPNE3-212ENST00000621783 CAMTA2O94983 1202 aa13.35□□□□□ -0.27
CPNE3-212ENST00000621783 APBA3O96018 575 aa13.35□□□□□ -0.27
CPNE3-212ENST00000621783 TCIRG1Q13488 830 aa13.35□□□□□ -0.27
CPNE3-212ENST00000621783 HLFQ16534 295 aa13.35□□□□□ -0.27
CPNE3-212ENST00000621783 GIGYF2Q6Y7W6 1299 aaKnown RBP13.35□□□□□ -0.27
CPNE3-212ENST00000621783 RPAP2Q8IXW5 612 aaPredicted RBP13.35□□□□□ -0.27
CPNE3-212ENST00000621783 RPS6KA4O75676 772 aa13.34□□□□□ -0.27
CPNE3-212ENST00000621783 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
CPNE3-212ENST00000621783 HSP90AB3PQ58FF7 597 aa13.34□□□□□ -0.27
CPNE3-212ENST00000621783 CCDC191Q8NCU4 936 aa13.34□□□□□ -0.27
CPNE3-212ENST00000621783 AK7Q96M32 723 aa13.34□□□□□ -0.27
CPNE3-212ENST00000621783 CWC25Q9NXE8 425 aaPredicted RBP13.34□□□□□ -0.27
CPNE3-212ENST00000621783 PLSCR1O15162 318 aa13.33□□□□□ -0.28
CPNE3-212ENST00000621783 PROM2Q8N271 834 aa13.33□□□□□ -0.28
CPNE3-212ENST00000621783 SUCLG2Q96I99 432 aa13.33□□□□□ -0.28
CPNE3-212ENST00000621783 RTCBQ9Y3I0 505 aaKnown RBP13.33□□□□□ -0.28
CPNE3-212ENST00000621783 TUBGCP6Q96RT7 1819 aa13.32□□□□□ -0.28
CPNE3-212ENST00000621783 GPTP24298 496 aa13.32□□□□□ -0.28
CPNE3-212ENST00000621783 CASP7P55210 303 aa13.32□□□□□ -0.28
CPNE3-212ENST00000621783 TRIM28Q13263 835 aaKnown RBP13.32□□□□□ -0.28
CPNE3-212ENST00000621783 SMIM5Q71RC9 77 aa13.32□□□□□ -0.28
CPNE3-212ENST00000621783 UBE3BQ7Z3V4 1068 aa13.32□□□□□ -0.28
CPNE3-212ENST00000621783 AMIGO3Q86WK7 504 aa13.32□□□□□ -0.28
CPNE3-212ENST00000621783 SMC5Q8IY18 1101 aa13.32□□□□□ -0.28
CPNE3-212ENST00000621783 HDAC5Q9UQL6 1122 aa13.32□□□□□ -0.28
CPNE3-212ENST00000621783 COL24A1Q17RW2 1714 aa13.32□□□□□ -0.28
CPNE3-212ENST00000621783 PNMA6EA0A0J9YXQ4 647 aa13.31□□□□□ -0.28
CPNE3-212ENST00000621783 H7C1W4 665 aa13.31□□□□□ -0.28
CPNE3-212ENST00000621783 HMMRO75330 724 aa13.31□□□□□ -0.28
CPNE3-212ENST00000621783 ATP8B2P98198 1209 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms