RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 DDR1Q08345 913 aa18.49■□□□□ 0.55
CBWD3-217ENST00000621474 KIF13BQ9NQT8 1826 aa18.49■□□□□ 0.55
CBWD3-217ENST00000621474 POLD1P28340 1107 aa18.49■□□□□ 0.55
CBWD3-217ENST00000621474 HLFQ16534 295 aa18.49■□□□□ 0.55
CBWD3-217ENST00000621474 NFIXQ14938 502 aa18.48■□□□□ 0.55
CBWD3-217ENST00000621474 TBC1D9BQ66K14 1250 aa18.48■□□□□ 0.55
CBWD3-217ENST00000621474 ARXQ96QS3 562 aa18.48■□□□□ 0.55
CBWD3-217ENST00000621474 ZBED9Q6R2W3 1325 aa18.48■□□□□ 0.55
CBWD3-217ENST00000621474 MAP3K15Q6ZN16 1313 aa18.48■□□□□ 0.55
CBWD3-217ENST00000621474 POLRMTO00411 1230 aaKnown RBP18.47■□□□□ 0.55
CBWD3-217ENST00000621474 COPS6Q7L5N1 327 aa18.47■□□□□ 0.55
CBWD3-217ENST00000621474 NPM2Q86SE8 214 aaKnown RBP18.47■□□□□ 0.55
CBWD3-217ENST00000621474 XAGE3Q8WTP9 111 aa18.47■□□□□ 0.55
CBWD3-217ENST00000621474 PHAXQ9H814 394 aaKnown RBP18.47■□□□□ 0.55
CBWD3-217ENST00000621474 ANKRD36CQ5JPF3 1778 aa18.47■□□□□ 0.55
CBWD3-217ENST00000621474 ARFGEF2Q9Y6D5 1785 aa18.47■□□□□ 0.55
CBWD3-217ENST00000621474 TCERG1O14776 1098 aaKnown RBP18.46■□□□□ 0.55
CBWD3-217ENST00000621474 CCDC30Q5VVM6 783 aa18.46■□□□□ 0.55
CBWD3-217ENST00000621474 ERVV-1B6SEH8 477 aa18.45■□□□□ 0.54
CBWD3-217ENST00000621474 RGL2O15211 777 aa18.45■□□□□ 0.54
CBWD3-217ENST00000621474 CLEC4GQ6UXB4 293 aa18.45■□□□□ 0.54
CBWD3-217ENST00000621474 ZBTB3Q9H5J0 574 aa18.45■□□□□ 0.54
CBWD3-217ENST00000621474 HYPKQ9NX55 129 aa18.45■□□□□ 0.54
CBWD3-217ENST00000621474 KIAA1551Q9HCM1 1747 aa18.45■□□□□ 0.54
CBWD3-217ENST00000621474 AIMP1Q12904 312 aaKnown RBP18.45■□□□□ 0.54
CBWD3-217ENST00000621474 FHDC1Q9C0D6 1143 aaPredicted RBP18.44■□□□□ 0.54
CBWD3-217ENST00000621474 ATP10DQ9P241 1426 aa18.44■□□□□ 0.54
CBWD3-217ENST00000621474 GIGYF2Q6Y7W6 1299 aaKnown RBP18.43■□□□□ 0.54
CBWD3-217ENST00000621474 KIF6Q6ZMV9 814 aa18.43■□□□□ 0.54
CBWD3-217ENST00000621474 BICDL1Q6ZP65 573 aa18.43■□□□□ 0.54
CBWD3-217ENST00000621474 PPP1R1BQ9UD71 204 aaPredicted RBP18.43■□□□□ 0.54
CBWD3-217ENST00000621474 C10orf71Q711Q0 1435 aa18.42■□□□□ 0.54
CBWD3-217ENST00000621474 ANKRD31Q8N7Z5 1873 aa18.42■□□□□ 0.54
CBWD3-217ENST00000621474 G2E3Q7L622 706 aa18.41■□□□□ 0.54
CBWD3-217ENST00000621474 SYT17Q9BSW7 474 aa18.41■□□□□ 0.54
CBWD3-217ENST00000621474 CHMP4AQ9BY43 222 aa18.41■□□□□ 0.54
CBWD3-217ENST00000621474 ZNF652Q9Y2D9 606 aa18.41■□□□□ 0.54
CBWD3-217ENST00000621474 PARP3Q9Y6F1 533 aa18.41■□□□□ 0.54
CBWD3-217ENST00000621474 CARMIL3Q8ND23 1372 aa18.41■□□□□ 0.54
CBWD3-217ENST00000621474 SLC4A2P04920 1241 aa18.41■□□□□ 0.54
CBWD3-217ENST00000621474 UBN2Q6ZU65 1347 aa18.41■□□□□ 0.54
CBWD3-217ENST00000621474 STK31Q9BXU1 1019 aa18.41■□□□□ 0.54
CBWD3-217ENST00000621474 SERPINB2P05120 415 aa18.4■□□□□ 0.54
CBWD3-217ENST00000621474 ANKRD13DQ6ZTN6 518 aa18.4■□□□□ 0.54
CBWD3-217ENST00000621474 PLBD2Q8NHP8 589 aa18.4■□□□□ 0.54
CBWD3-217ENST00000621474 NIP7Q9Y221 180 aaKnown RBP eCLIP18.4■□□□□ 0.54
CBWD3-217ENST00000621474 N4BP2Q86UW6 1770 aaPredicted RBP18.4■□□□□ 0.54
CBWD3-217ENST00000621474 ZNF34Q8IZ26 560 aa18.39■□□□□ 0.53
CBWD3-217ENST00000621474 SETDB2Q96T68 719 aa18.39■□□□□ 0.53
CBWD3-217ENST00000621474 ADCY9O60503 1353 aa18.39■□□□□ 0.53
CBWD3-217ENST00000621474 NLGN2Q8NFZ4 835 aa18.38■□□□□ 0.53
CBWD3-217ENST00000621474 BRCA1P38398 1863 aaKnown RBP18.38■□□□□ 0.53
CBWD3-217ENST00000621474 FLIIQ13045 1269 aa18.38■□□□□ 0.53
CBWD3-217ENST00000621474 CD2APQ9Y5K6 639 aa18.38■□□□□ 0.53
CBWD3-217ENST00000621474 GPTP24298 496 aa18.37■□□□□ 0.53
CBWD3-217ENST00000621474 PRR5LQ6MZQ0 368 aa18.37■□□□□ 0.53
CBWD3-217ENST00000621474 TCIRG1Q13488 830 aa18.36■□□□□ 0.53
CBWD3-217ENST00000621474 KLHL34Q8N239 644 aa18.36■□□□□ 0.53
CBWD3-217ENST00000621474 SSH1Q8WYL5 1049 aa18.36■□□□□ 0.53
CBWD3-217ENST00000621474 PXDNLA1KZ92 1463 aa18.36■□□□□ 0.53
CBWD3-217ENST00000621474 COL11A2P13942 1736 aaPredicted RBP18.35■□□□□ 0.53
CBWD3-217ENST00000621474 CT47B1P0C2W7 299 aaPredicted RBP18.35■□□□□ 0.53
CBWD3-217ENST00000621474 DLEC1Q9Y238 1755 aa18.35■□□□□ 0.53
CBWD3-217ENST00000621474 TNRC6CQ9HCJ0 1690 aaKnown RBP18.35■□□□□ 0.53
CBWD3-217ENST00000621474 PI4KAP2A4QPH2 592 aa18.34■□□□□ 0.53
CBWD3-217ENST00000621474 SUSD4Q5VX71 490 aa18.34■□□□□ 0.53
CBWD3-217ENST00000621474 CCDC24Q8N4L8 307 aa18.34■□□□□ 0.53
CBWD3-217ENST00000621474 MRPL50Q8N5N7 158 aaKnown RBP18.34■□□□□ 0.53
CBWD3-217ENST00000621474 PI4KAP1Q8N8J0 262 aa18.34■□□□□ 0.53
CBWD3-217ENST00000621474 ZNF428Q96B54 188 aa18.34■□□□□ 0.53
CBWD3-217ENST00000621474 IBTKQ9P2D0 1353 aaPredicted RBP18.34■□□□□ 0.53
CBWD3-217ENST00000621474 KSR2Q6VAB6 950 aa18.34■□□□□ 0.53
CBWD3-217ENST00000621474 RIC3Q7Z5B4 369 aa18.34■□□□□ 0.53
CBWD3-217ENST00000621474 ISCA1Q9BUE6 129 aa18.34■□□□□ 0.53
CBWD3-217ENST00000621474 BCL2L13Q9BXK5 485 aa18.34■□□□□ 0.53
CBWD3-217ENST00000621474 MAP3K2Q9Y2U5 619 aa18.34■□□□□ 0.53
CBWD3-217ENST00000621474 NTSR2O95665 410 aa18.33■□□□□ 0.52
CBWD3-217ENST00000621474 ALDH1L2Q3SY69 923 aa18.33■□□□□ 0.52
CBWD3-217ENST00000621474 HSP90AB3PQ58FF7 597 aa18.33■□□□□ 0.52
CBWD3-217ENST00000621474 NLRP10Q86W26 655 aa18.33■□□□□ 0.52
CBWD3-217ENST00000621474 NBPF5PQ86XG9 351 aaPredicted RBP18.33■□□□□ 0.52
CBWD3-217ENST00000621474 CNBD1Q8NA66 436 aa18.33■□□□□ 0.52
CBWD3-217ENST00000621474 ABCC12Q96J65 1359 aa18.33■□□□□ 0.52
CBWD3-217ENST00000621474 FAM177BA6PVY3 158 aa18.32■□□□□ 0.52
CBWD3-217ENST00000621474 ATP5J2-PTCD1G3V325 749 aa18.32■□□□□ 0.52
CBWD3-217ENST00000621474 DDX58O95786 925 aaKnown RBP18.32■□□□□ 0.52
CBWD3-217ENST00000621474 METTL22Q9BUU2 404 aaPredicted RBP18.32■□□□□ 0.52
CBWD3-217ENST00000621474 RARSP54136 660 aaKnown RBP18.31■□□□□ 0.52
CBWD3-217ENST00000621474 FKBP5Q13451 457 aaPredicted RBP18.31■□□□□ 0.52
CBWD3-217ENST00000621474 PARP10Q53GL7 1025 aa18.31■□□□□ 0.52
CBWD3-217ENST00000621474 NUTM1Q86Y26 1132 aa18.31■□□□□ 0.52
CBWD3-217ENST00000621474 DDX60Q8IY21 1712 aaKnown RBP18.31■□□□□ 0.52
CBWD3-217ENST00000621474 LAMB2P55268 1798 aa18.31■□□□□ 0.52
CBWD3-217ENST00000621474 KCNA3P22001 575 aa18.31■□□□□ 0.52
CBWD3-217ENST00000621474 TRIM28Q13263 835 aaKnown RBP18.31■□□□□ 0.52
CBWD3-217ENST00000621474 TPTE2Q6XPS3 522 aa18.31■□□□□ 0.52
CBWD3-217ENST00000621474 MYD88Q99836 296 aa18.31■□□□□ 0.52
CBWD3-217ENST00000621474 F6X3S4 739 aa18.3■□□□□ 0.52
CBWD3-217ENST00000621474 IGKV5-2P06315 115 aa18.3■□□□□ 0.52
CBWD3-217ENST00000621474 TGFB2P61812 414 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms