RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 ST5P78524 1137 aa21.03■□□□□ 0.96
SNHG28-203ENST00000621242 NPM2Q86SE8 214 aaKnown RBP21.03■□□□□ 0.96
SNHG28-203ENST00000621242 MASTLQ96GX5 879 aa21.03■□□□□ 0.96
SNHG28-203ENST00000621242 PASKQ96RG2 1323 aa21.03■□□□□ 0.96
SNHG28-203ENST00000621242 GNAT3A8MTJ3 354 aa21.02■□□□□ 0.96
SNHG28-203ENST00000621242 IQCA1LA6NCM1 817 aa21.01■□□□□ 0.95
SNHG28-203ENST00000621242 SOGA3Q5TF21 947 aa21.01■□□□□ 0.95
SNHG28-203ENST00000621242 FMNL2Q96PY5 1086 aa21.01■□□□□ 0.95
SNHG28-203ENST00000621242 CC2D1BQ5T0F9 858 aaKnown RBP21■□□□□ 0.95
SNHG28-203ENST00000621242 LDHDQ86WU2 507 aa21■□□□□ 0.95
SNHG28-203ENST00000621242 TAF1DQ9H5J8 278 aaPredicted RBP21■□□□□ 0.95
SNHG28-203ENST00000621242 U2SURPO15042 1029 aaKnown RBP20.99■□□□□ 0.95
SNHG28-203ENST00000621242 DZIP3Q86Y13 1208 aaKnown RBP20.99■□□□□ 0.95
SNHG28-203ENST00000621242 GAS2L2Q8NHY3 880 aa20.99■□□□□ 0.95
SNHG28-203ENST00000621242 C7orf43Q8WVR3 580 aa20.99■□□□□ 0.95
SNHG28-203ENST00000621242 L3MBTL3Q96JM7 780 aaPredicted RBP20.99■□□□□ 0.95
SNHG28-203ENST00000621242 KCNQ3O43525 872 aa20.98■□□□□ 0.95
SNHG28-203ENST00000621242 PIP4K2AP48426 406 aaPredicted RBP20.98■□□□□ 0.95
SNHG28-203ENST00000621242 VEGFBP49765 207 aa20.98■□□□□ 0.95
SNHG28-203ENST00000621242 PRDM10Q9NQV6 1147 aa20.98■□□□□ 0.95
SNHG28-203ENST00000621242 COL3A1P02461 1466 aaPredicted RBP20.97■□□□□ 0.95
SNHG28-203ENST00000621242 PER1O15534 1290 aaPredicted RBP20.97■□□□□ 0.95
SNHG28-203ENST00000621242 ITGBL1O95965 494 aaPredicted RBP20.97■□□□□ 0.95
SNHG28-203ENST00000621242 CCDC93Q567U6 631 aa20.97■□□□□ 0.95
SNHG28-203ENST00000621242 KIF7Q2M1P5 1343 aa20.97■□□□□ 0.95
SNHG28-203ENST00000621242 TMEM88BA6NKF7 163 aa20.96■□□□□ 0.95
SNHG28-203ENST00000621242 EAPPQ56P03 285 aaPredicted RBP20.96■□□□□ 0.95
SNHG28-203ENST00000621242 NBPF5PQ86XG9 351 aaPredicted RBP20.96■□□□□ 0.95
SNHG28-203ENST00000621242 AIDAQ96BJ3 306 aa20.96■□□□□ 0.95
SNHG28-203ENST00000621242 USP16Q9Y5T5 823 aa20.96■□□□□ 0.95
SNHG28-203ENST00000621242 BTBD11A6QL63 1104 aa20.95■□□□□ 0.94
SNHG28-203ENST00000621242 CTCFP49711 727 aaPredicted RBP20.95■□□□□ 0.94
SNHG28-203ENST00000621242 ZNF277Q9NRM2 450 aaPredicted RBP20.95■□□□□ 0.94
SNHG28-203ENST00000621242 CLEC11AQ9Y240 323 aa20.95■□□□□ 0.94
SNHG28-203ENST00000621242 ZNF541Q9H0D2 1346 aa20.95■□□□□ 0.94
SNHG28-203ENST00000621242 CEMIPQ8WUJ3 1361 aa20.95■□□□□ 0.94
SNHG28-203ENST00000621242 NPR1P16066 1061 aa20.94■□□□□ 0.94
SNHG28-203ENST00000621242 FKBP4Q02790 459 aaKnown RBP eCLIP20.94■□□□□ 0.94
SNHG28-203ENST00000621242 OLFM4Q6UX06 510 aa20.94■□□□□ 0.94
SNHG28-203ENST00000621242 ADAMTSL1Q8N6G6 1762 aa20.94■□□□□ 0.94
SNHG28-203ENST00000621242 PRAMEF22A3QJZ6 481 aa20.93■□□□□ 0.94
SNHG28-203ENST00000621242 CNGB1Q14028 1251 aaPredicted RBP20.93■□□□□ 0.94
SNHG28-203ENST00000621242 CLEC4GQ6UXB4 293 aa20.93■□□□□ 0.94
SNHG28-203ENST00000621242 HACL1Q9UJ83 578 aa20.93■□□□□ 0.94
SNHG28-203ENST00000621242 CCER1Q8TC90 406 aaPredicted RBP20.92■□□□□ 0.94
SNHG28-203ENST00000621242 PHACTR3Q96KR7 559 aa20.92■□□□□ 0.94
SNHG28-203ENST00000621242 WBP1LQ9NX94 342 aa20.92■□□□□ 0.94
SNHG28-203ENST00000621242 KLRG2A4D1S0 409 aaPredicted RBP20.91■□□□□ 0.94
SNHG28-203ENST00000621242 EPHX2P34913 555 aa20.91■□□□□ 0.94
SNHG28-203ENST00000621242 LBX1P52954 281 aa20.91■□□□□ 0.94
SNHG28-203ENST00000621242 ZNF652Q9Y2D9 606 aa20.91■□□□□ 0.94
SNHG28-203ENST00000621242 RNF123Q5XPI4 1314 aa20.9■□□□□ 0.94
SNHG28-203ENST00000621242 FAM177BA6PVY3 158 aa20.9■□□□□ 0.94
SNHG28-203ENST00000621242 TPTE2Q6XPS3 522 aa20.9■□□□□ 0.94
SNHG28-203ENST00000621242 DEFB115Q30KQ5 88 aa20.89■□□□□ 0.93
SNHG28-203ENST00000621242 MAP1SQ66K74 1059 aaPredicted RBP20.89■□□□□ 0.93
SNHG28-203ENST00000621242 RTKN2Q8IZC4 609 aa20.89■□□□□ 0.93
SNHG28-203ENST00000621242 CNTROBQ8N137 903 aa20.89■□□□□ 0.93
SNHG28-203ENST00000621242 NIP7Q9Y221 180 aaKnown RBP eCLIP20.89■□□□□ 0.93
SNHG28-203ENST00000621242 FZD9O00144 591 aa20.88■□□□□ 0.93
SNHG28-203ENST00000621242 PRKAR2BP31323 418 aa20.88■□□□□ 0.93
SNHG28-203ENST00000621242 IARSP41252 1262 aaKnown RBP20.88■□□□□ 0.93
SNHG28-203ENST00000621242 PNMA8AQ86V59 439 aaPredicted RBP20.88■□□□□ 0.93
SNHG28-203ENST00000621242 SYNE4Q8N205 404 aa20.88■□□□□ 0.93
SNHG28-203ENST00000621242 RASSF10A6NK89 507 aa20.87■□□□□ 0.93
SNHG28-203ENST00000621242 SNRPA1P09661 255 aaKnown RBP20.87■□□□□ 0.93
SNHG28-203ENST00000621242 NBPF26B4DH59 902 aa20.86■□□□□ 0.93
SNHG28-203ENST00000621242 ALDH1B1P30837 517 aa20.86■□□□□ 0.93
SNHG28-203ENST00000621242 NBPF10Q6P3W6 841 aaKnown RBP20.86■□□□□ 0.93
SNHG28-203ENST00000621242 NBPF15Q8N660 670 aa20.86■□□□□ 0.93
SNHG28-203ENST00000621242 HSPA8P11142 646 aaKnown RBP20.85■□□□□ 0.93
SNHG28-203ENST00000621242 GPC2Q8N158 579 aa20.85■□□□□ 0.93
SNHG28-203ENST00000621242 RSPH6AQ9H0K4 717 aa20.85■□□□□ 0.93
SNHG28-203ENST00000621242 WDR33Q9C0J8 1336 aaKnown RBP20.84■□□□□ 0.93
SNHG28-203ENST00000621242 HLFQ16534 295 aa20.84■□□□□ 0.93
SNHG28-203ENST00000621242 MCM10Q7L590 875 aa20.84■□□□□ 0.93
SNHG28-203ENST00000621242 ABT1Q9ULW3 272 aaKnown RBP20.84■□□□□ 0.93
SNHG28-203ENST00000621242 NPC1L1Q9UHC9 1359 aa20.84■□□□□ 0.93
SNHG28-203ENST00000621242 NUP98P52948 1817 aa20.83■□□□□ 0.93
SNHG28-203ENST00000621242 RGL2O15211 777 aa20.83■□□□□ 0.93
SNHG28-203ENST00000621242 GTF2E1P29083 439 aaPredicted RBP20.83■□□□□ 0.93
SNHG28-203ENST00000621242 LTBP1Q14766 1721 aa20.82■□□□□ 0.92
SNHG28-203ENST00000621242 SNED1Q8TER0 1413 aa20.82■□□□□ 0.92
SNHG28-203ENST00000621242 MAP2K1Q02750 393 aaPredicted RBP20.82■□□□□ 0.92
SNHG28-203ENST00000621242 JDP2Q8WYK2 163 aa20.82■□□□□ 0.92
SNHG28-203ENST00000621242 RTF1Q92541 710 aaKnown RBP20.82■□□□□ 0.92
SNHG28-203ENST00000621242 ABHD8Q96I13 439 aa20.82■□□□□ 0.92
SNHG28-203ENST00000621242 PSMD1Q99460 953 aa20.82■□□□□ 0.92
SNHG28-203ENST00000621242 GJA3Q9Y6H8 435 aa20.82■□□□□ 0.92
SNHG28-203ENST00000621242 COL4A5P29400 1685 aa20.81■□□□□ 0.92
SNHG28-203ENST00000621242 DDX21Q9NR30 783 aaKnown RBP eCLIP20.81■□□□□ 0.92
SNHG28-203ENST00000621242 TRPM7Q96QT4 1865 aa20.81■□□□□ 0.92
SNHG28-203ENST00000621242 DCTN1Q14203 1278 aa20.8■□□□□ 0.92
SNHG28-203ENST00000621242 EIF6P56537 245 aaKnown RBP20.79■□□□□ 0.92
SNHG28-203ENST00000621242 FMR1Q06787 632 aaKnown RBP eCLIP20.79■□□□□ 0.92
SNHG28-203ENST00000621242 NUTM1Q86Y26 1132 aa20.79■□□□□ 0.92
SNHG28-203ENST00000621242 LAMB4A4D0S4 1761 aa20.79■□□□□ 0.92
SNHG28-203ENST00000621242 ABCC12Q96J65 1359 aa20.78■□□□□ 0.92
SNHG28-203ENST00000621242 LMOD1P29536 600 aaPredicted RBP20.78■□□□□ 0.92
SNHG28-203ENST00000621242 CRY2Q49AN0 593 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms