RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ZNF428Q96B54 188 aa17.49■□□□□ 0.39
NEK3-210ENST00000620675 NARFQ9UHQ1 456 aa17.49■□□□□ 0.39
NEK3-210ENST00000620675 ANKRD36CQ5JPF3 1778 aa17.48■□□□□ 0.39
NEK3-210ENST00000620675 ZBTB7AO95365 584 aa17.48■□□□□ 0.39
NEK3-210ENST00000620675 CT47B1P0C2W7 299 aaPredicted RBP17.48■□□□□ 0.39
NEK3-210ENST00000620675 GYS1P13807 737 aa17.48■□□□□ 0.39
NEK3-210ENST00000620675 FLIIQ13045 1269 aa17.48■□□□□ 0.39
NEK3-210ENST00000620675 FKBP8Q14318 412 aa17.48■□□□□ 0.39
NEK3-210ENST00000620675 ADCY9O60503 1353 aa17.47■□□□□ 0.39
NEK3-210ENST00000620675 ALDH1L2Q3SY69 923 aa17.47■□□□□ 0.39
NEK3-210ENST00000620675 TNNQ9UQP3 1299 aa17.47■□□□□ 0.39
NEK3-210ENST00000620675 MAP3K15Q6ZN16 1313 aa17.47■□□□□ 0.39
NEK3-210ENST00000620675 HMGB2P26583 209 aaKnown RBP17.46■□□□□ 0.39
NEK3-210ENST00000620675 FLAD1Q8NFF5 587 aa17.46■□□□□ 0.39
NEK3-210ENST00000620675 AFDNP55196 1824 aaKnown RBP17.46■□□□□ 0.39
NEK3-210ENST00000620675 F6X3S4 739 aa17.46■□□□□ 0.39
NEK3-210ENST00000620675 ZPR1O75312 459 aa17.46■□□□□ 0.39
NEK3-210ENST00000620675 NPM2Q86SE8 214 aaKnown RBP17.46■□□□□ 0.39
NEK3-210ENST00000620675 COL24A1Q17RW2 1714 aa17.45■□□□□ 0.38
NEK3-210ENST00000620675 A0A087WZG4 1122 aa17.45■□□□□ 0.38
NEK3-210ENST00000620675 PI4KAP2A4QPH2 592 aa17.45■□□□□ 0.38
NEK3-210ENST00000620675 PI4KAP1Q8N8J0 262 aa17.45■□□□□ 0.38
NEK3-210ENST00000620675 RCAN3Q9UKA8 241 aa17.45■□□□□ 0.38
NEK3-210ENST00000620675 NOB1Q9ULX3 412 aaKnown RBP17.45■□□□□ 0.38
NEK3-210ENST00000620675 ATF5Q9Y2D1 282 aaPredicted RBP17.45■□□□□ 0.38
NEK3-210ENST00000620675 FKBP5Q13451 457 aaPredicted RBP17.44■□□□□ 0.38
NEK3-210ENST00000620675 KIF6Q6ZMV9 814 aa17.44■□□□□ 0.38
NEK3-210ENST00000620675 ANKRD13DQ6ZTN6 518 aa17.44■□□□□ 0.38
NEK3-210ENST00000620675 TBC1D9BQ66K14 1250 aa17.44■□□□□ 0.38
NEK3-210ENST00000620675 BICDL1Q6ZP65 573 aa17.44■□□□□ 0.38
NEK3-210ENST00000620675 CHMP4AQ9BY43 222 aa17.43■□□□□ 0.38
NEK3-210ENST00000620675 MAP3K2Q9Y2U5 619 aa17.43■□□□□ 0.38
NEK3-210ENST00000620675 GPTP24298 496 aa17.43■□□□□ 0.38
NEK3-210ENST00000620675 PLBD2Q8NHP8 589 aa17.43■□□□□ 0.38
NEK3-210ENST00000620675 GIGYF2Q6Y7W6 1299 aaKnown RBP17.42■□□□□ 0.38
NEK3-210ENST00000620675 RIC3Q7Z5B4 369 aa17.42■□□□□ 0.38
NEK3-210ENST00000620675 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
NEK3-210ENST00000620675 ERVV-1B6SEH8 477 aa17.41■□□□□ 0.38
NEK3-210ENST00000620675 PLIN1O60240 522 aa17.41■□□□□ 0.38
NEK3-210ENST00000620675 NFIXQ14938 502 aa17.41■□□□□ 0.38
NEK3-210ENST00000620675 KSR2Q6VAB6 950 aa17.41■□□□□ 0.38
NEK3-210ENST00000620675 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
NEK3-210ENST00000620675 BRPF1P55201 1214 aaPredicted RBP17.41■□□□□ 0.38
NEK3-210ENST00000620675 DDR1Q08345 913 aa17.41■□□□□ 0.38
NEK3-210ENST00000620675 UBN2Q6ZU65 1347 aa17.41■□□□□ 0.38
NEK3-210ENST00000620675 MYD88Q99836 296 aa17.4■□□□□ 0.38
NEK3-210ENST00000620675 UTRNP46939 3433 aa17.39■□□□□ 0.37
NEK3-210ENST00000620675 FAM177BA6PVY3 158 aa17.39■□□□□ 0.37
NEK3-210ENST00000620675 MMP10P09238 476 aa17.39■□□□□ 0.37
NEK3-210ENST00000620675 TM4SF1P30408 202 aa17.39■□□□□ 0.37
NEK3-210ENST00000620675 SLC16A10Q8TF71 515 aa17.39■□□□□ 0.37
NEK3-210ENST00000620675 MTFR1LQ9H019 292 aa17.39■□□□□ 0.37
NEK3-210ENST00000620675 NIP7Q9Y221 180 aaKnown RBP eCLIP17.39■□□□□ 0.37
NEK3-210ENST00000620675 N4BP2Q86UW6 1770 aaPredicted RBP17.39■□□□□ 0.37
NEK3-210ENST00000620675 IGKV5-2P06315 115 aa17.38■□□□□ 0.37
NEK3-210ENST00000620675 TRIM27P14373 513 aa17.38■□□□□ 0.37
NEK3-210ENST00000620675 PTGER2P43116 358 aa17.38■□□□□ 0.37
NEK3-210ENST00000620675 CWF19L2Q2TBE0 894 aaKnown RBP17.38■□□□□ 0.37
NEK3-210ENST00000620675 CLEC4GQ6UXB4 293 aa17.38■□□□□ 0.37
NEK3-210ENST00000620675 ZNF34Q8IZ26 560 aa17.38■□□□□ 0.37
NEK3-210ENST00000620675 DNAAF4Q8WXU2 420 aa17.38■□□□□ 0.37
NEK3-210ENST00000620675 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
NEK3-210ENST00000620675 SGIP1Q9BQI5 828 aa17.38■□□□□ 0.37
NEK3-210ENST00000620675 METTL22Q9BUU2 404 aaPredicted RBP17.38■□□□□ 0.37
NEK3-210ENST00000620675 DDX58O95786 925 aaKnown RBP17.38■□□□□ 0.37
NEK3-210ENST00000620675 TCIRG1Q13488 830 aa17.38■□□□□ 0.37
NEK3-210ENST00000620675 NLGN1Q8N2Q7 840 aa17.38■□□□□ 0.37
NEK3-210ENST00000620675 CCDC24Q8N4L8 307 aa17.38■□□□□ 0.37
NEK3-210ENST00000620675 ATP10DQ9P241 1426 aa17.37■□□□□ 0.37
NEK3-210ENST00000620675 PTPRCP08575 1304 aa17.37■□□□□ 0.37
NEK3-210ENST00000620675 SLC4A10Q6U841 1118 aa17.37■□□□□ 0.37
NEK3-210ENST00000620675 NRXN2Q9P2S2 1712 aa17.37■□□□□ 0.37
NEK3-210ENST00000620675 KIF16BQ96L93 1317 aa17.37■□□□□ 0.37
NEK3-210ENST00000620675 POLRMTO00411 1230 aaKnown RBP17.36■□□□□ 0.37
NEK3-210ENST00000620675 RLBP1P12271 317 aa17.36■□□□□ 0.37
NEK3-210ENST00000620675 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
NEK3-210ENST00000620675 JARID2Q92833 1246 aaPredicted RBP17.36■□□□□ 0.37
NEK3-210ENST00000620675 ISCA1Q9BUE6 129 aa17.36■□□□□ 0.37
NEK3-210ENST00000620675 ZNF652Q9Y2D9 606 aa17.36■□□□□ 0.37
NEK3-210ENST00000620675 ANKRD31Q8N7Z5 1873 aa17.36■□□□□ 0.37
NEK3-210ENST00000620675 SUSD4Q5VX71 490 aa17.35■□□□□ 0.37
NEK3-210ENST00000620675 ATF7IPQ6VMQ6 1270 aa17.35■□□□□ 0.37
NEK3-210ENST00000620675 NLRP10Q86W26 655 aa17.35■□□□□ 0.37
NEK3-210ENST00000620675 BEND3Q5T5X7 828 aa17.35■□□□□ 0.37
NEK3-210ENST00000620675 C20orf194Q5TEA3 1177 aa17.35■□□□□ 0.37
NEK3-210ENST00000620675 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
NEK3-210ENST00000620675 RTL5Q5HYW3 569 aaPredicted RBP17.34■□□□□ 0.37
NEK3-210ENST00000620675 ZKSCAN2Q63HK3 967 aa17.34■□□□□ 0.37
NEK3-210ENST00000620675 NUTM1Q86Y26 1132 aa17.34■□□□□ 0.37
NEK3-210ENST00000620675 CARMIL3Q8ND23 1372 aa17.34■□□□□ 0.37
NEK3-210ENST00000620675 NEURL1BA8MQ27 555 aa17.33■□□□□ 0.37
NEK3-210ENST00000620675 SERPINB2P05120 415 aa17.33■□□□□ 0.36
NEK3-210ENST00000620675 PANK1Q8TE04 598 aa17.33■□□□□ 0.36
NEK3-210ENST00000620675 ARHGAP45Q92619 1136 aa17.33■□□□□ 0.36
NEK3-210ENST00000620675 DDX60Q8IY21 1712 aaKnown RBP17.33■□□□□ 0.36
NEK3-210ENST00000620675 TNRC6CQ9HCJ0 1690 aaKnown RBP17.32■□□□□ 0.36
NEK3-210ENST00000620675 ABCC4O15439 1325 aa17.32■□□□□ 0.36
NEK3-210ENST00000620675 LAMB2P55268 1798 aa17.32■□□□□ 0.36
NEK3-210ENST00000620675 RGL2O15211 777 aa17.32■□□□□ 0.36
NEK3-210ENST00000620675 API5Q9BZZ5 524 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms