RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 BTBD11A6QL63 1104 aa29.36■■■□□ 2.29
SRRT-218ENST00000620394 CNBD1Q8NA66 436 aa29.36■■■□□ 2.29
SRRT-218ENST00000620394 SOGA3Q5TF21 947 aa29.35■■■□□ 2.29
SRRT-218ENST00000620394 CREBZFQ9NS37 354 aa29.35■■■□□ 2.29
SRRT-218ENST00000620394 ZNF219Q9P2Y4 722 aaPredicted RBP29.35■■■□□ 2.29
SRRT-218ENST00000620394 TBC1D2BQ9UPU7 963 aa29.35■■■□□ 2.29
SRRT-218ENST00000620394 SCN4AP35499 1836 aa29.34■■■□□ 2.29
SRRT-218ENST00000620394 KCNQ3O43525 872 aa29.34■■■□□ 2.29
SRRT-218ENST00000620394 HTATSF1O43719 755 aaKnown RBP29.34■■■□□ 2.29
SRRT-218ENST00000620394 CHADLQ6NUI6 762 aa29.34■■■□□ 2.29
SRRT-218ENST00000620394 NPM2Q86SE8 214 aaKnown RBP29.34■■■□□ 2.29
SRRT-218ENST00000620394 CNKSR1Q969H4 720 aa29.34■■■□□ 2.29
SRRT-218ENST00000620394 NPHP1O15259 732 aa29.33■■■□□ 2.29
SRRT-218ENST00000620394 ST5P78524 1137 aa29.33■■■□□ 2.29
SRRT-218ENST00000620394 STYK1Q6J9G0 422 aa29.33■■■□□ 2.29
SRRT-218ENST00000620394 RTF1Q92541 710 aaKnown RBP29.33■■■□□ 2.29
SRRT-218ENST00000620394 SETDB2Q96T68 719 aa29.33■■■□□ 2.29
SRRT-218ENST00000620394 LAMB4A4D0S4 1761 aa29.33■■■□□ 2.29
SRRT-218ENST00000620394 KDM3BQ7LBC6 1761 aa29.32■■■□□ 2.28
SRRT-218ENST00000620394 MCM10Q7L590 875 aa29.32■■■□□ 2.28
SRRT-218ENST00000620394 CCDC24Q8N4L8 307 aa29.32■■■□□ 2.28
SRRT-218ENST00000620394 PRPF40BQ6NWY9 871 aaKnown RBP29.31■■■□□ 2.28
SRRT-218ENST00000620394 CAMTA2O94983 1202 aa29.3■■■□□ 2.28
SRRT-218ENST00000620394 SRGNP10124 158 aa29.29■■■□□ 2.28
SRRT-218ENST00000620394 IQCA1LA6NCM1 817 aa29.28■■■□□ 2.28
SRRT-218ENST00000620394 MASTLQ96GX5 879 aa29.28■■■□□ 2.28
SRRT-218ENST00000620394 DDNO94850 711 aaPredicted RBP29.27■■■□□ 2.28
SRRT-218ENST00000620394 DCTN1Q14203 1278 aa29.27■■■□□ 2.28
SRRT-218ENST00000620394 PLEKHF1Q96S99 279 aa29.27■■■□□ 2.28
SRRT-218ENST00000620394 MKRN1Q9UHC7 482 aaKnown RBP29.27■■■□□ 2.28
SRRT-218ENST00000620394 A1BGP04217 495 aa29.26■■■□□ 2.27
SRRT-218ENST00000620394 POTEIP0CG38 1075 aa29.25■■■□□ 2.27
SRRT-218ENST00000620394 POTEJP0CG39 1038 aa29.25■■■□□ 2.27
SRRT-218ENST00000620394 DZIP3Q86Y13 1208 aaKnown RBP29.25■■■□□ 2.27
SRRT-218ENST00000620394 CNTNAP1P78357 1384 aa29.25■■■□□ 2.27
SRRT-218ENST00000620394 SNRPA1P09661 255 aaKnown RBP29.24■■■□□ 2.27
SRRT-218ENST00000620394 L3MBTL3Q96JM7 780 aaPredicted RBP29.24■■■□□ 2.27
SRRT-218ENST00000620394 USP16Q9Y5T5 823 aa29.24■■■□□ 2.27
SRRT-218ENST00000620394 LDHDQ86WU2 507 aa29.23■■■□□ 2.27
SRRT-218ENST00000620394 PASKQ96RG2 1323 aa29.22■■■□□ 2.27
SRRT-218ENST00000620394 PRAMEF22A3QJZ6 481 aa29.22■■■□□ 2.27
SRRT-218ENST00000620394 CCDC93Q567U6 631 aa29.22■■■□□ 2.27
SRRT-218ENST00000620394 ADAMTSL1Q8N6G6 1762 aa29.21■■■□□ 2.27
SRRT-218ENST00000620394 NEFMP07197 916 aa29.21■■■□□ 2.27
SRRT-218ENST00000620394 TAF7Q15545 349 aaPredicted RBP29.21■■■□□ 2.27
SRRT-218ENST00000620394 CLEC4GQ6UXB4 293 aa29.21■■■□□ 2.27
SRRT-218ENST00000620394 NBPF5PQ86XG9 351 aaPredicted RBP29.21■■■□□ 2.27
SRRT-218ENST00000620394 ZNF652Q9Y2D9 606 aa29.21■■■□□ 2.27
SRRT-218ENST00000620394 RALBP1Q15311 655 aa29.2■■■□□ 2.26
SRRT-218ENST00000620394 NFE2L2Q16236 605 aa29.19■■■□□ 2.26
SRRT-218ENST00000620394 TAF1DQ9H5J8 278 aaPredicted RBP29.19■■■□□ 2.26
SRRT-218ENST00000620394 NPR1P16066 1061 aa29.18■■■□□ 2.26
SRRT-218ENST00000620394 RGL2O15211 777 aa29.17■■■□□ 2.26
SRRT-218ENST00000620394 C7orf43Q8WVR3 580 aa29.17■■■□□ 2.26
SRRT-218ENST00000620394 FKBP4Q02790 459 aaKnown RBP eCLIP29.16■■■□□ 2.26
SRRT-218ENST00000620394 PNNQ9H307 717 aaKnown RBP29.16■■■□□ 2.26
SRRT-218ENST00000620394 PIP4K2AP48426 406 aaPredicted RBP29.15■■■□□ 2.26
SRRT-218ENST00000620394 PNISRQ8TF01 805 aaKnown RBP29.15■■■□□ 2.26
SRRT-218ENST00000620394 KLRG2A4D1S0 409 aaPredicted RBP29.14■■■□□ 2.26
SRRT-218ENST00000620394 NBPF26B4DH59 902 aa29.14■■■□□ 2.26
SRRT-218ENST00000620394 FOXN1O15353 648 aa29.14■■■□□ 2.26
SRRT-218ENST00000620394 NBPF10Q6P3W6 841 aaKnown RBP29.14■■■□□ 2.26
SRRT-218ENST00000620394 NBPF15Q8N660 670 aa29.14■■■□□ 2.26
SRRT-218ENST00000620394 PRDM10Q9NQV6 1147 aa29.14■■■□□ 2.26
SRRT-218ENST00000620394 ZNF541Q9H0D2 1346 aa29.14■■■□□ 2.25
SRRT-218ENST00000620394 MAPK8IP3Q9UPT6 1336 aa29.14■■■□□ 2.25
SRRT-218ENST00000620394 TMEM88BA6NKF7 163 aa29.13■■■□□ 2.25
SRRT-218ENST00000620394 AIDAQ96BJ3 306 aa29.13■■■□□ 2.25
SRRT-218ENST00000620394 HACL1Q9UJ83 578 aa29.13■■■□□ 2.25
SRRT-218ENST00000620394 MIS18AQ9NYP9 233 aa29.12■■■□□ 2.25
SRRT-218ENST00000620394 EAPPQ56P03 285 aaPredicted RBP29.11■■■□□ 2.25
SRRT-218ENST00000620394 TPTE2Q6XPS3 522 aa29.11■■■□□ 2.25
SRRT-218ENST00000620394 RTKN2Q8IZC4 609 aa29.11■■■□□ 2.25
SRRT-218ENST00000620394 ZNF277Q9NRM2 450 aaPredicted RBP29.11■■■□□ 2.25
SRRT-218ENST00000620394 ITGBL1O95965 494 aaPredicted RBP29.1■■■□□ 2.25
SRRT-218ENST00000620394 NIP7Q9Y221 180 aaKnown RBP eCLIP29.1■■■□□ 2.25
SRRT-218ENST00000620394 CTCFP49711 727 aaPredicted RBP29.09■■■□□ 2.25
SRRT-218ENST00000620394 THUMPD2Q9BTF0 503 aaKnown RBP29.09■■■□□ 2.25
SRRT-218ENST00000620394 MYBBP1AQ9BQG0 1328 aaKnown RBP29.09■■■□□ 2.25
SRRT-218ENST00000620394 EPHX2P34913 555 aa29.08■■■□□ 2.25
SRRT-218ENST00000620394 VEGFBP49765 207 aa29.08■■■□□ 2.25
SRRT-218ENST00000620394 EIF4A1P60842 406 aaKnown RBP29.08■■■□□ 2.25
SRRT-218ENST00000620394 DDX10Q13206 875 aaKnown RBP29.08■■■□□ 2.25
SRRT-218ENST00000620394 PNMA8AQ86V59 439 aaPredicted RBP29.08■■■□□ 2.25
SRRT-218ENST00000620394 NUP98P52948 1817 aa29.06■■■□□ 2.24
SRRT-218ENST00000620394 RNF123Q5XPI4 1314 aa29.06■■■□□ 2.24
SRRT-218ENST00000620394 ALDH1B1P30837 517 aa29.06■■■□□ 2.24
SRRT-218ENST00000620394 IARSP41252 1262 aaKnown RBP29.06■■■□□ 2.24
SRRT-218ENST00000620394 SNED1Q8TER0 1413 aa29.05■■■□□ 2.24
SRRT-218ENST00000620394 CLEC11AQ9Y240 323 aa29.05■■■□□ 2.24
SRRT-218ENST00000620394 FZD9O00144 591 aa29.04■■■□□ 2.24
SRRT-218ENST00000620394 OLFM4Q6UX06 510 aa29.04■■■□□ 2.24
SRRT-218ENST00000620394 THSD7BQ9C0I4 1608 aa29.04■■■□□ 2.24
SRRT-218ENST00000620394 RASSF10A6NK89 507 aa29.03■■■□□ 2.24
SRRT-218ENST00000620394 GPC2Q8N158 579 aa29.03■■■□□ 2.24
SRRT-218ENST00000620394 PSMD1Q99460 953 aa29.02■■■□□ 2.24
SRRT-218ENST00000620394 WBP1LQ9NX94 342 aa29.02■■■□□ 2.24
SRRT-218ENST00000620394 FAM177BA6PVY3 158 aa29■■■□□ 2.23
SRRT-218ENST00000620394 GTF2E1P29083 439 aaPredicted RBP29■■■□□ 2.23
SRRT-218ENST00000620394 CNTROBQ8N137 903 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms