RNA–Protein interactions for RNA: ENST00000620040.4

DMD-230, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-230ENST00000620040 UBE4AQ14139 1066 aa4.84□□□□□ -1.64
DMD-230ENST00000620040 CTAGE6Q86UF2 777 aa4.84□□□□□ -1.64
DMD-230ENST00000620040 CTAGE4Q8IX94 777 aa4.84□□□□□ -1.64
DMD-230ENST00000620040 SPATS2LQ9NUQ6 558 aaKnown RBP4.84□□□□□ -1.64
DMD-230ENST00000620040 RAI14Q9P0K7 980 aa4.84□□□□□ -1.64
DMD-230ENST00000620040 SAMD15Q9P1V8 674 aa4.84□□□□□ -1.64
DMD-230ENST00000620040 REREQ9P2R6 1566 aa4.84□□□□□ -1.64
DMD-230ENST00000620040 CCDC174Q6PII3 467 aa4.84□□□□□ -1.64
DMD-230ENST00000620040 HDXQ7Z353 690 aa4.84□□□□□ -1.64
DMD-230ENST00000620040 ZNF853P0CG23 659 aa4.84□□□□□ -1.64
DMD-230ENST00000620040 HLTFQ14527 1009 aaKnown RBP eCLIP4.84□□□□□ -1.64
DMD-230ENST00000620040 CCDC30Q5VVM6 783 aa4.84□□□□□ -1.64
DMD-230ENST00000620040 CCDC129Q6ZRS4 1044 aa4.84□□□□□ -1.64
DMD-230ENST00000620040 ST20-MTHFSA0A0A6YYL1 179 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 FOSBP53539 338 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 TEFQ10587 303 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 VPS37DQ86XT2 251 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 TTC5Q8N0Z6 440 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 KRI1Q8N9T8 703 aaKnown RBP4.83□□□□□ -1.64
DMD-230ENST00000620040 CNKSR2Q8WXI2 1034 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 ZMAT2Q96NC0 199 aaKnown RBP4.83□□□□□ -1.64
DMD-230ENST00000620040 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.83□□□□□ -1.64
DMD-230ENST00000620040 RIPK4P57078 832 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 COG3Q96JB2 828 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 FAM135AQ9P2D6 1515 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 SOX12O15370 315 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 CSB-PGBD3P0DP91 1061 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 UBE2HP62256 183 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 MAP3K9P80192 1104 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 CTAGE1Q96RT6 745 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 NUP88Q99567 741 aaPredicted RBP4.83□□□□□ -1.64
DMD-230ENST00000620040 TRIM7Q9C029 511 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 FAM114A2Q9NRY5 505 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 BUB1BO60566 1050 aaPredicted RBP4.83□□□□□ -1.64
DMD-230ENST00000620040 CCDC12Q8WUD4 166 aaPredicted RBP4.83□□□□□ -1.64
DMD-230ENST00000620040 CTAGE9A4FU28 777 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 PDRG1Q9NUG6 133 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 PRPHP41219 470 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 C8orf34Q49A92 452 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 CHD1LQ86WJ1 897 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 TSG101Q99816 390 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 BICRAQ9NZM4 1560 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 ZWINTO95229 277 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 CEP128Q6ZU80 1094 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 MYRIPQ8NFW9 859 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 IGF1RP08069 1367 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 CASQ2O14958 399 aaPredicted RBP4.83□□□□□ -1.64
DMD-230ENST00000620040 USP25Q9UHP3 1055 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 MAP4K4O95819 1239 aaPredicted RBP4.83□□□□□ -1.64
DMD-230ENST00000620040 HOXA7P31268 230 aaPredicted RBP4.83□□□□□ -1.64
DMD-230ENST00000620040 ANAPC15P60006 121 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 PHLDB2Q86SQ0 1253 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 STMN2Q93045 179 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 TBC1D2Q9BYX2 928 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 MYH6P13533 1939 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 PPFIA3O75145 1194 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 BLOC1S2Q6QNY1 142 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 IKBKGQ9Y6K9 419 aa4.83□□□□□ -1.64
DMD-230ENST00000620040 CCT4P50991 539 aaKnown RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 KRBA2Q6ZNG9 492 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 TNPO1Q92973 898 aaKnown RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 PPP1R9BQ96SB3 815 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 JADE2Q9NQC1 790 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 KANK3Q6NY19 840 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 EPRSP07814 1512 aaKnown RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 ALDH3A1P30838 453 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 TSNARE1Q96NA8 513 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 CCDC77Q9BR77 488 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 MYH9P35579 1960 aaKnown RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 CEBPZQ03701 1054 aaKnown RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 SAFB2Q14151 953 aaKnown RBP eCLIP4.82□□□□□ -1.64
DMD-230ENST00000620040 KIAA1107Q9UPP5 1409 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 ATP5DP30049 168 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 INPP5BP32019 993 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 PANK2Q9BZ23 570 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 CTNNA3Q9UI47 895 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 GNAI2P04899 355 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 SLC8A1P32418 973 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 ZSCAN25Q6NSZ9 544 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 SNX21Q969T3 373 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 CWC25Q9NXE8 425 aaPredicted RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 VPS18Q9P253 973 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.82□□□□□ -1.64
DMD-230ENST00000620040 UGGT2Q9NYU1 1516 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 GTF2E1P29083 439 aaPredicted RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 MVPQ14764 893 aaKnown RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 WASHC4Q2M389 1173 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 CCDC40Q4G0X9 1142 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 EFCAB2Q5VUJ9 269 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 CACNA2D4Q7Z3S7 1137 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 CROCCP2Q86T23 111 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 SETD1BQ9UPS6 1966 aaKnown RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 PARD3Q8TEW0 1356 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 LARP1Q6PKG0 1096 aaKnown RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 RPAINQ86UA6 219 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 IQCGQ9H095 443 aaKnown RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 SOS1Q07889 1333 aaPredicted RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 KDM2BQ8NHM5 1336 aa4.82□□□□□ -1.64
DMD-230ENST00000620040 ARID4AP29374 1257 aaPredicted RBP4.82□□□□□ -1.64
DMD-230ENST00000620040 ZSCAN23Q3MJ62 389 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms