RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 PA2G4Q9UQ80 394 aaKnown RBP24.82■■□□□ 1.56
MMP28-207ENST00000619655 PLCH1Q4KWH8 1693 aa24.82■■□□□ 1.56
MMP28-207ENST00000619655 EXOC5O00471 708 aa24.81■■□□□ 1.56
MMP28-207ENST00000619655 SYTL4Q96C24 671 aaPredicted RBP24.81■■□□□ 1.56
MMP28-207ENST00000619655 KAZALD1Q96I82 304 aa24.81■■□□□ 1.56
MMP28-207ENST00000619655 DISP2A7MBM2 1401 aa24.81■■□□□ 1.56
MMP28-207ENST00000619655 ARFGEF2Q9Y6D5 1785 aa24.81■■□□□ 1.56
MMP28-207ENST00000619655 MTX1Q13505 466 aa24.81■■□□□ 1.56
MMP28-207ENST00000619655 KIF1BPQ96EK5 621 aa24.81■■□□□ 1.56
MMP28-207ENST00000619655 ZNF330Q9Y3S2 320 aaPredicted RBP24.81■■□□□ 1.56
MMP28-207ENST00000619655 RBM25P49756 843 aaKnown RBP24.8■■□□□ 1.56
MMP28-207ENST00000619655 CASC1Q6TDU7 716 aa24.8■■□□□ 1.56
MMP28-207ENST00000619655 TBC1D2Q9BYX2 928 aa24.8■■□□□ 1.56
MMP28-207ENST00000619655 UTYO14607 1347 aa24.8■■□□□ 1.56
MMP28-207ENST00000619655 AFDNP55196 1824 aaKnown RBP24.8■■□□□ 1.56
MMP28-207ENST00000619655 TTLL7Q6ZT98 887 aa24.8■■□□□ 1.56
MMP28-207ENST00000619655 TNS2Q63HR2 1409 aa24.79■■□□□ 1.56
MMP28-207ENST00000619655 PLBD2Q8NHP8 589 aa24.79■■□□□ 1.56
MMP28-207ENST00000619655 RBM42Q9BTD8 480 aaKnown RBP24.79■■□□□ 1.56
MMP28-207ENST00000619655 TRIM6-TRIM34B2RNG4 842 aa24.79■■□□□ 1.56
MMP28-207ENST00000619655 HSP90AB4PQ58FF6 505 aa24.78■■□□□ 1.56
MMP28-207ENST00000619655 RILPL2Q969X0 211 aa24.78■■□□□ 1.56
MMP28-207ENST00000619655 ERBB4Q15303 1308 aa24.78■■□□□ 1.56
MMP28-207ENST00000619655 ITGB4P16144 1822 aa24.77■■□□□ 1.56
MMP28-207ENST00000619655 A0A0G2JS52 829 aa24.77■■□□□ 1.56
MMP28-207ENST00000619655 ZBTB3Q9H5J0 574 aa24.77■■□□□ 1.56
MMP28-207ENST00000619655 CCDC9Q9Y3X0 531 aaKnown RBP24.77■■□□□ 1.56
MMP28-207ENST00000619655 UBE3BQ7Z3V4 1068 aa24.77■■□□□ 1.56
MMP28-207ENST00000619655 SPRYD3Q8NCJ5 442 aa24.76■■□□□ 1.55
MMP28-207ENST00000619655 SLKQ9H2G2 1235 aaPredicted RBP24.76■■□□□ 1.55
MMP28-207ENST00000619655 ATG3Q9NT62 314 aa24.76■■□□□ 1.55
MMP28-207ENST00000619655 A0A087WZG4 1122 aa24.75■■□□□ 1.55
MMP28-207ENST00000619655 UBAP1LF5GYI3 381 aa24.75■■□□□ 1.55
MMP28-207ENST00000619655 EPHA10Q5JZY3 1008 aa24.75■■□□□ 1.55
MMP28-207ENST00000619655 SIL1Q9H173 461 aa24.75■■□□□ 1.55
MMP28-207ENST00000619655 STAP2Q9UGK3 403 aa24.75■■□□□ 1.55
MMP28-207ENST00000619655 RTL5Q5HYW3 569 aaPredicted RBP24.74■■□□□ 1.55
MMP28-207ENST00000619655 DNAJC10Q8IXB1 793 aa24.74■■□□□ 1.55
MMP28-207ENST00000619655 KLHDC4Q8TBB5 520 aa24.74■■□□□ 1.55
MMP28-207ENST00000619655 MAP4K4O95819 1239 aaPredicted RBP24.74■■□□□ 1.55
MMP28-207ENST00000619655 SPATA31A1Q5TZJ5 1347 aa24.73■■□□□ 1.55
MMP28-207ENST00000619655 WNK3Q9BYP7 1800 aa24.73■■□□□ 1.55
MMP28-207ENST00000619655 ARXQ96QS3 562 aa24.73■■□□□ 1.55
MMP28-207ENST00000619655 UNC5CLQ8IV45 518 aa24.72■■□□□ 1.55
MMP28-207ENST00000619655 CLASRPQ8N2M8 674 aaKnown RBP24.72■■□□□ 1.55
MMP28-207ENST00000619655 TUBGCP6Q96RT7 1819 aa24.72■■□□□ 1.55
MMP28-207ENST00000619655 DDB1Q16531 1140 aa24.71■■□□□ 1.55
MMP28-207ENST00000619655 NRAPQ86VF7 1730 aa24.71■■□□□ 1.55
MMP28-207ENST00000619655 G3BP1Q13283 466 aaKnown RBP eCLIP24.7■■□□□ 1.55
MMP28-207ENST00000619655 KIF2CQ99661 725 aa24.7■■□□□ 1.55
MMP28-207ENST00000619655 BCL9O00512 1426 aa24.7■■□□□ 1.54
MMP28-207ENST00000619655 PRIM1P49642 420 aaKnown RBP24.7■■□□□ 1.54
MMP28-207ENST00000619655 ERC1Q8IUD2 1116 aa24.7■■□□□ 1.54
MMP28-207ENST00000619655 HSCBQ8IWL3 235 aa24.7■■□□□ 1.54
MMP28-207ENST00000619655 EIF5BO60841 1220 aaKnown RBP24.69■■□□□ 1.54
MMP28-207ENST00000619655 NUP188Q5SRE5 1749 aa24.69■■□□□ 1.54
MMP28-207ENST00000619655 AOX1Q06278 1338 aa24.69■■□□□ 1.54
MMP28-207ENST00000619655 ERC2O15083 957 aa24.68■■□□□ 1.54
MMP28-207ENST00000619655 PI4K2BQ8TCG2 481 aa24.68■■□□□ 1.54
MMP28-207ENST00000619655 USP26Q9BXU7 913 aa24.68■■□□□ 1.54
MMP28-207ENST00000619655 STARD3NLO95772 234 aa24.68■■□□□ 1.54
MMP28-207ENST00000619655 IFIT2P09913 472 aaKnown RBP24.67■■□□□ 1.54
MMP28-207ENST00000619655 AACSQ86V21 672 aa24.67■■□□□ 1.54
MMP28-207ENST00000619655 VSIG10Q8N0Z9 540 aa24.67■■□□□ 1.54
MMP28-207ENST00000619655 ACSBG1Q96GR2 724 aa24.67■■□□□ 1.54
MMP28-207ENST00000619655 TEX13AQ9BXU3 409 aaPredicted RBP24.67■■□□□ 1.54
MMP28-207ENST00000619655 CWC25Q9NXE8 425 aaPredicted RBP24.67■■□□□ 1.54
MMP28-207ENST00000619655 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.67■■□□□ 1.54
MMP28-207ENST00000619655 SASH1O94885 1247 aa24.67■■□□□ 1.54
MMP28-207ENST00000619655 REC8O95072 547 aa24.67■■□□□ 1.54
MMP28-207ENST00000619655 CHMP3Q9Y3E7 222 aa24.67■■□□□ 1.54
MMP28-207ENST00000619655 DOT1LQ8TEK3 1739 aa24.66■■□□□ 1.54
MMP28-207ENST00000619655 CDCA7Q9BWT1 371 aaPredicted RBP24.66■■□□□ 1.54
MMP28-207ENST00000619655 THRAP3Q9Y2W1 955 aaKnown RBP24.66■■□□□ 1.54
MMP28-207ENST00000619655 SLC4A9Q96Q91 983 aa24.65■■□□□ 1.54
MMP28-207ENST00000619655 SPATA31A5Q5VU36 1347 aa24.65■■□□□ 1.54
MMP28-207ENST00000619655 SPATA31A7Q8IWB4 1347 aa24.65■■□□□ 1.54
MMP28-207ENST00000619655 CHMLP26374 656 aa24.64■■□□□ 1.54
MMP28-207ENST00000619655 C8orf37Q96NL8 207 aa24.64■■□□□ 1.54
MMP28-207ENST00000619655 LRP6O75581 1613 aa24.64■■□□□ 1.53
MMP28-207ENST00000619655 AK9Q5TCS8 1911 aa24.64■■□□□ 1.53
MMP28-207ENST00000619655 CASP7P55210 303 aa24.63■■□□□ 1.53
MMP28-207ENST00000619655 KIF6Q6ZMV9 814 aa24.63■■□□□ 1.53
MMP28-207ENST00000619655 ESYT1Q9BSJ8 1104 aa24.63■■□□□ 1.53
MMP28-207ENST00000619655 LMBR1LQ6UX01 489 aa24.63■■□□□ 1.53
MMP28-207ENST00000619655 CCDC8Q9H0W5 538 aaPredicted RBP24.63■■□□□ 1.53
MMP28-207ENST00000619655 H7C1W4 665 aa24.62■■□□□ 1.53
MMP28-207ENST00000619655 CD2BP2O95400 341 aaKnown RBP24.62■■□□□ 1.53
MMP28-207ENST00000619655 MARCH10Q8NA82 808 aaPredicted RBP24.62■■□□□ 1.53
MMP28-207ENST00000619655 EAF2Q96CJ1 260 aaPredicted RBP24.62■■□□□ 1.53
MMP28-207ENST00000619655 SLIT2O94813 1529 aa24.61■■□□□ 1.53
MMP28-207ENST00000619655 RABL6Q3YEC7 729 aaPredicted RBP24.61■■□□□ 1.53
MMP28-207ENST00000619655 TTC41PQ6P2S7 1318 aa24.61■■□□□ 1.53
MMP28-207ENST00000619655 CCDC191Q8NCU4 936 aa24.61■■□□□ 1.53
MMP28-207ENST00000619655 GPATCH3Q96I76 525 aa24.61■■□□□ 1.53
MMP28-207ENST00000619655 ECHDC1Q9NTX5 307 aa24.61■■□□□ 1.53
MMP28-207ENST00000619655 PTPN12Q05209 780 aaKnown RBP24.61■■□□□ 1.53
MMP28-207ENST00000619655 CNTROBQ8N137 903 aa24.61■■□□□ 1.53
MMP28-207ENST00000619655 NGLY1Q96IV0 654 aa24.61■■□□□ 1.53
MMP28-207ENST00000619655 GLRX3O76003 335 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms