RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 AOX1Q06278 1338 aa23.42■■□□□ 1.34
PSPC1-206ENST00000619300 A1BGP04217 495 aa23.42■■□□□ 1.34
PSPC1-206ENST00000619300 TSHZ3Q63HK5 1081 aa23.42■■□□□ 1.34
PSPC1-206ENST00000619300 OS9Q13438 667 aaPredicted RBP23.4■■□□□ 1.34
PSPC1-206ENST00000619300 NBR1Q14596 966 aa23.4■■□□□ 1.34
PSPC1-206ENST00000619300 PHLPP1O60346 1717 aa23.4■■□□□ 1.34
PSPC1-206ENST00000619300 PIP4K2BP78356 416 aa23.4■■□□□ 1.34
PSPC1-206ENST00000619300 NUTM1Q86Y26 1132 aa23.4■■□□□ 1.34
PSPC1-206ENST00000619300 ASAP1Q9ULH1 1129 aa23.4■■□□□ 1.34
PSPC1-206ENST00000619300 TOGARAM1Q9Y4F4 1720 aa23.39■■□□□ 1.34
PSPC1-206ENST00000619300 VSIG10Q8N0Z9 540 aa23.39■■□□□ 1.34
PSPC1-206ENST00000619300 TEX13AQ9BXU3 409 aaPredicted RBP23.39■■□□□ 1.34
PSPC1-206ENST00000619300 ERC1Q8IUD2 1116 aa23.38■■□□□ 1.33
PSPC1-206ENST00000619300 ATG3Q9NT62 314 aa23.38■■□□□ 1.33
PSPC1-206ENST00000619300 ATP5J2-PTCD1G3V325 749 aa23.38■■□□□ 1.33
PSPC1-206ENST00000619300 TTLL7Q6ZT98 887 aa23.38■■□□□ 1.33
PSPC1-206ENST00000619300 KIF2CQ99661 725 aa23.38■■□□□ 1.33
PSPC1-206ENST00000619300 CDCA7Q9BWT1 371 aaPredicted RBP23.38■■□□□ 1.33
PSPC1-206ENST00000619300 PA2G4Q9UQ80 394 aaKnown RBP23.38■■□□□ 1.33
PSPC1-206ENST00000619300 THRAP3Q9Y2W1 955 aaKnown RBP23.37■■□□□ 1.33
PSPC1-206ENST00000619300 USP26Q9BXU7 913 aa23.37■■□□□ 1.33
PSPC1-206ENST00000619300 SPATA31A1Q5TZJ5 1347 aa23.36■■□□□ 1.33
PSPC1-206ENST00000619300 A0A087WZG4 1122 aa23.35■■□□□ 1.33
PSPC1-206ENST00000619300 NUTM2BA6NNL0 878 aaPredicted RBP23.35■■□□□ 1.33
PSPC1-206ENST00000619300 NUTM2EB1AL46 878 aaPredicted RBP23.35■■□□□ 1.33
PSPC1-206ENST00000619300 TRIM6-TRIM34B2RNG4 842 aa23.35■■□□□ 1.33
PSPC1-206ENST00000619300 EPHA10Q5JZY3 1008 aa23.35■■□□□ 1.33
PSPC1-206ENST00000619300 NUTM2AQ8IVF1 878 aaPredicted RBP23.35■■□□□ 1.33
PSPC1-206ENST00000619300 CLASRPQ8N2M8 674 aaKnown RBP23.35■■□□□ 1.33
PSPC1-206ENST00000619300 COL15A1P39059 1388 aa23.35■■□□□ 1.33
PSPC1-206ENST00000619300 PLCH1Q4KWH8 1693 aa23.35■■□□□ 1.33
PSPC1-206ENST00000619300 ERC2O15083 957 aa23.34■■□□□ 1.33
PSPC1-206ENST00000619300 REC8O95072 547 aa23.34■■□□□ 1.33
PSPC1-206ENST00000619300 G3BP1Q13283 466 aaKnown RBP eCLIP23.34■■□□□ 1.33
PSPC1-206ENST00000619300 UBE3BQ7Z3V4 1068 aa23.34■■□□□ 1.33
PSPC1-206ENST00000619300 SNX21Q969T3 373 aa23.34■■□□□ 1.33
PSPC1-206ENST00000619300 RILPL2Q969X0 211 aa23.34■■□□□ 1.33
PSPC1-206ENST00000619300 BCL9O00512 1426 aa23.33■■□□□ 1.33
PSPC1-206ENST00000619300 PI4K2BQ8TCG2 481 aa23.33■■□□□ 1.33
PSPC1-206ENST00000619300 JARID2Q92833 1246 aaPredicted RBP23.33■■□□□ 1.33
PSPC1-206ENST00000619300 DNAJC10Q8IXB1 793 aa23.33■■□□□ 1.32
PSPC1-206ENST00000619300 RBM42Q9BTD8 480 aaKnown RBP23.33■■□□□ 1.32
PSPC1-206ENST00000619300 USP42Q9H9J4 1324 aaKnown RBP23.33■■□□□ 1.32
PSPC1-206ENST00000619300 ARFGEF2Q9Y6D5 1785 aa23.32■■□□□ 1.32
PSPC1-206ENST00000619300 STARD3NLO95772 234 aa23.32■■□□□ 1.32
PSPC1-206ENST00000619300 CASP7P55210 303 aa23.32■■□□□ 1.32
PSPC1-206ENST00000619300 HSCBQ8IWL3 235 aa23.32■■□□□ 1.32
PSPC1-206ENST00000619300 H7C1W4 665 aa23.32■■□□□ 1.32
PSPC1-206ENST00000619300 RABL6Q3YEC7 729 aaPredicted RBP23.32■■□□□ 1.32
PSPC1-206ENST00000619300 UNC5CLQ8IV45 518 aa23.31■■□□□ 1.32
PSPC1-206ENST00000619300 ZBTB3Q9H5J0 574 aa23.31■■□□□ 1.32
PSPC1-206ENST00000619300 CWC25Q9NXE8 425 aaPredicted RBP23.31■■□□□ 1.32
PSPC1-206ENST00000619300 TTC41PQ6P2S7 1318 aa23.31■■□□□ 1.32
PSPC1-206ENST00000619300 LRP6O75581 1613 aa23.3■■□□□ 1.32
PSPC1-206ENST00000619300 SASH1O94885 1247 aa23.3■■□□□ 1.32
PSPC1-206ENST00000619300 CHMLP26374 656 aa23.3■■□□□ 1.32
PSPC1-206ENST00000619300 DDB1Q16531 1140 aa23.3■■□□□ 1.32
PSPC1-206ENST00000619300 SYTL4Q96C24 671 aaPredicted RBP23.3■■□□□ 1.32
PSPC1-206ENST00000619300 UBAP1LF5GYI3 381 aa23.29■■□□□ 1.32
PSPC1-206ENST00000619300 PRIM1P49642 420 aaKnown RBP23.29■■□□□ 1.32
PSPC1-206ENST00000619300 CCDC191Q8NCU4 936 aa23.29■■□□□ 1.32
PSPC1-206ENST00000619300 ESYT1Q9BSJ8 1104 aa23.29■■□□□ 1.32
PSPC1-206ENST00000619300 SPATA31A5Q5VU36 1347 aa23.29■■□□□ 1.32
PSPC1-206ENST00000619300 SPATA31A7Q8IWB4 1347 aa23.29■■□□□ 1.32
PSPC1-206ENST00000619300 IFIT2P09913 472 aaKnown RBP23.28■■□□□ 1.32
PSPC1-206ENST00000619300 ANTXR1Q9H6X2 564 aa23.28■■□□□ 1.32
PSPC1-206ENST00000619300 COPRSQ9NQ92 184 aa23.28■■□□□ 1.32
PSPC1-206ENST00000619300 ITGB4P16144 1822 aa23.28■■□□□ 1.32
PSPC1-206ENST00000619300 GLRX3O76003 335 aaKnown RBP23.28■■□□□ 1.32
PSPC1-206ENST00000619300 SLKQ9H2G2 1235 aaPredicted RBP23.28■■□□□ 1.32
PSPC1-206ENST00000619300 TUBGCP6Q96RT7 1819 aa23.27■■□□□ 1.32
PSPC1-206ENST00000619300 NRAPQ86VF7 1730 aa23.27■■□□□ 1.32
PSPC1-206ENST00000619300 RFX5P48382 616 aaPredicted RBP23.27■■□□□ 1.32
PSPC1-206ENST00000619300 KLHDC4Q8TBB5 520 aa23.27■■□□□ 1.32
PSPC1-206ENST00000619300 GPATCH3Q96I76 525 aa23.27■■□□□ 1.32
PSPC1-206ENST00000619300 SIL1Q9H173 461 aa23.27■■□□□ 1.32
PSPC1-206ENST00000619300 ECHDC1Q9NTX5 307 aa23.27■■□□□ 1.32
PSPC1-206ENST00000619300 RTL5Q5HYW3 569 aaPredicted RBP23.26■■□□□ 1.31
PSPC1-206ENST00000619300 AACSQ86V21 672 aa23.26■■□□□ 1.31
PSPC1-206ENST00000619300 SLC4A9Q96Q91 983 aa23.26■■□□□ 1.31
PSPC1-206ENST00000619300 AFDNP55196 1824 aaKnown RBP23.26■■□□□ 1.31
PSPC1-206ENST00000619300 BARGINQ6ZT62 677 aa23.26■■□□□ 1.31
PSPC1-206ENST00000619300 SLIT2O94813 1529 aa23.26■■□□□ 1.31
PSPC1-206ENST00000619300 PTPN12Q05209 780 aaKnown RBP23.25■■□□□ 1.31
PSPC1-206ENST00000619300 TCIRG1Q13488 830 aa23.25■■□□□ 1.31
PSPC1-206ENST00000619300 CNTROBQ8N137 903 aa23.25■■□□□ 1.31
PSPC1-206ENST00000619300 WNK3Q9BYP7 1800 aa23.25■■□□□ 1.31
PSPC1-206ENST00000619300 MAP4K4O95819 1239 aaPredicted RBP23.25■■□□□ 1.31
PSPC1-206ENST00000619300 CYP19A1P11511 503 aaPredicted RBP23.25■■□□□ 1.31
PSPC1-206ENST00000619300 FOXO4P98177 505 aa23.25■■□□□ 1.31
PSPC1-206ENST00000619300 RABEP1Q15276 862 aa23.25■■□□□ 1.31
PSPC1-206ENST00000619300 EAF2Q96CJ1 260 aaPredicted RBP23.25■■□□□ 1.31
PSPC1-206ENST00000619300 ISCA1Q9BUE6 129 aa23.25■■□□□ 1.31
PSPC1-206ENST00000619300 ZNF330Q9Y3S2 320 aaPredicted RBP23.25■■□□□ 1.31
PSPC1-206ENST00000619300 CCDC9Q9Y3X0 531 aaKnown RBP23.25■■□□□ 1.31
PSPC1-206ENST00000619300 NUP188Q5SRE5 1749 aa23.24■■□□□ 1.31
PSPC1-206ENST00000619300 NFKBIBQ15653 356 aa23.24■■□□□ 1.31
PSPC1-206ENST00000619300 LMBR1LQ6UX01 489 aa23.24■■□□□ 1.31
PSPC1-206ENST00000619300 KIF6Q6ZMV9 814 aa23.24■■□□□ 1.31
PSPC1-206ENST00000619300 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms