RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 RNF216Q9NWF9 866 aaPredicted RBP18.86■□□□□ 0.61
CNTNAP3B-214ENST00000618777 GLRX3O76003 335 aaKnown RBP18.86■□□□□ 0.61
CNTNAP3B-214ENST00000618777 HDXQ7Z353 690 aa18.86■□□□□ 0.61
CNTNAP3B-214ENST00000618777 RAB11FIP3O75154 756 aa18.86■□□□□ 0.61
CNTNAP3B-214ENST00000618777 CPLX4Q7Z7G2 160 aa18.86■□□□□ 0.61
CNTNAP3B-214ENST00000618777 SIL1Q9H173 461 aa18.86■□□□□ 0.61
CNTNAP3B-214ENST00000618777 U3KPZ7 1027 aaPredicted RBP18.86■□□□□ 0.61
CNTNAP3B-214ENST00000618777 BIN1O00499 593 aa18.86■□□□□ 0.61
CNTNAP3B-214ENST00000618777 CCDC129Q6ZRS4 1044 aa18.86■□□□□ 0.61
CNTNAP3B-214ENST00000618777 IL1RAPL2Q9NP60 686 aa18.86■□□□□ 0.61
CNTNAP3B-214ENST00000618777 PHACTR2O75167 634 aa18.85■□□□□ 0.61
CNTNAP3B-214ENST00000618777 IFI16Q16666 785 aaKnown RBP18.85■□□□□ 0.61
CNTNAP3B-214ENST00000618777 KRI1Q8N9T8 703 aaKnown RBP18.85■□□□□ 0.61
CNTNAP3B-214ENST00000618777 LUC7L2Q9Y383 392 aaKnown RBP18.85■□□□□ 0.61
CNTNAP3B-214ENST00000618777 ZNF853P0CG23 659 aa18.85■□□□□ 0.61
CNTNAP3B-214ENST00000618777 UBASH3AP57075 661 aa18.85■□□□□ 0.61
CNTNAP3B-214ENST00000618777 HDGFL1Q5TGJ6 251 aa18.85■□□□□ 0.61
CNTNAP3B-214ENST00000618777 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.85■□□□□ 0.61
CNTNAP3B-214ENST00000618777 PIBF1Q8WXW3 757 aa18.85■□□□□ 0.61
CNTNAP3B-214ENST00000618777 A0A1W2PRG0 241 aa18.84■□□□□ 0.61
CNTNAP3B-214ENST00000618777 CTAGE9A4FU28 777 aa18.84■□□□□ 0.61
CNTNAP3B-214ENST00000618777 SMC6Q96SB8 1091 aa18.84■□□□□ 0.61
CNTNAP3B-214ENST00000618777 BCL2L12Q9HB09 334 aa18.84■□□□□ 0.61
CNTNAP3B-214ENST00000618777 BMP2KLQ5H9B9 411 aa18.84■□□□□ 0.61
CNTNAP3B-214ENST00000618777 TFIP11Q9UBB9 837 aaKnown RBP18.84■□□□□ 0.61
CNTNAP3B-214ENST00000618777 KIAA0753Q2KHM9 967 aa18.84■□□□□ 0.61
CNTNAP3B-214ENST00000618777 ZEB2O60315 1214 aa18.84■□□□□ 0.61
CNTNAP3B-214ENST00000618777 NOL3O60936 208 aaKnown RBP18.84■□□□□ 0.61
CNTNAP3B-214ENST00000618777 MXRA7P84157 204 aa18.84■□□□□ 0.61
CNTNAP3B-214ENST00000618777 SEPT14Q6ZU15 432 aa18.84■□□□□ 0.61
CNTNAP3B-214ENST00000618777 TEX2Q8IWB9 1127 aa18.84■□□□□ 0.61
CNTNAP3B-214ENST00000618777 GJB2P29033 226 aa18.83■□□□□ 0.61
CNTNAP3B-214ENST00000618777 RAPGEF4Q8WZA2 1011 aa18.83■□□□□ 0.61
CNTNAP3B-214ENST00000618777 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.83■□□□□ 0.61
CNTNAP3B-214ENST00000618777 MTIF2P46199 727 aaKnown RBP18.83■□□□□ 0.61
CNTNAP3B-214ENST00000618777 DBN1Q16643 649 aa18.83■□□□□ 0.61
CNTNAP3B-214ENST00000618777 A6NNZ2 444 aa18.83■□□□□ 0.6
CNTNAP3B-214ENST00000618777 CYLC1P35663 651 aaPredicted RBP18.83■□□□□ 0.6
CNTNAP3B-214ENST00000618777 TUBB8Q3ZCM7 444 aa18.83■□□□□ 0.6
CNTNAP3B-214ENST00000618777 ANO6Q4KMQ2 910 aa18.83■□□□□ 0.6
CNTNAP3B-214ENST00000618777 KANK3Q6NY19 840 aa18.83■□□□□ 0.6
CNTNAP3B-214ENST00000618777 WHAMMP3Q1A5X7 153 aa18.82■□□□□ 0.6
CNTNAP3B-214ENST00000618777 GNL3LQ9NVN8 582 aaKnown RBP18.82■□□□□ 0.6
CNTNAP3B-214ENST00000618777 PLEKHH2Q8IVE3 1493 aa18.82■□□□□ 0.6
CNTNAP3B-214ENST00000618777 C20orf194Q5TEA3 1177 aa18.82■□□□□ 0.6
CNTNAP3B-214ENST00000618777 PRPF4BQ13523 1007 aaKnown RBP18.82■□□□□ 0.6
CNTNAP3B-214ENST00000618777 RPUSD2Q8IZ73 545 aaKnown RBP18.82■□□□□ 0.6
CNTNAP3B-214ENST00000618777 KIF1BPQ96EK5 621 aa18.82■□□□□ 0.6
CNTNAP3B-214ENST00000618777 BUB1BO60566 1050 aaPredicted RBP18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 RLBP1P12271 317 aa18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 NOP2P46087 812 aaKnown RBP18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 SAMD15Q9P1V8 674 aa18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 VEZTQ9HBM0 779 aa18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 SERPINA10Q9UK55 444 aa18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 MYOM3Q5VTT5 1437 aa18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 CCDC77Q9BR77 488 aa18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 CCDC196A0A1B0GTZ2 297 aa18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 AKR1B10O60218 316 aa18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 ARHGAP25P42331 645 aa18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 MICAL1Q8TDZ2 1067 aa18.81■□□□□ 0.6
CNTNAP3B-214ENST00000618777 MACROD2A1Z1Q3 448 aa18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 CCDC102BQ68D86 513 aa18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 CTAGE1Q96RT6 745 aa18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 JRKLQ9Y4A0 524 aa18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 FGD6Q6ZV73 1430 aa18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 ZSCAN22P10073 491 aaPredicted RBP18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 PPP1R14CQ8TAE6 165 aa18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 CECR2Q9BXF3 1484 aa18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 N4BP3O15049 544 aa18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 FERP16591 822 aa18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 PCK1P35558 622 aa18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 PEX19P40855 299 aa18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 IFT74Q96LB3 600 aa18.8■□□□□ 0.6
CNTNAP3B-214ENST00000618777 SYT1P21579 422 aa18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 TBC1D9Q6ZT07 1266 aa18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 AFAP1L1Q8TED9 768 aa18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 PYM1Q9BRP8 204 aaKnown RBP18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 ZSCAN16Q9H4T2 348 aaPredicted RBP18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 EXOC6BQ9Y2D4 811 aa18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 IKBKGQ9Y6K9 419 aa18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 ZNF500O60304 480 aaPredicted RBP18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 CNNM1Q9NRU3 951 aa18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 CCDC96Q2M329 555 aa18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 EVA1CP58658 441 aa18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 ZBTB16Q05516 673 aa18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 SETDB1Q15047 1291 aa18.79■□□□□ 0.6
CNTNAP3B-214ENST00000618777 TACC1O75410 805 aa18.78■□□□□ 0.6
CNTNAP3B-214ENST00000618777 NUTM1Q86Y26 1132 aa18.78■□□□□ 0.6
CNTNAP3B-214ENST00000618777 SNX21Q969T3 373 aa18.78■□□□□ 0.6
CNTNAP3B-214ENST00000618777 DDX23Q9BUQ8 820 aaKnown RBP18.78■□□□□ 0.6
CNTNAP3B-214ENST00000618777 LRPPRCP42704 1394 aaKnown RBP18.78■□□□□ 0.6
CNTNAP3B-214ENST00000618777 MAP3K9P80192 1104 aa18.78■□□□□ 0.6
CNTNAP3B-214ENST00000618777 RARSP54136 660 aaKnown RBP18.78■□□□□ 0.6
CNTNAP3B-214ENST00000618777 GUCY1B3Q02153 619 aa18.78■□□□□ 0.6
CNTNAP3B-214ENST00000618777 SELENOOQ9BVL4 669 aa18.78■□□□□ 0.6
CNTNAP3B-214ENST00000618777 ATP11AP98196 1134 aa18.78■□□□□ 0.6
CNTNAP3B-214ENST00000618777 FKBP4Q02790 459 aaKnown RBP eCLIP18.78■□□□□ 0.6
CNTNAP3B-214ENST00000618777 CACNA2D3Q8IZS8 1091 aa18.78■□□□□ 0.6
CNTNAP3B-214ENST00000618777 VAV2P52735 878 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms