RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 MAP3K15Q6ZN16 1313 aa20.15■□□□□ 0.82
RPP40-207ENST00000618533 C10orf71Q711Q0 1435 aa20.15■□□□□ 0.82
RPP40-207ENST00000618533 CARMIL3Q8ND23 1372 aa20.14■□□□□ 0.81
RPP40-207ENST00000618533 DDR1Q08345 913 aa20.14■□□□□ 0.81
RPP40-207ENST00000618533 CCDC30Q5VVM6 783 aa20.14■□□□□ 0.81
RPP40-207ENST00000618533 CHPF2Q9P2E5 772 aa20.14■□□□□ 0.81
RPP40-207ENST00000618533 E9PSI1 815 aa20.13■□□□□ 0.81
RPP40-207ENST00000618533 TWISTNBQ3B726 338 aaPredicted RBP20.13■□□□□ 0.81
RPP40-207ENST00000618533 TBC1D9BQ66K14 1250 aa20.13■□□□□ 0.81
RPP40-207ENST00000618533 KLHL34Q8N239 644 aa20.13■□□□□ 0.81
RPP40-207ENST00000618533 NECTIN2Q92692 538 aa20.13■□□□□ 0.81
RPP40-207ENST00000618533 SETDB2Q96T68 719 aa20.13■□□□□ 0.81
RPP40-207ENST00000618533 ATP10DQ9P241 1426 aa20.12■□□□□ 0.81
RPP40-207ENST00000618533 ELL2O00472 640 aaPredicted RBP20.12■□□□□ 0.81
RPP40-207ENST00000618533 PROSER3Q2NL68 480 aa20.12■□□□□ 0.81
RPP40-207ENST00000618533 ANKRD36CQ5JPF3 1778 aa20.11■□□□□ 0.81
RPP40-207ENST00000618533 SERPINB2P05120 415 aa20.11■□□□□ 0.81
RPP40-207ENST00000618533 TTLL7Q6ZT98 887 aa20.11■□□□□ 0.81
RPP40-207ENST00000618533 TSPYL6Q8N831 410 aa20.11■□□□□ 0.81
RPP40-207ENST00000618533 SPINK5Q9NQ38 1064 aaPredicted RBP20.11■□□□□ 0.81
RPP40-207ENST00000618533 DCAF8L1A6NGE4 600 aa20.1■□□□□ 0.81
RPP40-207ENST00000618533 TGFB2P61812 414 aa20.1■□□□□ 0.81
RPP40-207ENST00000618533 GIGYF2Q6Y7W6 1299 aaKnown RBP20.1■□□□□ 0.81
RPP40-207ENST00000618533 COPS6Q7L5N1 327 aa20.1■□□□□ 0.81
RPP40-207ENST00000618533 STK31Q9BXU1 1019 aa20.1■□□□□ 0.81
RPP40-207ENST00000618533 ANXA1P04083 346 aa20.09■□□□□ 0.81
RPP40-207ENST00000618533 EXOSC9Q06265 439 aaKnown RBP20.09■□□□□ 0.81
RPP40-207ENST00000618533 HSP90AB3PQ58FF7 597 aa20.09■□□□□ 0.81
RPP40-207ENST00000618533 BICDL1Q6ZP65 573 aa20.09■□□□□ 0.81
RPP40-207ENST00000618533 XAGE3Q8WTP9 111 aa20.09■□□□□ 0.81
RPP40-207ENST00000618533 KIAA1551Q9HCM1 1747 aa20.08■□□□□ 0.81
RPP40-207ENST00000618533 HLFQ16534 295 aa20.08■□□□□ 0.81
RPP40-207ENST00000618533 ZBTB3Q9H5J0 574 aa20.08■□□□□ 0.81
RPP40-207ENST00000618533 NIP7Q9Y221 180 aaKnown RBP eCLIP20.08■□□□□ 0.81
RPP40-207ENST00000618533 IBTKQ9P2D0 1353 aaPredicted RBP20.08■□□□□ 0.8
RPP40-207ENST00000618533 VAMP4O75379 141 aa20.07■□□□□ 0.8
RPP40-207ENST00000618533 SLFN5Q08AF3 891 aa20.07■□□□□ 0.8
RPP40-207ENST00000618533 PLBD2Q8NHP8 589 aa20.07■□□□□ 0.8
RPP40-207ENST00000618533 PDZRN3Q9UPQ7 1066 aa20.07■□□□□ 0.8
RPP40-207ENST00000618533 AIMP1Q12904 312 aaKnown RBP20.06■□□□□ 0.8
RPP40-207ENST00000618533 ANKRD13DQ6ZTN6 518 aa20.06■□□□□ 0.8
RPP40-207ENST00000618533 CNBD1Q8NA66 436 aa20.06■□□□□ 0.8
RPP40-207ENST00000618533 NLGN2Q8NFZ4 835 aa20.06■□□□□ 0.8
RPP40-207ENST00000618533 ARFGEF2Q9Y6D5 1785 aa20.06■□□□□ 0.8
RPP40-207ENST00000618533 PXDNLA1KZ92 1463 aa20.05■□□□□ 0.8
RPP40-207ENST00000618533 DDX58O95786 925 aaKnown RBP20.05■□□□□ 0.8
RPP40-207ENST00000618533 PARP10Q53GL7 1025 aa20.05■□□□□ 0.8
RPP40-207ENST00000618533 TPTE2Q6XPS3 522 aa20.05■□□□□ 0.8
RPP40-207ENST00000618533 NBPF5PQ86XG9 351 aaPredicted RBP20.05■□□□□ 0.8
RPP40-207ENST00000618533 ZNF34Q8IZ26 560 aa20.05■□□□□ 0.8
RPP40-207ENST00000618533 NYXQ9GZU5 481 aa20.05■□□□□ 0.8
RPP40-207ENST00000618533 BRCA1P38398 1863 aaKnown RBP20.05■□□□□ 0.8
RPP40-207ENST00000618533 N4BP2Q86UW6 1770 aaPredicted RBP20.04■□□□□ 0.8
RPP40-207ENST00000618533 DLEC1Q9Y238 1755 aa20.04■□□□□ 0.8
RPP40-207ENST00000618533 ST5P78524 1137 aa20.04■□□□□ 0.8
RPP40-207ENST00000618533 PRR5LQ6MZQ0 368 aa20.04■□□□□ 0.8
RPP40-207ENST00000618533 TRMT2AQ8IZ69 625 aaKnown RBP20.04■□□□□ 0.8
RPP40-207ENST00000618533 ZNF428Q96B54 188 aa20.04■□□□□ 0.8
RPP40-207ENST00000618533 ANKRD31Q8N7Z5 1873 aa20.03■□□□□ 0.8
RPP40-207ENST00000618533 NPHP1O15259 732 aa20.03■□□□□ 0.8
RPP40-207ENST00000618533 HNRNPUQ00839 825 aaKnown RBP eCLIP20.03■□□□□ 0.8
RPP40-207ENST00000618533 BRIP1Q9BX63 1249 aa20.03■□□□□ 0.8
RPP40-207ENST00000618533 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.8
RPP40-207ENST00000618533 CT47B1P0C2W7 299 aaPredicted RBP20.02■□□□□ 0.8
RPP40-207ENST00000618533 TCIRG1Q13488 830 aa20.02■□□□□ 0.8
RPP40-207ENST00000618533 SLC4A2P04920 1241 aa20.01■□□□□ 0.79
RPP40-207ENST00000618533 PDE6BP35913 854 aa20.01■□□□□ 0.79
RPP40-207ENST00000618533 PPP1R42Q7Z4L9 355 aa20.01■□□□□ 0.79
RPP40-207ENST00000618533 PHAXQ9H814 394 aaKnown RBP20.01■□□□□ 0.79
RPP40-207ENST00000618533 RIC1Q4ADV7 1423 aa20.01■□□□□ 0.79
RPP40-207ENST00000618533 RIC3Q7Z5B4 369 aa20■□□□□ 0.79
RPP40-207ENST00000618533 CDCA7LQ96GN5 454 aa20■□□□□ 0.79
RPP40-207ENST00000618533 UBN2Q6ZU65 1347 aa20■□□□□ 0.79
RPP40-207ENST00000618533 DPEP1P16444 411 aa19.99■□□□□ 0.79
RPP40-207ENST00000618533 GPTP24298 496 aa19.99■□□□□ 0.79
RPP40-207ENST00000618533 ZBED9Q6R2W3 1325 aa19.99■□□□□ 0.79
RPP40-207ENST00000618533 ARFGEF1Q9Y6D6 1849 aa19.98■□□□□ 0.79
RPP40-207ENST00000618533 GTF2E1P29083 439 aaPredicted RBP19.98■□□□□ 0.79
RPP40-207ENST00000618533 TRIM28Q13263 835 aaKnown RBP19.98■□□□□ 0.79
RPP40-207ENST00000618533 GPR162Q16538 588 aa19.98■□□□□ 0.79
RPP40-207ENST00000618533 KSR2Q6VAB6 950 aa19.98■□□□□ 0.79
RPP40-207ENST00000618533 A0A0G2JLW4 131 aa19.97■□□□□ 0.79
RPP40-207ENST00000618533 H0YIN7 160 aa19.97■□□□□ 0.79
RPP40-207ENST00000618533 GRIN3BO60391 1043 aa19.97■□□□□ 0.79
RPP40-207ENST00000618533 FLIIQ13045 1269 aa19.97■□□□□ 0.79
RPP40-207ENST00000618533 NLRP10Q86W26 655 aa19.97■□□□□ 0.79
RPP40-207ENST00000618533 ISCA1Q9BUE6 129 aa19.97■□□□□ 0.79
RPP40-207ENST00000618533 UTP14AQ9BVJ6 771 aaKnown RBP19.97■□□□□ 0.79
RPP40-207ENST00000618533 PIM2Q9P1W9 311 aa19.97■□□□□ 0.79
RPP40-207ENST00000618533 NTSR2O95665 410 aa19.96■□□□□ 0.79
RPP40-207ENST00000618533 KCNA3P22001 575 aa19.96■□□□□ 0.79
RPP40-207ENST00000618533 SUSD4Q5VX71 490 aa19.96■□□□□ 0.79
RPP40-207ENST00000618533 COL11A2P13942 1736 aaPredicted RBP19.96■□□□□ 0.79
RPP40-207ENST00000618533 KLRG2A4D1S0 409 aaPredicted RBP19.95■□□□□ 0.78
RPP40-207ENST00000618533 TCERG1O14776 1098 aaKnown RBP19.95■□□□□ 0.78
RPP40-207ENST00000618533 C2CD5Q86YS7 1000 aa19.95■□□□□ 0.78
RPP40-207ENST00000618533 METTL22Q9BUU2 404 aaPredicted RBP19.95■□□□□ 0.78
RPP40-207ENST00000618533 CHD4Q14839 1912 aa19.95■□□□□ 0.78
RPP40-207ENST00000618533 PI4KAP2A4QPH2 592 aa19.94■□□□□ 0.78
RPP40-207ENST00000618533 FAM177BA6PVY3 158 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms