RNA–Protein interactions for RNA: ENST00000617948.4

DEF8-229, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

APPRIS P4 TSL 5 BASIC

Gene DEF8, Length 3,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-229ENST00000617948 SEPT12Q8IYM1 358 aa13.55□□□□□ -0.24
DEF8-229ENST00000617948 CDC45O75419 566 aa13.55□□□□□ -0.24
DEF8-229ENST00000617948 MX1P20591 662 aa13.55□□□□□ -0.24
DEF8-229ENST00000617948 INTS3Q68E01 1043 aaKnown RBP13.55□□□□□ -0.24
DEF8-229ENST00000617948 ANKRD44Q8N8A2 993 aa13.55□□□□□ -0.24
DEF8-229ENST00000617948 ERVV-2B6SEH9 535 aa13.54□□□□□ -0.24
DEF8-229ENST00000617948 SEC24BO95487 1268 aa13.54□□□□□ -0.24
DEF8-229ENST00000617948 HSP90B1P14625 803 aaKnown RBP13.54□□□□□ -0.24
DEF8-229ENST00000617948 GLIPR1L2Q4G1C9 344 aa13.54□□□□□ -0.24
DEF8-229ENST00000617948 LOC102724428A0A0B4J2F2 783 aa13.54□□□□□ -0.24
DEF8-229ENST00000617948 APBA3O96018 575 aa13.54□□□□□ -0.24
DEF8-229ENST00000617948 SIK1P57059 783 aa13.54□□□□□ -0.24
DEF8-229ENST00000617948 RTCBQ9Y3I0 505 aaKnown RBP13.54□□□□□ -0.24
DEF8-229ENST00000617948 RTL1A6NKG5 1358 aa13.54□□□□□ -0.24
DEF8-229ENST00000617948 CHAF1AQ13111 956 aaPredicted RBP13.54□□□□□ -0.24
DEF8-229ENST00000617948 TTC39AQ5SRH9 613 aa13.54□□□□□ -0.24
DEF8-229ENST00000617948 SMARCC1Q92922 1105 aaPredicted RBP13.54□□□□□ -0.24
DEF8-229ENST00000617948 USP44Q9H0E7 712 aa13.54□□□□□ -0.24
DEF8-229ENST00000617948 KDM4AO75164 1064 aa13.53□□□□□ -0.24
DEF8-229ENST00000617948 IDH1O75874 414 aaKnown RBP13.53□□□□□ -0.24
DEF8-229ENST00000617948 TRPC5Q9UL62 973 aaPredicted RBP13.53□□□□□ -0.24
DEF8-229ENST00000617948 REC8O95072 547 aa13.53□□□□□ -0.24
DEF8-229ENST00000617948 CNTROBQ8N137 903 aa13.53□□□□□ -0.24
DEF8-229ENST00000617948 RHPN1Q8TCX5 695 aa13.53□□□□□ -0.24
DEF8-229ENST00000617948 SETDB2Q96T68 719 aa13.53□□□□□ -0.24
DEF8-229ENST00000617948 LRRC7Q96NW7 1537 aa13.52□□□□□ -0.24
DEF8-229ENST00000617948 CDCA7Q9BWT1 371 aaPredicted RBP13.52□□□□□ -0.24
DEF8-229ENST00000617948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.24
DEF8-229ENST00000617948 NDUFB9Q9Y6M9 179 aa13.52□□□□□ -0.24
DEF8-229ENST00000617948 KDM2BQ8NHM5 1336 aa13.52□□□□□ -0.24
DEF8-229ENST00000617948 IGHMBP2P38935 993 aaKnown RBP13.52□□□□□ -0.25
DEF8-229ENST00000617948 CCDC158Q5M9N0 1113 aa13.52□□□□□ -0.25
DEF8-229ENST00000617948 ERC1Q8IUD2 1116 aa13.52□□□□□ -0.25
DEF8-229ENST00000617948 MTMR7Q9Y216 660 aa13.52□□□□□ -0.25
DEF8-229ENST00000617948 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
DEF8-229ENST00000617948 GOLGA6L22H0YM25 854 aa13.51□□□□□ -0.25
DEF8-229ENST00000617948 JAG2Q9Y219 1238 aa13.51□□□□□ -0.25
DEF8-229ENST00000617948 IRS4O14654 1257 aaPredicted RBP13.51□□□□□ -0.25
DEF8-229ENST00000617948 RAD21O60216 631 aa13.51□□□□□ -0.25
DEF8-229ENST00000617948 TIMM10P62072 90 aa13.51□□□□□ -0.25
DEF8-229ENST00000617948 ATP8B2P98198 1209 aa13.51□□□□□ -0.25
DEF8-229ENST00000617948 RUFY2Q8WXA3 655 aa13.51□□□□□ -0.25
DEF8-229ENST00000617948 ANKIB1Q9P2G1 1089 aa13.51□□□□□ -0.25
DEF8-229ENST00000617948 HSP90AB3PQ58FF7 597 aa13.5□□□□□ -0.25
DEF8-229ENST00000617948 MSL1Q68DK7 614 aa13.5□□□□□ -0.25
DEF8-229ENST00000617948 ANKRD18BA2A2Z9 1011 aa13.5□□□□□ -0.25
DEF8-229ENST00000617948 METTL22Q9BUU2 404 aaPredicted RBP13.5□□□□□ -0.25
DEF8-229ENST00000617948 PLBD2Q8NHP8 589 aa13.5□□□□□ -0.25
DEF8-229ENST00000617948 CCDC87Q9NVE4 849 aa13.5□□□□□ -0.25
DEF8-229ENST00000617948 FOSBP53539 338 aa13.49□□□□□ -0.25
DEF8-229ENST00000617948 GCKRQ14397 625 aa13.49□□□□□ -0.25
DEF8-229ENST00000617948 LARP6Q9BRS8 491 aaKnown RBP13.49□□□□□ -0.25
DEF8-229ENST00000617948 ALDH1L1O75891 902 aa13.49□□□□□ -0.25
DEF8-229ENST00000617948 HDAC1Q13547 482 aaPredicted RBP13.49□□□□□ -0.25
DEF8-229ENST00000617948 DDX46Q7L014 1031 aaKnown RBP13.49□□□□□ -0.25
DEF8-229ENST00000617948 NEK4P51957 841 aa13.49□□□□□ -0.25
DEF8-229ENST00000617948 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
DEF8-229ENST00000617948 SYNE4Q8N205 404 aa13.49□□□□□ -0.25
DEF8-229ENST00000617948 UPF3BQ9BZI7 483 aaKnown RBP13.49□□□□□ -0.25
DEF8-229ENST00000617948 KIF24Q5T7B8 1368 aa13.49□□□□□ -0.25
DEF8-229ENST00000617948 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.49□□□□□ -0.25
DEF8-229ENST00000617948 MAP2P11137 1827 aaKnown RBP13.48□□□□□ -0.25
DEF8-229ENST00000617948 ZNF622Q969S3 477 aaKnown RBP eCLIP13.48□□□□□ -0.25
DEF8-229ENST00000617948 NEURL4Q96JN8 1562 aa13.48□□□□□ -0.25
DEF8-229ENST00000617948 MED14O60244 1454 aa13.48□□□□□ -0.25
DEF8-229ENST00000617948 ZKSCAN1P17029 563 aaPredicted RBP13.48□□□□□ -0.25
DEF8-229ENST00000617948 CRKLP46109 303 aaKnown RBP13.48□□□□□ -0.25
DEF8-229ENST00000617948 NUCB1Q02818 461 aa13.48□□□□□ -0.25
DEF8-229ENST00000617948 ATG3Q9NT62 314 aa13.48□□□□□ -0.25
DEF8-229ENST00000617948 GOLIM4O00461 696 aa13.48□□□□□ -0.25
DEF8-229ENST00000617948 ST18O60284 1047 aa13.48□□□□□ -0.25
DEF8-229ENST00000617948 TRAPPC3LQ5T215 181 aa13.48□□□□□ -0.25
DEF8-229ENST00000617948 IFIT1P09914 478 aaKnown RBP13.47□□□□□ -0.25
DEF8-229ENST00000617948 CHMP5Q9NZZ3 219 aa13.47□□□□□ -0.25
DEF8-229ENST00000617948 HOXB7P09629 217 aa13.47□□□□□ -0.25
DEF8-229ENST00000617948 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
DEF8-229ENST00000617948 DCTPP1Q9H773 170 aa13.47□□□□□ -0.25
DEF8-229ENST00000617948 BABAM1Q9NWV8 329 aa13.47□□□□□ -0.25
DEF8-229ENST00000617948 NEURL1BA8MQ27 555 aa13.47□□□□□ -0.25
DEF8-229ENST00000617948 C6orf229H3BNL8 230 aa13.47□□□□□ -0.25
DEF8-229ENST00000617948 SLC4A8Q2Y0W8 1093 aa13.47□□□□□ -0.25
DEF8-229ENST00000617948 RRP12Q5JTH9 1297 aaKnown RBP13.47□□□□□ -0.25
DEF8-229ENST00000617948 BEND3Q5T5X7 828 aa13.46□□□□□ -0.25
DEF8-229ENST00000617948 KRT27Q7Z3Y8 459 aa13.46□□□□□ -0.25
DEF8-229ENST00000617948 GJD4Q96KN9 370 aaPredicted RBP13.46□□□□□ -0.25
DEF8-229ENST00000617948 TBC1D2Q9BYX2 928 aa13.46□□□□□ -0.25
DEF8-229ENST00000617948 LRP2BPQ9P2M1 347 aa13.46□□□□□ -0.25
DEF8-229ENST00000617948 TFCP2Q12800 502 aa13.46□□□□□ -0.25
DEF8-229ENST00000617948 SAMD1Q6SPF0 538 aaPredicted RBP13.46□□□□□ -0.25
DEF8-229ENST00000617948 FAM196AQ6ZSG2 479 aa13.46□□□□□ -0.25
DEF8-229ENST00000617948 UTP14AQ9BVJ6 771 aaKnown RBP13.46□□□□□ -0.25
DEF8-229ENST00000617948 RXRBP28702 533 aa13.46□□□□□ -0.26
DEF8-229ENST00000617948 PDE1AP54750 535 aa13.46□□□□□ -0.26
DEF8-229ENST00000617948 RPGRQ92834 1020 aaKnown RBP13.46□□□□□ -0.26
DEF8-229ENST00000617948 TAF5LO75529 589 aa13.45□□□□□ -0.26
DEF8-229ENST00000617948 SDSP20132 328 aa13.45□□□□□ -0.26
DEF8-229ENST00000617948 NLRP3Q96P20 1036 aa13.45□□□□□ -0.26
DEF8-229ENST00000617948 RAI14Q9P0K7 980 aa13.45□□□□□ -0.26
DEF8-229ENST00000617948 GBP4Q96PP9 640 aa13.45□□□□□ -0.26
DEF8-229ENST00000617948 ECHDC1Q9NTX5 307 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms