RNA–Protein interactions for RNA: ENST00000617649.4

ACACA-240, Transcript of acetyl-CoA carboxylase alpha, human

TSL 5 BASIC

Gene ACACA, Length 7,912 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-240	ENST00000617649	BAG4	O95429	457 aa	Known RBP	7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	SSB	P05455	408 aa	Known RBP eCLIP	7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	DCTN1	Q14203	1278 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	AKAP4	Q5JQC9	854 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	CRNKL1	Q9BZJ0	848 aa	Known RBP	7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	IL1RAPL2	Q9NP60	686 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	EVI5L	Q96CN4	794 aa		7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	RTCB	Q9Y3I0	505 aa	Known RBP	7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	SH2B1	Q9NRF2	756 aa	Predicted RBP	7.74	□□□□□ -1.17
ACACA-240	ENST00000617649	NEBL	O76041	1014 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	NASP	P49321	788 aa	Predicted RBP	7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	CEBPZ	Q03701	1054 aa	Known RBP	7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	IQCE	Q6IPM2	695 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	LDHAL6A	Q6ZMR3	332 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	SPATA32	Q96LK8	384 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	TSG101	Q99816	390 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	ARHGEF10	O15013	1369 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649		B4DLN1	442 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	GPT	P24298	496 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	MRPL12	P52815	198 aa	Known RBP	7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	NLRP3	Q96P20	1036 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	PYM1	Q9BRP8	204 aa	Known RBP	7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	BRPF1	P55201	1214 aa	Predicted RBP	7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	WDR78	Q5VTH9	848 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	ZNF397	Q8NF99	534 aa	Predicted RBP	7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	SHROOM2	Q13796	1616 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	RANBP6	O60518	1105 aa	Known RBP	7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	ZBTB3	Q9H5J0	574 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	SMTNL1	A8MU46	457 aa		7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	HMGN5	P82970	282 aa	Known RBP	7.73	□□□□□ -1.17
ACACA-240	ENST00000617649	EXOC6B	Q9Y2D4	811 aa		7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	LRRFIP2	Q9Y608	721 aa	Known RBP	7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	SOS1	Q07889	1333 aa	Predicted RBP	7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	CHRNA2	Q15822	529 aa		7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	TRAPPC8	Q9Y2L5	1435 aa		7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	SSRP1	Q08945	709 aa	Known RBP	7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	STXBP4	Q6ZWJ1	553 aa		7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	NUTM1	Q86Y26	1132 aa		7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	CETN2	P41208	172 aa		7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	ANKRD13D	Q6ZTN6	518 aa		7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	GCC2	Q8IWJ2	1684 aa		7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	PRAG1	Q86YV5	1406 aa		7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	LMOD1	P29536	600 aa	Predicted RBP	7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	EYA3	Q99504	573 aa		7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	BOLA2	Q9H3K6	86 aa		7.72	□□□□□ -1.17
ACACA-240	ENST00000617649	SPDYE4	A6NLX3	237 aa		7.71	□□□□□ -1.17
ACACA-240	ENST00000617649	ZFY	P08048	801 aa	Predicted RBP	7.71	□□□□□ -1.17
ACACA-240	ENST00000617649	PLCG2	P16885	1265 aa		7.71	□□□□□ -1.17
ACACA-240	ENST00000617649	HSP90AA2P	Q14568	343 aa	Predicted RBP	7.71	□□□□□ -1.17
ACACA-240	ENST00000617649	VSIG10	Q8N0Z9	540 aa		7.71	□□□□□ -1.17
ACACA-240	ENST00000617649	MRE11	P49959	708 aa		7.71	□□□□□ -1.17
ACACA-240	ENST00000617649	TPTE2	Q6XPS3	522 aa		7.71	□□□□□ -1.17
ACACA-240	ENST00000617649	JDP2	Q8WYK2	163 aa		7.71	□□□□□ -1.17
ACACA-240	ENST00000617649	UTP14A	Q9BVJ6	771 aa	Known RBP	7.71	□□□□□ -1.17
ACACA-240	ENST00000617649	CIZ1	Q9ULV3	898 aa	Predicted RBP	7.71	□□□□□ -1.17
ACACA-240	ENST00000617649	KAT14	Q9H8E8	782 aa		7.71	□□□□□ -1.18
ACACA-240	ENST00000617649	YTHDC2	Q9H6S0	1430 aa	Known RBP	7.71	□□□□□ -1.18
ACACA-240	ENST00000617649	NCKAP5L	Q9HCH0	1330 aa		7.71	□□□□□ -1.18
ACACA-240	ENST00000617649	NOM1	Q5C9Z4	860 aa	Known RBP	7.71	□□□□□ -1.18
ACACA-240	ENST00000617649	CAVIN1	Q6NZI2	390 aa	Known RBP	7.71	□□□□□ -1.18
ACACA-240	ENST00000617649	HMG20B	Q9P0W2	317 aa		7.71	□□□□□ -1.18
ACACA-240	ENST00000617649	UBE3B	Q7Z3V4	1068 aa		7.71	□□□□□ -1.18
ACACA-240	ENST00000617649	ZNF219	Q9P2Y4	722 aa	Predicted RBP	7.71	□□□□□ -1.18
ACACA-240	ENST00000617649	CCDC194	A0A1B0GVG4	234 aa		7.71	□□□□□ -1.18
ACACA-240	ENST00000617649	PPM1F	P49593	454 aa	Predicted RBP	7.71	□□□□□ -1.18
ACACA-240	ENST00000617649	SSH1	Q8WYL5	1049 aa		7.71	□□□□□ -1.18
ACACA-240	ENST00000617649	TFCP2L1	Q9NZI6	479 aa		7.71	□□□□□ -1.18
ACACA-240	ENST00000617649	RARS	P54136	660 aa	Known RBP	7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	DRC1	Q96MC2	740 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	JAKMIP3	Q5VZ66	844 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	MFSD6	Q6ZSS7	791 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	ARID3A	Q99856	593 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	THUMPD2	Q9BTF0	503 aa	Known RBP	7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	MAP3K5	Q99683	1374 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	CCDC181	Q5TID7	509 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	LRRC27	Q9C0I9	530 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	ANKRD2	Q9GZV1	360 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	DISP3	Q9P2K9	1392 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	IFIT3	O14879	490 aa	Known RBP	7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	PRPF40A	O75400	957 aa	Known RBP	7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	VPS36	Q86VN1	386 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	DCAF5	Q96JK2	942 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	MAPKBP1	O60336	1514 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	GOLGA6L10	A6NI86	522 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	AMPD3	Q01432	767 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	C8orf76	Q96K31	380 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	TSPY2	A6NKD2	308 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	CETN1	Q12798	172 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	KRT23	Q9C075	422 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	CNNM2	Q9H8M5	875 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	SEPT11	Q9NVA2	429 aa	Known RBP	7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	SAMD9	Q5K651	1589 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	STK32B	Q9NY57	414 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	TBX22	Q9Y458	520 aa		7.7	□□□□□ -1.18
ACACA-240	ENST00000617649	PIK3C2G	O75747	1445 aa		7.69	□□□□□ -1.18
ACACA-240	ENST00000617649	TNNI2	P48788	182 aa		7.69	□□□□□ -1.18
ACACA-240	ENST00000617649	SEPT7	Q16181	437 aa	Known RBP	7.69	□□□□□ -1.18
ACACA-240	ENST00000617649	TTLL5	Q6EMB2	1281 aa		7.69	□□□□□ -1.18
ACACA-240	ENST00000617649	ACSBG1	Q96GR2	724 aa		7.69	□□□□□ -1.18
ACACA-240	ENST00000617649	ECHDC1	Q9NTX5	307 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 69 ms