RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 CWF19L2Q2TBE0 894 aaKnown RBP20.52■□□□□ 0.88
SNAP47-213ENST00000617596 ZBTB40Q9NUA8 1239 aa20.52■□□□□ 0.88
SNAP47-213ENST00000617596 DEKP35659 375 aaKnown RBP20.51■□□□□ 0.87
SNAP47-213ENST00000617596 MYD88Q99836 296 aa20.51■□□□□ 0.87
SNAP47-213ENST00000617596 PCDHB15Q9Y5E8 787 aa20.51■□□□□ 0.87
SNAP47-213ENST00000617596 IL6STP40189 918 aaPredicted RBP20.51■□□□□ 0.87
SNAP47-213ENST00000617596 PROM2Q8N271 834 aa20.51■□□□□ 0.87
SNAP47-213ENST00000617596 PLBD2Q8NHP8 589 aa20.51■□□□□ 0.87
SNAP47-213ENST00000617596 SRCIN1Q9C0H9 1055 aa20.51■□□□□ 0.87
SNAP47-213ENST00000617596 TBC1D2BQ9UPU7 963 aa20.51■□□□□ 0.87
SNAP47-213ENST00000617596 MYH14Q7Z406 1995 aaKnown RBP20.5■□□□□ 0.87
SNAP47-213ENST00000617596 ATP5J2-PTCD1G3V325 749 aa20.5■□□□□ 0.87
SNAP47-213ENST00000617596 LY75O60449 1722 aa20.49■□□□□ 0.87
SNAP47-213ENST00000617596 IGKV5-2P06315 115 aa20.49■□□□□ 0.87
SNAP47-213ENST00000617596 EIF5P55010 431 aaKnown RBP20.49■□□□□ 0.87
SNAP47-213ENST00000617596 AMIGO3Q86WK7 504 aa20.49■□□□□ 0.87
SNAP47-213ENST00000617596 METTL22Q9BUU2 404 aaPredicted RBP20.49■□□□□ 0.87
SNAP47-213ENST00000617596 TXNRD1Q16881 649 aa20.48■□□□□ 0.87
SNAP47-213ENST00000617596 NPM2Q86SE8 214 aaKnown RBP20.48■□□□□ 0.87
SNAP47-213ENST00000617596 PXDNLA1KZ92 1463 aa20.48■□□□□ 0.87
SNAP47-213ENST00000617596 COL5A3P25940 1745 aaPredicted RBP20.48■□□□□ 0.87
SNAP47-213ENST00000617596 HLFQ16534 295 aa20.47■□□□□ 0.87
SNAP47-213ENST00000617596 KIF6Q6ZMV9 814 aa20.47■□□□□ 0.87
SNAP47-213ENST00000617596 DZIP3Q86Y13 1208 aaKnown RBP20.47■□□□□ 0.87
SNAP47-213ENST00000617596 USP44Q9H0E7 712 aa20.47■□□□□ 0.87
SNAP47-213ENST00000617596 CICQ96RK0 1608 aaPredicted RBP20.47■□□□□ 0.87
SNAP47-213ENST00000617596 GNPATO15228 680 aa20.47■□□□□ 0.87
SNAP47-213ENST00000617596 CNTNAP4Q9C0A0 1308 aa20.47■□□□□ 0.87
SNAP47-213ENST00000617596 ZNF831Q5JPB2 1677 aa20.46■□□□□ 0.87
SNAP47-213ENST00000617596 NEXNQ0ZGT2 675 aa20.46■□□□□ 0.87
SNAP47-213ENST00000617596 LINS1Q8NG48 757 aa20.46■□□□□ 0.87
SNAP47-213ENST00000617596 ATP10DQ9P241 1426 aa20.46■□□□□ 0.87
SNAP47-213ENST00000617596 NBPF7P0C2Y1 421 aaPredicted RBP20.45■□□□□ 0.86
SNAP47-213ENST00000617596 MAP3K15Q6ZN16 1313 aa20.45■□□□□ 0.86
SNAP47-213ENST00000617596 NEURL1BA8MQ27 555 aa20.45■□□□□ 0.86
SNAP47-213ENST00000617596 JARID2Q92833 1246 aaPredicted RBP20.45■□□□□ 0.86
SNAP47-213ENST00000617596 PLSCR1O15162 318 aa20.44■□□□□ 0.86
SNAP47-213ENST00000617596 IGHDP01880 384 aa20.44■□□□□ 0.86
SNAP47-213ENST00000617596 SLC27A3Q5K4L6 730 aa20.44■□□□□ 0.86
SNAP47-213ENST00000617596 COL15A1P39059 1388 aa20.44■□□□□ 0.86
SNAP47-213ENST00000617596 ARFGEF2Q9Y6D5 1785 aa20.43■□□□□ 0.86
SNAP47-213ENST00000617596 PHF14O94880 888 aa20.43■□□□□ 0.86
SNAP47-213ENST00000617596 RC3H1Q5TC82 1133 aaKnown RBP20.43■□□□□ 0.86
SNAP47-213ENST00000617596 RREB1Q92766 1687 aa20.43■□□□□ 0.86
SNAP47-213ENST00000617596 ALDH1L1O75891 902 aa20.43■□□□□ 0.86
SNAP47-213ENST00000617596 RPS6KA4O75676 772 aa20.42■□□□□ 0.86
SNAP47-213ENST00000617596 EN1Q05925 392 aaPredicted RBP20.42■□□□□ 0.86
SNAP47-213ENST00000617596 AK7Q96M32 723 aa20.42■□□□□ 0.86
SNAP47-213ENST00000617596 C9orf78Q9NZ63 289 aaPredicted RBP20.42■□□□□ 0.86
SNAP47-213ENST00000617596 GPTP24298 496 aa20.41■□□□□ 0.86
SNAP47-213ENST00000617596 AAMPQ13685 434 aa20.41■□□□□ 0.86
SNAP47-213ENST00000617596 GCKRQ14397 625 aa20.41■□□□□ 0.86
SNAP47-213ENST00000617596 CHMP4BQ9H444 224 aaKnown RBP20.41■□□□□ 0.86
SNAP47-213ENST00000617596 RTCBQ9Y3I0 505 aaKnown RBP20.41■□□□□ 0.86
SNAP47-213ENST00000617596 TAF1LQ8IZX4 1826 aa20.41■□□□□ 0.86
SNAP47-213ENST00000617596 C4BP0C0L5 1744 aa20.41■□□□□ 0.86
SNAP47-213ENST00000617596 NUP188Q5SRE5 1749 aa20.41■□□□□ 0.86
SNAP47-213ENST00000617596 TNS1Q9HBL0 1735 aaKnown RBP20.41■□□□□ 0.86
SNAP47-213ENST00000617596 CAMTA2O94983 1202 aa20.41■□□□□ 0.86
SNAP47-213ENST00000617596 UBTFL1P0CB47 393 aaPredicted RBP20.41■□□□□ 0.86
SNAP47-213ENST00000617596 TCIRG1Q13488 830 aa20.41■□□□□ 0.86
SNAP47-213ENST00000617596 RTL5Q5HYW3 569 aaPredicted RBP20.41■□□□□ 0.86
SNAP47-213ENST00000617596 GIGYF2Q6Y7W6 1299 aaKnown RBP20.41■□□□□ 0.86
SNAP47-213ENST00000617596 LRRFIP2Q9Y608 721 aaKnown RBP20.41■□□□□ 0.86
SNAP47-213ENST00000617596 EZH2Q15910 746 aaKnown RBP20.4■□□□□ 0.86
SNAP47-213ENST00000617596 GRM8O00222 908 aa20.39■□□□□ 0.86
SNAP47-213ENST00000617596 GNAI3P08754 354 aa20.39■□□□□ 0.86
SNAP47-213ENST00000617596 SIRT2Q8IXJ6 389 aa20.39■□□□□ 0.86
SNAP47-213ENST00000617596 SRP68Q9UHB9 627 aaKnown RBP20.39■□□□□ 0.86
SNAP47-213ENST00000617596 NOP58Q9Y2X3 529 aaKnown RBP20.39■□□□□ 0.86
SNAP47-213ENST00000617596 N4BP2Q86UW6 1770 aaPredicted RBP20.39■□□□□ 0.85
SNAP47-213ENST00000617596 GNAI2P04899 355 aa20.39■□□□□ 0.85
SNAP47-213ENST00000617596 DEFB132Q7Z7B7 95 aa20.39■□□□□ 0.85
SNAP47-213ENST00000617596 ARHGEF1Q92888 912 aaKnown RBP20.39■□□□□ 0.85
SNAP47-213ENST00000617596 ERVV-1B6SEH8 477 aa20.38■□□□□ 0.85
SNAP47-213ENST00000617596 ISCA1Q9BUE6 129 aa20.38■□□□□ 0.85
SNAP47-213ENST00000617596 A0A087WZG4 1122 aa20.37■□□□□ 0.85
SNAP47-213ENST00000617596 ZNF827Q17R98 1081 aa20.37■□□□□ 0.85
SNAP47-213ENST00000617596 CEP85Q6P2H3 762 aa20.37■□□□□ 0.85
SNAP47-213ENST00000617596 UBE3BQ7Z3V4 1068 aa20.37■□□□□ 0.85
SNAP47-213ENST00000617596 CWC25Q9NXE8 425 aaPredicted RBP20.37■□□□□ 0.85
SNAP47-213ENST00000617596 KDM2BQ8NHM5 1336 aa20.36■□□□□ 0.85
SNAP47-213ENST00000617596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.36■□□□□ 0.85
SNAP47-213ENST00000617596 USPL1Q5W0Q7 1092 aa20.36■□□□□ 0.85
SNAP47-213ENST00000617596 CAMKK2Q96RR4 588 aa20.36■□□□□ 0.85
SNAP47-213ENST00000617596 SF3B2Q13435 895 aaKnown RBP20.35■□□□□ 0.85
SNAP47-213ENST00000617596 TRAPPC3LQ5T215 181 aa20.35■□□□□ 0.85
SNAP47-213ENST00000617596 SKAP1Q86WV1 359 aa20.35■□□□□ 0.85
SNAP47-213ENST00000617596 SUCLG2Q96I99 432 aa20.35■□□□□ 0.85
SNAP47-213ENST00000617596 UBN2Q6ZU65 1347 aa20.35■□□□□ 0.85
SNAP47-213ENST00000617596 FAM177BA6PVY3 158 aa20.35■□□□□ 0.85
SNAP47-213ENST00000617596 CCDC191Q8NCU4 936 aa20.35■□□□□ 0.85
SNAP47-213ENST00000617596 BCL2L12Q9HB09 334 aa20.35■□□□□ 0.85
SNAP47-213ENST00000617596 NLRP10Q86W26 655 aa20.34■□□□□ 0.85
SNAP47-213ENST00000617596 KAZALD1Q96I82 304 aa20.34■□□□□ 0.85
SNAP47-213ENST00000617596 RWDD1Q9H446 243 aaPredicted RBP20.34■□□□□ 0.85
SNAP47-213ENST00000617596 UTYO14607 1347 aa20.34■□□□□ 0.85
SNAP47-213ENST00000617596 PNMA6EA0A0J9YXQ4 647 aa20.33■□□□□ 0.85
SNAP47-213ENST00000617596 RFC4P35249 363 aa20.33■□□□□ 0.85
SNAP47-213ENST00000617596 HSP90AB3PQ58FF7 597 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms