RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 SEPT7Q16181 437 aaKnown RBP11.86□□□□□ -0.51
CUL4A-212ENST00000617546 CNPY2Q9Y2B0 182 aa11.86□□□□□ -0.51
CUL4A-212ENST00000617546 BICRAQ9NZM4 1560 aa11.86□□□□□ -0.51
CUL4A-212ENST00000617546 GPATCH11Q8N954 259 aa11.86□□□□□ -0.51
CUL4A-212ENST00000617546 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
CUL4A-212ENST00000617546 SMC1AQ14683 1233 aaKnown RBP11.86□□□□□ -0.51
CUL4A-212ENST00000617546 USP26Q9BXU7 913 aa11.86□□□□□ -0.51
CUL4A-212ENST00000617546 SNAPC4Q5SXM2 1469 aa11.85□□□□□ -0.51
CUL4A-212ENST00000617546 GNAT3A8MTJ3 354 aa11.85□□□□□ -0.51
CUL4A-212ENST00000617546 SKIDA1Q1XH10 827 aa11.85□□□□□ -0.51
CUL4A-212ENST00000617546 HDXQ7Z353 690 aa11.85□□□□□ -0.51
CUL4A-212ENST00000617546 FAM114A1Q8IWE2 563 aa11.85□□□□□ -0.51
CUL4A-212ENST00000617546 ZNF830Q96NB3 372 aaPredicted RBP11.85□□□□□ -0.51
CUL4A-212ENST00000617546 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
CUL4A-212ENST00000617546 IMPACTQ9P2X3 320 aa11.85□□□□□ -0.51
CUL4A-212ENST00000617546 PDE1AP54750 535 aa11.85□□□□□ -0.51
CUL4A-212ENST00000617546 MAP2K1Q02750 393 aaPredicted RBP11.85□□□□□ -0.51
CUL4A-212ENST00000617546 RNF187Q5TA31 235 aaPredicted RBP11.85□□□□□ -0.51
CUL4A-212ENST00000617546 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
CUL4A-212ENST00000617546 DMTNQ08495 405 aa11.85□□□□□ -0.51
CUL4A-212ENST00000617546 CCDC102BQ68D86 513 aa11.85□□□□□ -0.51
CUL4A-212ENST00000617546 TCEAL9Q9UHQ7 104 aa11.85□□□□□ -0.51
CUL4A-212ENST00000617546 EBAG9O00559 213 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 HSPA4P34932 840 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 ANKRD24Q8TF21 1146 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 MRPS27Q92552 414 aaKnown RBP11.84□□□□□ -0.51
CUL4A-212ENST00000617546 DNAI1Q9UI46 699 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 KIF24Q5T7B8 1368 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 CAPN2P17655 700 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 UBASH3AP57075 661 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 MRPL50Q8N5N7 158 aaKnown RBP11.84□□□□□ -0.51
CUL4A-212ENST00000617546 SOS1Q07889 1333 aaPredicted RBP11.84□□□□□ -0.51
CUL4A-212ENST00000617546 MYO1BO43795 1136 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 BMP15O95972 392 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 ATP2B1P20020 1258 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 GNL3LQ9NVN8 582 aaKnown RBP11.84□□□□□ -0.51
CUL4A-212ENST00000617546 AKAP2Q9Y2D5 859 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 SHANK2Q9UPX8 1470 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 AOX1Q06278 1338 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 NLRP6P59044 892 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 NUTM2FA1L443 756 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 CCDC175P0C221 793 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 PSME1Q06323 249 aa11.84□□□□□ -0.51
CUL4A-212ENST00000617546 TTC21BQ7Z4L5 1316 aa11.83□□□□□ -0.51
CUL4A-212ENST00000617546 SEC24BO95487 1268 aa11.83□□□□□ -0.52
CUL4A-212ENST00000617546 ENOX2Q16206 610 aaKnown RBP11.83□□□□□ -0.52
CUL4A-212ENST00000617546 NUP88Q99567 741 aaPredicted RBP11.83□□□□□ -0.52
CUL4A-212ENST00000617546 PLCD4Q9BRC7 762 aa11.83□□□□□ -0.52
CUL4A-212ENST00000617546 GBP2P32456 591 aaPredicted RBP11.83□□□□□ -0.52
CUL4A-212ENST00000617546 VPS36Q86VN1 386 aa11.83□□□□□ -0.52
CUL4A-212ENST00000617546 POTEDQ86YR6 584 aa11.83□□□□□ -0.52
CUL4A-212ENST00000617546 RAD50Q92878 1312 aa11.83□□□□□ -0.52
CUL4A-212ENST00000617546 PIK3R4Q99570 1358 aa11.83□□□□□ -0.52
CUL4A-212ENST00000617546 RIOK3O14730 519 aaKnown RBP11.83□□□□□ -0.52
CUL4A-212ENST00000617546 EZRP15311 586 aaKnown RBP11.83□□□□□ -0.52
CUL4A-212ENST00000617546 MKRN1Q9UHC7 482 aaKnown RBP11.83□□□□□ -0.52
CUL4A-212ENST00000617546 PTGS1P23219 599 aa11.83□□□□□ -0.52
CUL4A-212ENST00000617546 CCDC43Q96MW1 224 aaKnown RBP11.83□□□□□ -0.52
CUL4A-212ENST00000617546 TRERF1Q96PN7 1200 aa11.83□□□□□ -0.52
CUL4A-212ENST00000617546 NEK1Q96PY6 1258 aa11.83□□□□□ -0.52
CUL4A-212ENST00000617546 CTAGE9A4FU28 777 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 PPM1EQ8WY54 764 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 RAI14Q9P0K7 980 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 LAMC3Q9Y6N6 1575 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 TTC41PQ6P2S7 1318 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 ARFGAP2Q8N6H7 521 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 LMBRD1Q9NUN5 540 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 RMND1Q9NWS8 449 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 DACT1Q9NYF0 836 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 G3V3G9 751 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 DCAF8Q5TAQ9 597 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 TSG101Q99816 390 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 TANGO6Q9C0B7 1094 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 RSPH14Q9UHP6 348 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 IFI16Q16666 785 aaKnown RBP11.82□□□□□ -0.52
CUL4A-212ENST00000617546 NSRP1Q9H0G5 558 aaKnown RBP11.82□□□□□ -0.52
CUL4A-212ENST00000617546 TAOK3Q9H2K8 898 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 SYT1P21579 422 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 LARP1Q6PKG0 1096 aaKnown RBP11.82□□□□□ -0.52
CUL4A-212ENST00000617546 UBAC1Q9BSL1 405 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 CEP126Q9P2H0 1117 aa11.82□□□□□ -0.52
CUL4A-212ENST00000617546 CYLC1P35663 651 aaPredicted RBP11.81□□□□□ -0.52
CUL4A-212ENST00000617546 KIF6Q6ZMV9 814 aa11.81□□□□□ -0.52
CUL4A-212ENST00000617546 B4GALNT4Q76KP1 1039 aa11.81□□□□□ -0.52
CUL4A-212ENST00000617546 TAF7Q15545 349 aaPredicted RBP11.81□□□□□ -0.52
CUL4A-212ENST00000617546 CCDC50Q8IVM0 306 aa11.81□□□□□ -0.52
CUL4A-212ENST00000617546 DDX12PQ92771 950 aa11.81□□□□□ -0.52
CUL4A-212ENST00000617546 IFFO1Q0D2I5 559 aa11.81□□□□□ -0.52
CUL4A-212ENST00000617546 AFAP1Q8N556 730 aa11.81□□□□□ -0.52
CUL4A-212ENST00000617546 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
CUL4A-212ENST00000617546 ZFYVE9O95405 1425 aa11.81□□□□□ -0.52
CUL4A-212ENST00000617546 TEX14Q8IWB6 1497 aa11.81□□□□□ -0.52
CUL4A-212ENST00000617546 ARHGEF11O15085 1522 aa11.81□□□□□ -0.52
CUL4A-212ENST00000617546 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
CUL4A-212ENST00000617546 KRT18P05783 430 aaKnown RBP11.8□□□□□ -0.52
CUL4A-212ENST00000617546 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
CUL4A-212ENST00000617546 TFIP11Q9UBB9 837 aaKnown RBP11.8□□□□□ -0.52
CUL4A-212ENST00000617546 TAX1BP1Q86VP1 789 aa11.8□□□□□ -0.52
CUL4A-212ENST00000617546 PLEKHM2Q8IWE5 1019 aa11.8□□□□□ -0.52
CUL4A-212ENST00000617546 ELP1O95163 1332 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms