RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	NECTIN2	Q92692	538 aa		13.74	□□□□□ -0.21
TP53-222	ENST00000617185	OVOS2	A0A0J9YW53	1432 aa		13.74	□□□□□ -0.21
TP53-222	ENST00000617185	OVOS2	Q6IE36	1432 aa		13.74	□□□□□ -0.21
TP53-222	ENST00000617185	HTATSF1	O43719	755 aa	Known RBP	13.74	□□□□□ -0.21
TP53-222	ENST00000617185	ERO1A	Q96HE7	468 aa		13.74	□□□□□ -0.21
TP53-222	ENST00000617185	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.74	□□□□□ -0.21
TP53-222	ENST00000617185	PTGS1	P23219	599 aa		13.73	□□□□□ -0.21
TP53-222	ENST00000617185	MRPL50	Q8N5N7	158 aa	Known RBP	13.73	□□□□□ -0.21
TP53-222	ENST00000617185	CWC15	Q9P013	229 aa	Known RBP	13.73	□□□□□ -0.21
TP53-222	ENST00000617185	AP5Z1	O43299	807 aa		13.73	□□□□□ -0.21
TP53-222	ENST00000617185	MTHFSD	Q2M296	383 aa	Known RBP	13.73	□□□□□ -0.21
TP53-222	ENST00000617185	KRBA2	Q6ZNG9	492 aa		13.73	□□□□□ -0.21
TP53-222	ENST00000617185	USP48	Q86UV5	1035 aa		13.73	□□□□□ -0.21
TP53-222	ENST00000617185	EYA1	Q99502	592 aa		13.73	□□□□□ -0.21
TP53-222	ENST00000617185	CEP83	Q9Y592	693 aa		13.73	□□□□□ -0.21
TP53-222	ENST00000617185	DLG5	Q8TDM6	1919 aa		13.73	□□□□□ -0.21
TP53-222	ENST00000617185	ESCO1	Q5FWF5	840 aa		13.72	□□□□□ -0.21
TP53-222	ENST00000617185	CEP135	Q66GS9	1140 aa		13.72	□□□□□ -0.21
TP53-222	ENST00000617185	NFATC2IP	Q8NCF5	419 aa		13.72	□□□□□ -0.21
TP53-222	ENST00000617185	ZNF215	Q9UL58	517 aa	Predicted RBP	13.72	□□□□□ -0.21
TP53-222	ENST00000617185	ARHGAP23	Q9P227	1491 aa		13.72	□□□□□ -0.21
TP53-222	ENST00000617185	RIMS1	Q86UR5	1692 aa	Known RBP	13.72	□□□□□ -0.21
TP53-222	ENST00000617185	PEAK1	Q9H792	1746 aa		13.72	□□□□□ -0.21
TP53-222	ENST00000617185	IPO8	O15397	1037 aa	Known RBP	13.72	□□□□□ -0.21
TP53-222	ENST00000617185	ZNF853	P0CG23	659 aa		13.72	□□□□□ -0.21
TP53-222	ENST00000617185	TPD52L1	Q16890	204 aa	Predicted RBP	13.72	□□□□□ -0.21
TP53-222	ENST00000617185	RTF1	Q92541	710 aa	Known RBP	13.72	□□□□□ -0.21
TP53-222	ENST00000617185	DIP2A	Q14689	1571 aa		13.72	□□□□□ -0.21
TP53-222	ENST00000617185	SLIT1	O75093	1534 aa		13.72	□□□□□ -0.21
TP53-222	ENST00000617185	SETD1B	Q9UPS6	1966 aa	Known RBP	13.71	□□□□□ -0.21
TP53-222	ENST00000617185	TRIM66	O15016	1216 aa		13.71	□□□□□ -0.21
TP53-222	ENST00000617185	CCDC172	P0C7W6	258 aa		13.71	□□□□□ -0.21
TP53-222	ENST00000617185	GYS2	P54840	703 aa		13.71	□□□□□ -0.21
TP53-222	ENST00000617185	TPM4	P67936	248 aa		13.71	□□□□□ -0.21
TP53-222	ENST00000617185	ELF2	Q15723	593 aa		13.71	□□□□□ -0.21
TP53-222	ENST00000617185	ANKLE2	Q86XL3	938 aa		13.71	□□□□□ -0.21
TP53-222	ENST00000617185	NEK11	Q8NG66	645 aa		13.71	□□□□□ -0.21
TP53-222	ENST00000617185	GPS2	Q13227	327 aa		13.7	□□□□□ -0.22
TP53-222	ENST00000617185	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.7	□□□□□ -0.22
TP53-222	ENST00000617185	GTF3C6	Q969F1	213 aa		13.7	□□□□□ -0.22
TP53-222	ENST00000617185	CARD10	Q9BWT7	1032 aa		13.7	□□□□□ -0.22
TP53-222	ENST00000617185	ALDH1L2	Q3SY69	923 aa		13.7	□□□□□ -0.22
TP53-222	ENST00000617185	INTS3	Q68E01	1043 aa	Known RBP	13.7	□□□□□ -0.22
TP53-222	ENST00000617185	ZNF592	Q92610	1267 aa		13.7	□□□□□ -0.22
TP53-222	ENST00000617185	GDPD2	Q9HCC8	539 aa		13.7	□□□□□ -0.22
TP53-222	ENST00000617185	JRKL	Q9Y4A0	524 aa		13.7	□□□□□ -0.22
TP53-222	ENST00000617185	SMARCA5	O60264	1052 aa	Predicted RBP	13.7	□□□□□ -0.22
TP53-222	ENST00000617185	TMEM87A	Q8NBN3	555 aa		13.7	□□□□□ -0.22
TP53-222	ENST00000617185	CCDC191	Q8NCU4	936 aa		13.7	□□□□□ -0.22
TP53-222	ENST00000617185	FUCA2	Q9BTY2	467 aa		13.7	□□□□□ -0.22
TP53-222	ENST00000617185	APBB1	O00213	710 aa		13.69	□□□□□ -0.22
TP53-222	ENST00000617185	MCM2	P49736	904 aa		13.69	□□□□□ -0.22
TP53-222	ENST00000617185	ZSCAN26	Q16670	478 aa		13.69	□□□□□ -0.22
TP53-222	ENST00000617185	CCDC186	Q7Z3E2	898 aa		13.69	□□□□□ -0.22
TP53-222	ENST00000617185	ORAI2	Q96SN7	254 aa		13.69	□□□□□ -0.22
TP53-222	ENST00000617185	ATG3	Q9NT62	314 aa		13.69	□□□□□ -0.22
TP53-222	ENST00000617185	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
TP53-222	ENST00000617185	FHOD1	Q9Y613	1164 aa		13.69	□□□□□ -0.22
TP53-222	ENST00000617185		V9GYY5	206 aa	Predicted RBP	13.69	□□□□□ -0.22
TP53-222	ENST00000617185	PTPRC	P08575	1304 aa		13.69	□□□□□ -0.22
TP53-222	ENST00000617185		A0A1B0GUL7	405 aa		13.69	□□□□□ -0.22
TP53-222	ENST00000617185	NOM1	Q5C9Z4	860 aa	Known RBP	13.69	□□□□□ -0.22
TP53-222	ENST00000617185	TMX3	Q96JJ7	454 aa		13.69	□□□□□ -0.22
TP53-222	ENST00000617185	LRRFIP2	Q9Y608	721 aa	Known RBP	13.69	□□□□□ -0.22
TP53-222	ENST00000617185	NRK	Q7Z2Y5	1582 aa		13.68	□□□□□ -0.22
TP53-222	ENST00000617185	GSPT1	P15170	499 aa	Known RBP	13.68	□□□□□ -0.22
TP53-222	ENST00000617185	SSH2	Q76I76	1423 aa		13.68	□□□□□ -0.22
TP53-222	ENST00000617185	GPATCH11	Q8N954	259 aa		13.68	□□□□□ -0.22
TP53-222	ENST00000617185	TOPAZ1	Q8N9V7	1692 aa		13.68	□□□□□ -0.22
TP53-222	ENST00000617185	H2AFX	P16104	143 aa	Predicted RBP	13.68	□□□□□ -0.22
TP53-222	ENST00000617185	SRL	Q86TD4	932 aa		13.68	□□□□□ -0.22
TP53-222	ENST00000617185	INTS4	Q96HW7	963 aa	Known RBP	13.68	□□□□□ -0.22
TP53-222	ENST00000617185	LCMT1	Q9UIC8	334 aa		13.68	□□□□□ -0.22
TP53-222	ENST00000617185	PHF8	Q9UPP1	1060 aa		13.68	□□□□□ -0.22
TP53-222	ENST00000617185	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.67	□□□□□ -0.22
TP53-222	ENST00000617185	ZBTB7B	O15156	539 aa	Predicted RBP	13.67	□□□□□ -0.22
TP53-222	ENST00000617185	SLU7	O95391	586 aa	Known RBP	13.67	□□□□□ -0.22
TP53-222	ENST00000617185	LRMP	Q12912	555 aa		13.67	□□□□□ -0.22
TP53-222	ENST00000617185	CUL4A	Q13619	759 aa		13.67	□□□□□ -0.22
TP53-222	ENST00000617185	TOMM22	Q9NS69	142 aa		13.67	□□□□□ -0.22
TP53-222	ENST00000617185	CCDC171	Q6TFL3	1326 aa		13.67	□□□□□ -0.22
TP53-222	ENST00000617185	PTCH1	Q13635	1447 aa		13.67	□□□□□ -0.22
TP53-222	ENST00000617185	PATL2	C9JE40	543 aa	Known RBP	13.67	□□□□□ -0.22
TP53-222	ENST00000617185	PNMA6A	P0CW24	399 aa	Predicted RBP	13.67	□□□□□ -0.22
TP53-222	ENST00000617185	HOXC9	P31274	260 aa		13.67	□□□□□ -0.22
TP53-222	ENST00000617185	UBE2H	P62256	183 aa		13.67	□□□□□ -0.22
TP53-222	ENST00000617185	PSME1	Q06323	249 aa		13.67	□□□□□ -0.22
TP53-222	ENST00000617185	ZSCAN25	Q6NSZ9	544 aa		13.67	□□□□□ -0.22
TP53-222	ENST00000617185	CASC1	Q6TDU7	716 aa		13.67	□□□□□ -0.22
TP53-222	ENST00000617185	TSPYL4	Q9UJ04	414 aa		13.67	□□□□□ -0.22
TP53-222	ENST00000617185	TTC21A	Q8NDW8	1320 aa		13.66	□□□□□ -0.22
TP53-222	ENST00000617185		F6X3S4	739 aa		13.66	□□□□□ -0.22
TP53-222	ENST00000617185	PLA2G4A	P47712	749 aa		13.66	□□□□□ -0.22
TP53-222	ENST00000617185	SLC4A10	Q6U841	1118 aa		13.66	□□□□□ -0.22
TP53-222	ENST00000617185	EP400NL	Q6ZTU2	488 aa		13.66	□□□□□ -0.22
TP53-222	ENST00000617185	FLT4	P35916	1363 aa		13.66	□□□□□ -0.22
TP53-222	ENST00000617185	USP31	Q70CQ4	1352 aa		13.66	□□□□□ -0.22
TP53-222	ENST00000617185	WDR33	Q9C0J8	1336 aa	Known RBP	13.66	□□□□□ -0.22
TP53-222	ENST00000617185	DEF6	Q9H4E7	631 aa		13.66	□□□□□ -0.22
TP53-222	ENST00000617185	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms