RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 ACEP12821 1306 aa18.57■□□□□ 0.56
GPN1-212ENST00000616939 KDM3BQ7LBC6 1761 aa18.57■□□□□ 0.56
GPN1-212ENST00000616939 FOXO3O43524 673 aa18.57■□□□□ 0.56
GPN1-212ENST00000616939 DNM1Q05193 864 aaKnown RBP18.57■□□□□ 0.56
GPN1-212ENST00000616939 MAP3K11Q16584 847 aa18.57■□□□□ 0.56
GPN1-212ENST00000616939 NUTM1Q86Y26 1132 aa18.57■□□□□ 0.56
GPN1-212ENST00000616939 MED1Q15648 1581 aaPredicted RBP18.57■□□□□ 0.56
GPN1-212ENST00000616939 SMTNL1A8MU46 457 aa18.56■□□□□ 0.56
GPN1-212ENST00000616939 CBX1P83916 185 aa18.56■□□□□ 0.56
GPN1-212ENST00000616939 RBM43Q6ZSC3 357 aaKnown RBP18.56■□□□□ 0.56
GPN1-212ENST00000616939 IL1RAPL2Q9NP60 686 aa18.56■□□□□ 0.56
GPN1-212ENST00000616939 NWD1Q149M9 1564 aa18.56■□□□□ 0.56
GPN1-212ENST00000616939 GLRX3O76003 335 aaKnown RBP18.56■□□□□ 0.56
GPN1-212ENST00000616939 LARGE1O95461 756 aa18.56■□□□□ 0.56
GPN1-212ENST00000616939 KRT85P78386 507 aa18.56■□□□□ 0.56
GPN1-212ENST00000616939 PPP1R42Q7Z4L9 355 aa18.56■□□□□ 0.56
GPN1-212ENST00000616939 NUP62CLQ9H1M0 184 aa18.56■□□□□ 0.56
GPN1-212ENST00000616939 PDRG1Q9NUG6 133 aa18.56■□□□□ 0.56
GPN1-212ENST00000616939 CASTP20810 708 aaKnown RBP18.55■□□□□ 0.56
GPN1-212ENST00000616939 HDGFP51858 240 aaKnown RBP18.55■□□□□ 0.56
GPN1-212ENST00000616939 CCDC83Q8IWF9 413 aa18.55■□□□□ 0.56
GPN1-212ENST00000616939 CYP46A1Q9Y6A2 500 aa18.55■□□□□ 0.56
GPN1-212ENST00000616939 MRVI1Q9Y6F6 885 aa18.55■□□□□ 0.56
GPN1-212ENST00000616939 PIK3C2AO00443 1686 aa18.54■□□□□ 0.56
GPN1-212ENST00000616939 UBR1Q8IWV7 1749 aa18.54■□□□□ 0.56
GPN1-212ENST00000616939 SURF6O75683 361 aaKnown RBP18.54■□□□□ 0.56
GPN1-212ENST00000616939 PDCP20941 246 aa18.54■□□□□ 0.56
GPN1-212ENST00000616939 TYRO3Q06418 890 aa18.54■□□□□ 0.56
GPN1-212ENST00000616939 TDRD7Q8NHU6 1098 aaKnown RBP18.54■□□□□ 0.56
GPN1-212ENST00000616939 ALDH8A1Q9H2A2 487 aaPredicted RBP18.54■□□□□ 0.56
GPN1-212ENST00000616939 DDX19AQ9NUU7 478 aaKnown RBP18.54■□□□□ 0.56
GPN1-212ENST00000616939 ROBO2Q9HCK4 1378 aa18.54■□□□□ 0.56
GPN1-212ENST00000616939 MYH15Q9Y2K3 1946 aa18.54■□□□□ 0.56
GPN1-212ENST00000616939 CDC25BP30305 580 aa18.53■□□□□ 0.56
GPN1-212ENST00000616939 ST3GAL1Q11201 340 aa18.53■□□□□ 0.56
GPN1-212ENST00000616939 OGFRQ9NZT2 677 aa18.53■□□□□ 0.56
GPN1-212ENST00000616939 ZHX1Q9UKY1 873 aaPredicted RBP18.53■□□□□ 0.56
GPN1-212ENST00000616939 MARF1Q9Y4F3 1742 aaKnown RBP18.53■□□□□ 0.56
GPN1-212ENST00000616939 GNAT3A8MTJ3 354 aa18.53■□□□□ 0.56
GPN1-212ENST00000616939 CAVIN2O95810 425 aa18.53■□□□□ 0.56
GPN1-212ENST00000616939 PLA2G4DQ86XP0 818 aa18.53■□□□□ 0.56
GPN1-212ENST00000616939 CHMP4AQ9BY43 222 aa18.53■□□□□ 0.56
GPN1-212ENST00000616939 DIP2BQ9P265 1576 aa18.52■□□□□ 0.56
GPN1-212ENST00000616939 TTC6Q86TZ1 520 aa18.52■□□□□ 0.56
GPN1-212ENST00000616939 SNRKQ9NRH2 765 aa18.52■□□□□ 0.56
GPN1-212ENST00000616939 PTGS1P23219 599 aa18.51■□□□□ 0.55
GPN1-212ENST00000616939 MTX1Q13505 466 aa18.51■□□□□ 0.55
GPN1-212ENST00000616939 JAKMIP1Q96N16 626 aaKnown RBP18.51■□□□□ 0.55
GPN1-212ENST00000616939 PAXBP1Q9Y5B6 917 aa18.51■□□□□ 0.55
GPN1-212ENST00000616939 HOXB7P09629 217 aa18.51■□□□□ 0.55
GPN1-212ENST00000616939 ZNF75DP51815 510 aa18.51■□□□□ 0.55
GPN1-212ENST00000616939 GABPB1Q06547 395 aaPredicted RBP18.51■□□□□ 0.55
GPN1-212ENST00000616939 NCBP1Q09161 790 aaKnown RBP18.51■□□□□ 0.55
GPN1-212ENST00000616939 SPC24Q8NBT2 197 aa18.51■□□□□ 0.55
GPN1-212ENST00000616939 EYA1Q99502 592 aa18.51■□□□□ 0.55
GPN1-212ENST00000616939 SCAND2PQ9GZW5 306 aaPredicted RBP18.51■□□□□ 0.55
GPN1-212ENST00000616939 ADAMTS13Q76LX8 1427 aa18.5■□□□□ 0.55
GPN1-212ENST00000616939 NPHP3Q7Z494 1330 aa18.5■□□□□ 0.55
GPN1-212ENST00000616939 PLCB2Q00722 1185 aa18.5■□□□□ 0.55
GPN1-212ENST00000616939 NECTIN1Q15223 517 aa18.5■□□□□ 0.55
GPN1-212ENST00000616939 TAF7Q15545 349 aaPredicted RBP18.5■□□□□ 0.55
GPN1-212ENST00000616939 CLSTN2Q9H4D0 955 aa18.5■□□□□ 0.55
GPN1-212ENST00000616939 CGNQ9P2M7 1197 aaKnown RBP18.5■□□□□ 0.55
GPN1-212ENST00000616939 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
GPN1-212ENST00000616939 HIP1O00291 1037 aa18.49■□□□□ 0.55
GPN1-212ENST00000616939 MAP4K4O95819 1239 aaPredicted RBP18.49■□□□□ 0.55
GPN1-212ENST00000616939 TAF3Q5VWG9 929 aa18.49■□□□□ 0.55
GPN1-212ENST00000616939 CWC27Q6UX04 472 aaKnown RBP18.49■□□□□ 0.55
GPN1-212ENST00000616939 CBX8Q9HC52 389 aa18.49■□□□□ 0.55
GPN1-212ENST00000616939 VPS37CA5D8V6 355 aaPredicted RBP18.49■□□□□ 0.55
GPN1-212ENST00000616939 SRGAP3O43295 1099 aa18.49■□□□□ 0.55
GPN1-212ENST00000616939 ANKRD1Q15327 319 aa18.49■□□□□ 0.55
GPN1-212ENST00000616939 ME3Q16798 604 aa18.49■□□□□ 0.55
GPN1-212ENST00000616939 FAM177BA6PVY3 158 aa18.48■□□□□ 0.55
GPN1-212ENST00000616939 GIGYF1O75420 1035 aaPredicted RBP18.48■□□□□ 0.55
GPN1-212ENST00000616939 ZKSCAN1P17029 563 aaPredicted RBP18.48■□□□□ 0.55
GPN1-212ENST00000616939 PSMA5P28066 241 aa18.48■□□□□ 0.55
GPN1-212ENST00000616939 PTH1RQ03431 593 aa18.48■□□□□ 0.55
GPN1-212ENST00000616939 GPATCH3Q96I76 525 aa18.48■□□□□ 0.55
GPN1-212ENST00000616939 SPG7Q9UQ90 795 aa18.48■□□□□ 0.55
GPN1-212ENST00000616939 JCADQ9P266 1359 aa18.48■□□□□ 0.55
GPN1-212ENST00000616939 NEMFO60524 1076 aa18.47■□□□□ 0.55
GPN1-212ENST00000616939 LIG1P18858 919 aa18.47■□□□□ 0.55
GPN1-212ENST00000616939 U2AF2P26368 475 aaKnown RBP eCLIP18.47■□□□□ 0.55
GPN1-212ENST00000616939 ADCK5Q3MIX3 580 aa18.47■□□□□ 0.55
GPN1-212ENST00000616939 LARP1BQ659C4 914 aaKnown RBP18.47■□□□□ 0.55
GPN1-212ENST00000616939 PRPF40BQ6NWY9 871 aaKnown RBP18.47■□□□□ 0.55
GPN1-212ENST00000616939 CCDC186Q7Z3E2 898 aa18.47■□□□□ 0.55
GPN1-212ENST00000616939 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
GPN1-212ENST00000616939 EVI5LQ96CN4 794 aa18.47■□□□□ 0.55
GPN1-212ENST00000616939 TNMDQ9H2S6 317 aa18.47■□□□□ 0.55
GPN1-212ENST00000616939 CTNNA3Q9UI47 895 aa18.47■□□□□ 0.55
GPN1-212ENST00000616939 CPA1P15085 419 aa18.46■□□□□ 0.55
GPN1-212ENST00000616939 HDGFL1Q5TGJ6 251 aa18.46■□□□□ 0.55
GPN1-212ENST00000616939 ZSCAN25Q6NSZ9 544 aa18.46■□□□□ 0.55
GPN1-212ENST00000616939 SARM1Q6SZW1 724 aa18.46■□□□□ 0.55
GPN1-212ENST00000616939 ECHDC1Q9NTX5 307 aa18.46■□□□□ 0.55
GPN1-212ENST00000616939 LMO7Q8WWI1 1683 aa18.46■□□□□ 0.55
GPN1-212ENST00000616939 ANO6Q4KMQ2 910 aa18.46■□□□□ 0.55
GPN1-212ENST00000616939 BEND3Q5T5X7 828 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms