RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 ZKSCAN5Q9Y2L8 839 aa18.66■□□□□ 0.58
NOP56-220ENST00000616692 CD163L1Q9NR16 1453 aa18.66■□□□□ 0.58
NOP56-220ENST00000616692 DDX11L8A8MPP1 907 aa18.66■□□□□ 0.58
NOP56-220ENST00000616692 IL2RBP14784 551 aa18.65■□□□□ 0.58
NOP56-220ENST00000616692 HMGB2P26583 209 aaKnown RBP18.65■□□□□ 0.58
NOP56-220ENST00000616692 HDGFL2Q7Z4V5 671 aaPredicted RBP18.65■□□□□ 0.58
NOP56-220ENST00000616692 COL24A1Q17RW2 1714 aa18.65■□□□□ 0.58
NOP56-220ENST00000616692 SGIP1Q9BQI5 828 aa18.65■□□□□ 0.58
NOP56-220ENST00000616692 DNAJC21Q5F1R6 531 aaKnown RBP18.64■□□□□ 0.57
NOP56-220ENST00000616692 SKAP1Q86WV1 359 aa18.64■□□□□ 0.57
NOP56-220ENST00000616692 TSC1Q92574 1164 aa18.64■□□□□ 0.57
NOP56-220ENST00000616692 JARID2Q92833 1246 aaPredicted RBP18.64■□□□□ 0.57
NOP56-220ENST00000616692 SLC16A10Q8TF71 515 aa18.64■□□□□ 0.57
NOP56-220ENST00000616692 TERF2Q15554 542 aa18.63■□□□□ 0.57
NOP56-220ENST00000616692 TRERF1Q96PN7 1200 aa18.63■□□□□ 0.57
NOP56-220ENST00000616692 LTN1O94822 1766 aa18.63■□□□□ 0.57
NOP56-220ENST00000616692 SLC27A3Q5K4L6 730 aa18.62■□□□□ 0.57
NOP56-220ENST00000616692 PTF1AQ7RTS3 328 aa18.62■□□□□ 0.57
NOP56-220ENST00000616692 MNS1Q8NEH6 495 aa18.62■□□□□ 0.57
NOP56-220ENST00000616692 PNISRQ8TF01 805 aaKnown RBP18.62■□□□□ 0.57
NOP56-220ENST00000616692 MED4Q9NPJ6 270 aa18.62■□□□□ 0.57
NOP56-220ENST00000616692 CCDC189A1A4V9 331 aa18.62■□□□□ 0.57
NOP56-220ENST00000616692 RASSF4Q9H2L5 321 aa18.62■□□□□ 0.57
NOP56-220ENST00000616692 MRS2Q9HD23 443 aa18.62■□□□□ 0.57
NOP56-220ENST00000616692 TMX1Q9H3N1 280 aa18.61■□□□□ 0.57
NOP56-220ENST00000616692 MRVI1Q9Y6F6 885 aa18.61■□□□□ 0.57
NOP56-220ENST00000616692 RBM25P49756 843 aaKnown RBP18.61■□□□□ 0.57
NOP56-220ENST00000616692 ITFG2Q969R8 447 aa18.6■□□□□ 0.57
NOP56-220ENST00000616692 BTAF1O14981 1849 aa18.6■□□□□ 0.57
NOP56-220ENST00000616692 RAD51AP2Q09MP3 1159 aa18.59■□□□□ 0.57
NOP56-220ENST00000616692 SUFUQ9UMX1 484 aa18.59■□□□□ 0.57
NOP56-220ENST00000616692 SRCAPQ6ZRS2 3230 aa18.59■□□□□ 0.57
NOP56-220ENST00000616692 ZBTB7AO95365 584 aa18.59■□□□□ 0.57
NOP56-220ENST00000616692 TNNT1P13805 278 aa18.59■□□□□ 0.57
NOP56-220ENST00000616692 IP6K1Q92551 441 aa18.59■□□□□ 0.57
NOP56-220ENST00000616692 BCL2L12Q9HB09 334 aa18.59■□□□□ 0.57
NOP56-220ENST00000616692 NLRP2Q9NX02 1062 aa18.59■□□□□ 0.57
NOP56-220ENST00000616692 CCDC96Q2M329 555 aa18.58■□□□□ 0.57
NOP56-220ENST00000616692 ANKRD24Q8TF21 1146 aa18.58■□□□□ 0.57
NOP56-220ENST00000616692 SYT17Q9BSW7 474 aa18.58■□□□□ 0.57
NOP56-220ENST00000616692 RAD50Q92878 1312 aa18.58■□□□□ 0.56
NOP56-220ENST00000616692 VIRMAQ69YN4 1812 aaKnown RBP18.57■□□□□ 0.56
NOP56-220ENST00000616692 LRCH2Q5VUJ6 765 aa18.57■□□□□ 0.56
NOP56-220ENST00000616692 MPHOSPH10O00566 681 aaKnown RBP18.57■□□□□ 0.56
NOP56-220ENST00000616692 TMTC2Q8N394 836 aa18.57■□□□□ 0.56
NOP56-220ENST00000616692 ERICH4A6NGS2 130 aa18.56■□□□□ 0.56
NOP56-220ENST00000616692 CXorf56Q9H5V9 222 aa18.56■□□□□ 0.56
NOP56-220ENST00000616692 NME9Q86XW9 330 aa18.56■□□□□ 0.56
NOP56-220ENST00000616692 CREBRFQ8IUR6 639 aa18.56■□□□□ 0.56
NOP56-220ENST00000616692 ANKRD7Q92527 254 aa18.56■□□□□ 0.56
NOP56-220ENST00000616692 FHDC1Q9C0D6 1143 aaPredicted RBP18.56■□□□□ 0.56
NOP56-220ENST00000616692 ATF5Q9Y2D1 282 aaPredicted RBP18.56■□□□□ 0.56
NOP56-220ENST00000616692 RTL1A6NKG5 1358 aa18.55■□□□□ 0.56
NOP56-220ENST00000616692 PPP1R12AO14974 1030 aaPredicted RBP18.55■□□□□ 0.56
NOP56-220ENST00000616692 AKT1S1Q96B36 256 aa18.55■□□□□ 0.56
NOP56-220ENST00000616692 CARD11Q9BXL7 1154 aa18.55■□□□□ 0.56
NOP56-220ENST00000616692 TOMM22Q9NS69 142 aa18.55■□□□□ 0.56
NOP56-220ENST00000616692 CHD4Q14839 1912 aa18.54■□□□□ 0.56
NOP56-220ENST00000616692 CGNL1Q0VF96 1302 aa18.54■□□□□ 0.56
NOP56-220ENST00000616692 CALRP27797 417 aaKnown RBP18.54■□□□□ 0.56
NOP56-220ENST00000616692 PDGFDQ9GZP0 370 aaPredicted RBP18.54■□□□□ 0.56
NOP56-220ENST00000616692 BIRC2Q13490 618 aa18.54■□□□□ 0.56
NOP56-220ENST00000616692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.54■□□□□ 0.56
NOP56-220ENST00000616692 NOL10Q9BSC4 688 aaKnown RBP18.54■□□□□ 0.56
NOP56-220ENST00000616692 A0A1W2PP64 1363 aa18.53■□□□□ 0.56
NOP56-220ENST00000616692 ANKRD36BQ8N2N9 1353 aa18.53■□□□□ 0.56
NOP56-220ENST00000616692 MTA1Q13330 715 aa18.53■□□□□ 0.56
NOP56-220ENST00000616692 CCDC27Q2M243 656 aa18.53■□□□□ 0.56
NOP56-220ENST00000616692 PDLIM2Q96JY6 352 aa18.53■□□□□ 0.56
NOP56-220ENST00000616692 HSP90AB1P08238 724 aaKnown RBP18.52■□□□□ 0.56
NOP56-220ENST00000616692 LY75O60449 1722 aa18.52■□□□□ 0.55
NOP56-220ENST00000616692 KLHL33A6NCF5 533 aa18.51■□□□□ 0.55
NOP56-220ENST00000616692 ZNF784Q8NCA9 323 aaPredicted RBP18.51■□□□□ 0.55
NOP56-220ENST00000616692 TNPO1Q92973 898 aaKnown RBP18.51■□□□□ 0.55
NOP56-220ENST00000616692 ZC3H12AQ5D1E8 599 aaKnown RBP18.51■□□□□ 0.55
NOP56-220ENST00000616692 CHMP5Q9NZZ3 219 aa18.51■□□□□ 0.55
NOP56-220ENST00000616692 IPO8O15397 1037 aaKnown RBP18.5■□□□□ 0.55
NOP56-220ENST00000616692 POLD1P28340 1107 aa18.5■□□□□ 0.55
NOP56-220ENST00000616692 CASQ1P31415 396 aa18.5■□□□□ 0.55
NOP56-220ENST00000616692 ANKRD23Q86SG2 305 aa18.5■□□□□ 0.55
NOP56-220ENST00000616692 ACSBG1Q96GR2 724 aa18.5■□□□□ 0.55
NOP56-220ENST00000616692 SLC12A5Q9H2X9 1139 aa18.5■□□□□ 0.55
NOP56-220ENST00000616692 KIF24Q5T7B8 1368 aa18.5■□□□□ 0.55
NOP56-220ENST00000616692 CT47B1P0C2W7 299 aaPredicted RBP18.49■□□□□ 0.55
NOP56-220ENST00000616692 JMYQ8N9B5 988 aa18.49■□□□□ 0.55
NOP56-220ENST00000616692 KIF3CO14782 793 aa18.49■□□□□ 0.55
NOP56-220ENST00000616692 HNRNPH2P55795 449 aaKnown RBP18.49■□□□□ 0.55
NOP56-220ENST00000616692 ZNF827Q17R98 1081 aa18.49■□□□□ 0.55
NOP56-220ENST00000616692 SKOR2Q2VWA4 1001 aaPredicted RBP18.49■□□□□ 0.55
NOP56-220ENST00000616692 DNAJC14Q6Y2X3 702 aaPredicted RBP18.49■□□□□ 0.55
NOP56-220ENST00000616692 COG3Q96JB2 828 aa18.48■□□□□ 0.55
NOP56-220ENST00000616692 CCDC39Q9UFE4 941 aa18.48■□□□□ 0.55
NOP56-220ENST00000616692 KIAA2012Q0VF49 1180 aa18.47■□□□□ 0.55
NOP56-220ENST00000616692 C11orf91Q3C1V1 193 aa18.47■□□□□ 0.55
NOP56-220ENST00000616692 RINLQ6ZS11 566 aa18.47■□□□□ 0.55
NOP56-220ENST00000616692 TSHZ1Q6ZSZ6 1077 aa18.47■□□□□ 0.55
NOP56-220ENST00000616692 PRKRIP1Q9H875 184 aaPredicted RBP18.47■□□□□ 0.55
NOP56-220ENST00000616692 LRRC4BQ9NT99 713 aa18.47■□□□□ 0.55
NOP56-220ENST00000616692 FAM177BA6PVY3 158 aa18.47■□□□□ 0.55
NOP56-220ENST00000616692 ARMCX6Q7L4S7 300 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms