RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 FLIIQ13045 1269 aa11.28□□□□□ -0.6
MCM3-207ENST00000616552 PTPN21Q16825 1174 aa11.28□□□□□ -0.6
MCM3-207ENST00000616552 USP16Q9Y5T5 823 aa11.28□□□□□ -0.6
MCM3-207ENST00000616552 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.28□□□□□ -0.6
MCM3-207ENST00000616552 TUBGCP6Q96RT7 1819 aa11.27□□□□□ -0.6
MCM3-207ENST00000616552 KIDINS220Q9ULH0 1771 aa11.27□□□□□ -0.6
MCM3-207ENST00000616552 PTPRMP28827 1452 aa11.27□□□□□ -0.6
MCM3-207ENST00000616552 CCDC192P0DO97 292 aa11.27□□□□□ -0.61
MCM3-207ENST00000616552 ELF2Q15723 593 aa11.27□□□□□ -0.61
MCM3-207ENST00000616552 PPP1R42Q7Z4L9 355 aa11.27□□□□□ -0.61
MCM3-207ENST00000616552 TPCN1Q9ULQ1 816 aa11.27□□□□□ -0.61
MCM3-207ENST00000616552 MAP2P11137 1827 aaKnown RBP11.27□□□□□ -0.61
MCM3-207ENST00000616552 KIF20BQ96Q89 1820 aa11.27□□□□□ -0.61
MCM3-207ENST00000616552 NBPF7P0C2Y1 421 aaPredicted RBP11.27□□□□□ -0.61
MCM3-207ENST00000616552 LMOD3Q0VAK6 560 aa11.27□□□□□ -0.61
MCM3-207ENST00000616552 LTV1Q96GA3 475 aaPredicted RBP11.27□□□□□ -0.61
MCM3-207ENST00000616552 RPGRIP1LQ68CZ1 1315 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 SGSM2O43147 1006 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 EIF2S2P20042 333 aaKnown RBP11.26□□□□□ -0.61
MCM3-207ENST00000616552 LARP1BQ659C4 914 aaKnown RBP11.26□□□□□ -0.61
MCM3-207ENST00000616552 TMEM87AQ8NBN3 555 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 USP44Q9H0E7 712 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 NUP62CLQ9H1M0 184 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 CCDC9Q9Y3X0 531 aaKnown RBP11.26□□□□□ -0.61
MCM3-207ENST00000616552 KIAA0232Q92628 1395 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 MLH3Q9UHC1 1453 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 ANAPC15P60006 121 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 CCDC112Q8NEF3 446 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 PI4K2BQ8TCG2 481 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 FAM200AQ8TCP9 573 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 GTF3C6Q969F1 213 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 TNMDQ9H2S6 317 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 PDRG1Q9NUG6 133 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 OGFRQ9NZT2 677 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 CLIP2Q9UDT6 1046 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 ATP8B2P98198 1209 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 FBXO38Q6PIJ6 1188 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 KIF18AQ8NI77 898 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
MCM3-207ENST00000616552 NDUFB9Q9Y6M9 179 aa11.26□□□□□ -0.61
MCM3-207ENST00000616552 SRGAP3O43295 1099 aa11.25□□□□□ -0.61
MCM3-207ENST00000616552 IRX5P78411 483 aaPredicted RBP11.25□□□□□ -0.61
MCM3-207ENST00000616552 MAP3K11Q16584 847 aa11.25□□□□□ -0.61
MCM3-207ENST00000616552 PA2G4Q9UQ80 394 aaKnown RBP11.25□□□□□ -0.61
MCM3-207ENST00000616552 PTPRCP08575 1304 aa11.25□□□□□ -0.61
MCM3-207ENST00000616552 RAD50Q92878 1312 aa11.25□□□□□ -0.61
MCM3-207ENST00000616552 DLG5Q8TDM6 1919 aa11.25□□□□□ -0.61
MCM3-207ENST00000616552 ZFYVE9O95405 1425 aa11.25□□□□□ -0.61
MCM3-207ENST00000616552 IFIT2P09913 472 aaKnown RBP11.25□□□□□ -0.61
MCM3-207ENST00000616552 LARP1Q6PKG0 1096 aaKnown RBP11.25□□□□□ -0.61
MCM3-207ENST00000616552 CERS3Q8IU89 383 aa11.25□□□□□ -0.61
MCM3-207ENST00000616552 IL17RAQ96F46 866 aa11.25□□□□□ -0.61
MCM3-207ENST00000616552 FAM227BQ96M60 508 aa11.25□□□□□ -0.61
MCM3-207ENST00000616552 DDX41Q9UJV9 622 aaKnown RBP11.25□□□□□ -0.61
MCM3-207ENST00000616552 JAK2O60674 1132 aa11.24□□□□□ -0.61
MCM3-207ENST00000616552 ZNF75DP51815 510 aa11.24□□□□□ -0.61
MCM3-207ENST00000616552 C11orf57Q6ZUT1 292 aaPredicted RBP11.24□□□□□ -0.61
MCM3-207ENST00000616552 ZNF165P49910 485 aa11.24□□□□□ -0.61
MCM3-207ENST00000616552 RBM6P78332 1123 aaKnown RBP11.24□□□□□ -0.61
MCM3-207ENST00000616552 GORABQ5T7V8 394 aa11.24□□□□□ -0.61
MCM3-207ENST00000616552 NUDT16Q96DE0 195 aaKnown RBP11.24□□□□□ -0.61
MCM3-207ENST00000616552 LRRC2Q9BYS8 371 aa11.24□□□□□ -0.61
MCM3-207ENST00000616552 EPC1Q9H2F5 836 aa11.24□□□□□ -0.61
MCM3-207ENST00000616552 NEXMIFQ5QGS0 1516 aa11.24□□□□□ -0.61
MCM3-207ENST00000616552 DIP2CQ9Y2E4 1556 aa11.24□□□□□ -0.61
MCM3-207ENST00000616552 CEP135Q66GS9 1140 aa11.24□□□□□ -0.61
MCM3-207ENST00000616552 RHPN1Q8TCX5 695 aa11.24□□□□□ -0.61
MCM3-207ENST00000616552 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.24□□□□□ -0.61
MCM3-207ENST00000616552 MAP3K19Q56UN5 1328 aa11.23□□□□□ -0.61
MCM3-207ENST00000616552 CCT4P50991 539 aaKnown RBP11.23□□□□□ -0.61
MCM3-207ENST00000616552 TERF2Q15554 542 aa11.23□□□□□ -0.61
MCM3-207ENST00000616552 BICD2Q8TD16 824 aa11.23□□□□□ -0.61
MCM3-207ENST00000616552 EDC3Q96F86 508 aaKnown RBP11.23□□□□□ -0.61
MCM3-207ENST00000616552 PGBD1Q96JS3 809 aa11.23□□□□□ -0.61
MCM3-207ENST00000616552 STK31Q9BXU1 1019 aa11.23□□□□□ -0.61
MCM3-207ENST00000616552 ZNF446Q9NWS9 450 aa11.23□□□□□ -0.61
MCM3-207ENST00000616552 NAP1L2Q9ULW6 460 aaPredicted RBP11.23□□□□□ -0.61
MCM3-207ENST00000616552 CPS1P31327 1500 aa11.23□□□□□ -0.61
MCM3-207ENST00000616552 SIGLEC1Q9BZZ2 1709 aa11.23□□□□□ -0.61
MCM3-207ENST00000616552 GOLGA6L4A6NEF3 574 aa11.23□□□□□ -0.61
MCM3-207ENST00000616552 GOLGA6L6A8MZA4 724 aa11.23□□□□□ -0.61
MCM3-207ENST00000616552 UBTFL1P0CB47 393 aaPredicted RBP11.23□□□□□ -0.61
MCM3-207ENST00000616552 OS9Q13438 667 aaPredicted RBP11.23□□□□□ -0.61
MCM3-207ENST00000616552 SMTNL1A8MU46 457 aa11.22□□□□□ -0.61
MCM3-207ENST00000616552 PDE4CQ08493 712 aa11.22□□□□□ -0.61
MCM3-207ENST00000616552 ERCC6LQ2NKX8 1250 aa11.22□□□□□ -0.61
MCM3-207ENST00000616552 SPATA32Q96LK8 384 aa11.22□□□□□ -0.61
MCM3-207ENST00000616552 TMX1Q9H3N1 280 aa11.22□□□□□ -0.61
MCM3-207ENST00000616552 RAB11FIP3O75154 756 aa11.22□□□□□ -0.61
MCM3-207ENST00000616552 C14orf37Q86TY3 774 aa11.22□□□□□ -0.61
MCM3-207ENST00000616552 USHBP1Q8N6Y0 703 aa11.22□□□□□ -0.61
MCM3-207ENST00000616552 STAP2Q9UGK3 403 aa11.22□□□□□ -0.61
MCM3-207ENST00000616552 SKILP12757 684 aa11.21□□□□□ -0.62
MCM3-207ENST00000616552 ERBB3P21860 1342 aa11.21□□□□□ -0.62
MCM3-207ENST00000616552 PLA2G4DQ86XP0 818 aa11.2□□□□□ -0.62
MCM3-207ENST00000616552 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
MCM3-207ENST00000616552 FMNL2Q96PY5 1086 aa11.2□□□□□ -0.62
MCM3-207ENST00000616552 FEZ1Q99689 392 aa11.2□□□□□ -0.62
MCM3-207ENST00000616552 N4BP2Q86UW6 1770 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms