RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 SLFN14P0C7P3 912 aa15.91■□□□□ 0.14
PCDHA11-202ENST00000616325 TNNT3P45378 269 aaPredicted RBP15.91■□□□□ 0.14
PCDHA11-202ENST00000616325 CUL4AQ13619 759 aa15.91■□□□□ 0.14
PCDHA11-202ENST00000616325 USP44Q9H0E7 712 aa15.91■□□□□ 0.14
PCDHA11-202ENST00000616325 KRT222Q8N1A0 295 aa15.91■□□□□ 0.14
PCDHA11-202ENST00000616325 KNDC1Q76NI1 1749 aa15.91■□□□□ 0.14
PCDHA11-202ENST00000616325 PI4KAP2A4QPH2 592 aa15.91■□□□□ 0.14
PCDHA11-202ENST00000616325 CEBPZQ03701 1054 aaKnown RBP15.91■□□□□ 0.14
PCDHA11-202ENST00000616325 PI4KAP1Q8N8J0 262 aa15.91■□□□□ 0.14
PCDHA11-202ENST00000616325 ZFP91Q96JP5 570 aaPredicted RBP15.91■□□□□ 0.14
PCDHA11-202ENST00000616325 TPM3P06753 285 aa15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 RHPN1Q8TCX5 695 aa15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 INTS4Q96HW7 963 aaKnown RBP15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 TRIM34Q9BYJ4 488 aa15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 GNAT3A8MTJ3 354 aa15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 GORABQ5T7V8 394 aa15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 GTF3C6Q969F1 213 aa15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 TERF2Q15554 542 aa15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 ANO6Q4KMQ2 910 aa15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 CEP135Q66GS9 1140 aa15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 ABTB2Q8N961 1025 aa15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 C9orf78Q9NZ63 289 aaPredicted RBP15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 DDX41Q9UJV9 622 aaKnown RBP15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 ZNF215Q9UL58 517 aaPredicted RBP15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 ATP6V1DQ9Y5K8 247 aa15.9■□□□□ 0.14
PCDHA11-202ENST00000616325 SMTNL1A8MU46 457 aa15.89■□□□□ 0.13
PCDHA11-202ENST00000616325 GJB2P29033 226 aa15.89■□□□□ 0.13
PCDHA11-202ENST00000616325 CHPF2Q9P2E5 772 aa15.89■□□□□ 0.13
PCDHA11-202ENST00000616325 SOS1Q07889 1333 aaPredicted RBP15.89■□□□□ 0.13
PCDHA11-202ENST00000616325 TCHHQ07283 1943 aa15.89■□□□□ 0.13
PCDHA11-202ENST00000616325 POLR3GO15318 223 aaPredicted RBP15.89■□□□□ 0.13
PCDHA11-202ENST00000616325 CTIFO43310 598 aaKnown RBP15.89■□□□□ 0.13
PCDHA11-202ENST00000616325 KCNQ3O43525 872 aa15.89■□□□□ 0.13
PCDHA11-202ENST00000616325 ELF2Q15723 593 aa15.89■□□□□ 0.13
PCDHA11-202ENST00000616325 F13A1P00488 732 aa15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 ARID5BQ14865 1188 aa15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 ADCK5Q3MIX3 580 aa15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 CNTROBQ8N137 903 aa15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 TNMDQ9H2S6 317 aa15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 CLIP2Q9UDT6 1046 aa15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 SNX14Q9Y5W7 946 aa15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 GABPB1Q06547 395 aaPredicted RBP15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 MAP3K11Q16584 847 aa15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 KIF18AQ8NI77 898 aa15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 NUP62CLQ9H1M0 184 aa15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 CCDC8Q9H0W5 538 aaPredicted RBP15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 CDK12Q9NYV4 1490 aaPredicted RBP15.88■□□□□ 0.13
PCDHA11-202ENST00000616325 IL17REQ8NFR9 667 aa15.87■□□□□ 0.13
PCDHA11-202ENST00000616325 IPO4Q8TEX9 1081 aaKnown RBP15.87■□□□□ 0.13
PCDHA11-202ENST00000616325 TYRO3Q06418 890 aa15.87■□□□□ 0.13
PCDHA11-202ENST00000616325 IFIT2P09913 472 aaKnown RBP15.87■□□□□ 0.13
PCDHA11-202ENST00000616325 PTH1RQ03431 593 aa15.87■□□□□ 0.13
PCDHA11-202ENST00000616325 MPRIPQ6WCQ1 1025 aa15.87■□□□□ 0.13
PCDHA11-202ENST00000616325 RUFY3Q7L099 469 aa15.87■□□□□ 0.13
PCDHA11-202ENST00000616325 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.87■□□□□ 0.13
PCDHA11-202ENST00000616325 NDUFB9Q9Y6M9 179 aa15.87■□□□□ 0.13
PCDHA11-202ENST00000616325 LIG1P18858 919 aa15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 KMT5BQ4FZB7 885 aa15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 FAM200AQ8TCP9 573 aa15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 DACT1Q9NYF0 836 aa15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 PTPN14Q15678 1187 aa15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 ZSCAN25Q6NSZ9 544 aa15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 BICD2Q8TD16 824 aa15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 CACTINQ8WUQ7 758 aaKnown RBP15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 DNAJC25Q9H1X3 360 aa15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 LGR6Q9HBX8 967 aa15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 PDRG1Q9NUG6 133 aa15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 ROBO2Q9HCK4 1378 aa15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 ATP7BP35670 1465 aa15.86■□□□□ 0.13
PCDHA11-202ENST00000616325 CWF19L2Q2TBE0 894 aaKnown RBP15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 KLHDC4Q8TBB5 520 aa15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 OSBPL3Q9H4L5 887 aa15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 LIMCH1Q9UPQ0 1083 aa15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 CPSF1Q10570 1443 aaKnown RBP15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 USP27XA6NNY8 438 aa15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 GOLGA6L19H0YKK7 550 aa15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 TEFQ10587 303 aa15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 COL9A3Q14050 684 aaPredicted RBP15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 PAXIP1Q6ZW49 1069 aaPredicted RBP15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 AACSQ86V21 672 aa15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 BOLA2Q9H3K6 86 aa15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 CBX8Q9HC52 389 aa15.85■□□□□ 0.13
PCDHA11-202ENST00000616325 ARHGAP31Q2M1Z3 1444 aa15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 A0A087WWV3 80 aa15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 HSPA4P34932 840 aa15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 HDGFP51858 240 aaKnown RBP15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 CLASRPQ8N2M8 674 aaKnown RBP15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 AATKQ6ZMQ8 1374 aa15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 PIP4K2AP48426 406 aaPredicted RBP15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 ZNF165P49910 485 aa15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 LARP1BQ659C4 914 aaKnown RBP15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 DIP2CQ9Y2E4 1556 aa15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 DDX11Q96FC9 970 aa15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 NOL10Q9BSC4 688 aaKnown RBP15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 TMX1Q9H3N1 280 aa15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 PAXBP1Q9Y5B6 917 aa15.84■□□□□ 0.13
PCDHA11-202ENST00000616325 KIAA0232Q92628 1395 aa15.83■□□□□ 0.13
PCDHA11-202ENST00000616325 SGSM2O43147 1006 aa15.83■□□□□ 0.13
PCDHA11-202ENST00000616325 FBXO38Q6PIJ6 1188 aa15.83■□□□□ 0.13
PCDHA11-202ENST00000616325 FAM227BQ96M60 508 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms