RNA–Protein interactions for RNA: ENST00000616289.1

PDLIM2-219, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-219ENST00000616289 DICER1Q9UPY3 1922 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-219ENST00000616289 GLTPD2A6NH11 291 aa14.24□□□□□ -0.13
PDLIM2-219ENST00000616289 C21orf2O43822 256 aa14.24□□□□□ -0.13
PDLIM2-219ENST00000616289 SNRPA1P09661 255 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-219ENST00000616289 PDZRN3Q9UPQ7 1066 aa14.24□□□□□ -0.13
PDLIM2-219ENST00000616289 SLX4Q8IY92 1834 aa14.24□□□□□ -0.13
PDLIM2-219ENST00000616289 NPHP1O15259 732 aa14.23□□□□□ -0.13
PDLIM2-219ENST00000616289 ST5P78524 1137 aa14.23□□□□□ -0.13
PDLIM2-219ENST00000616289 NBPF26B4DH59 902 aa14.22□□□□□ -0.13
PDLIM2-219ENST00000616289 HTATSF1O43719 755 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-219ENST00000616289 NBPF10Q6P3W6 841 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-219ENST00000616289 NBPF15Q8N660 670 aa14.22□□□□□ -0.13
PDLIM2-219ENST00000616289 SRGNP10124 158 aa14.21□□□□□ -0.13
PDLIM2-219ENST00000616289 STYK1Q6J9G0 422 aa14.21□□□□□ -0.13
PDLIM2-219ENST00000616289 PRPF40BQ6NWY9 871 aaKnown RBP14.21□□□□□ -0.13
PDLIM2-219ENST00000616289 CLEC4GQ6UXB4 293 aa14.21□□□□□ -0.13
PDLIM2-219ENST00000616289 SMC1BQ8NDV3 1235 aa14.21□□□□□ -0.13
PDLIM2-219ENST00000616289 ZNF652Q9Y2D9 606 aa14.21□□□□□ -0.13
PDLIM2-219ENST00000616289 LTBP3Q9NS15 1303 aa14.2□□□□□ -0.14
PDLIM2-219ENST00000616289 VEGFAP15692 232 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-219ENST00000616289 TAF7Q15545 349 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-219ENST00000616289 NBPF5PQ86XG9 351 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-219ENST00000616289 CNKSR1Q969H4 720 aa14.2□□□□□ -0.14
PDLIM2-219ENST00000616289 KLRG1Q96E93 195 aa14.2□□□□□ -0.14
PDLIM2-219ENST00000616289 MIS18AQ9NYP9 233 aa14.2□□□□□ -0.14
PDLIM2-219ENST00000616289 POTECB2RU33 542 aa14.19□□□□□ -0.14
PDLIM2-219ENST00000616289 ERFEQ4G0M1 354 aa14.19□□□□□ -0.14
PDLIM2-219ENST00000616289 MASTLQ96GX5 879 aa14.19□□□□□ -0.14
PDLIM2-219ENST00000616289 TAOK3Q9H2K8 898 aa14.19□□□□□ -0.14
PDLIM2-219ENST00000616289 HLFQ16534 295 aa14.18□□□□□ -0.14
PDLIM2-219ENST00000616289 PLEKHF1Q96S99 279 aa14.18□□□□□ -0.14
PDLIM2-219ENST00000616289 NIP7Q9Y221 180 aaKnown RBP eCLIP14.18□□□□□ -0.14
PDLIM2-219ENST00000616289 RGL2O15211 777 aa14.17□□□□□ -0.14
PDLIM2-219ENST00000616289 DPY19L2Q6NUT2 758 aa14.17□□□□□ -0.14
PDLIM2-219ENST00000616289 KLRG2A4D1S0 409 aaPredicted RBP14.16□□□□□ -0.14
PDLIM2-219ENST00000616289 FAM177BA6PVY3 158 aa14.16□□□□□ -0.14
PDLIM2-219ENST00000616289 NEFMP07197 916 aa14.16□□□□□ -0.14
PDLIM2-219ENST00000616289 NPR1P16066 1061 aa14.16□□□□□ -0.14
PDLIM2-219ENST00000616289 NFE2L2Q16236 605 aa14.16□□□□□ -0.14
PDLIM2-219ENST00000616289 SOGA3Q5TF21 947 aa14.16□□□□□ -0.14
PDLIM2-219ENST00000616289 JMYQ8N9B5 988 aa14.16□□□□□ -0.14
PDLIM2-219ENST00000616289 C7orf43Q8WVR3 580 aa14.16□□□□□ -0.14
PDLIM2-219ENST00000616289 THUMPD2Q9BTF0 503 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-219ENST00000616289 NUP98P52948 1817 aa14.15□□□□□ -0.14
PDLIM2-219ENST00000616289 ABCC12Q96J65 1359 aa14.15□□□□□ -0.14
PDLIM2-219ENST00000616289 CCDC93Q567U6 631 aa14.15□□□□□ -0.14
PDLIM2-219ENST00000616289 TPTE2Q6XPS3 522 aa14.15□□□□□ -0.14
PDLIM2-219ENST00000616289 PNISRQ8TF01 805 aaKnown RBP14.15□□□□□ -0.14
PDLIM2-219ENST00000616289 DDNO94850 711 aaPredicted RBP14.14□□□□□ -0.15
PDLIM2-219ENST00000616289 EIF4A1P60842 406 aaKnown RBP14.14□□□□□ -0.15
PDLIM2-219ENST00000616289 OLFM4Q6UX06 510 aa14.14□□□□□ -0.15
PDLIM2-219ENST00000616289 NGEFQ8N5V2 710 aa14.14□□□□□ -0.15
PDLIM2-219ENST00000616289 SNED1Q8TER0 1413 aa14.13□□□□□ -0.15
PDLIM2-219ENST00000616289 MAP3K15Q6ZN16 1313 aa14.13□□□□□ -0.15
PDLIM2-219ENST00000616289 MAPK8IP3Q9UPT6 1336 aa14.13□□□□□ -0.15
PDLIM2-219ENST00000616289 POTEIP0CG38 1075 aa14.12□□□□□ -0.15
PDLIM2-219ENST00000616289 POTEJP0CG39 1038 aa14.12□□□□□ -0.15
PDLIM2-219ENST00000616289 MYL6BP14649 208 aa14.12□□□□□ -0.15
PDLIM2-219ENST00000616289 FKBP4Q02790 459 aaKnown RBP eCLIP14.12□□□□□ -0.15
PDLIM2-219ENST00000616289 TTLL7Q6ZT98 887 aa14.12□□□□□ -0.15
PDLIM2-219ENST00000616289 RRP7AQ9Y3A4 280 aaKnown RBP14.12□□□□□ -0.15
PDLIM2-219ENST00000616289 UBN2Q6ZU65 1347 aa14.12□□□□□ -0.15
PDLIM2-219ENST00000616289 SCN4AP35499 1836 aa14.11□□□□□ -0.15
PDLIM2-219ENST00000616289 ERVV-1B6SEH8 477 aa14.11□□□□□ -0.15
PDLIM2-219ENST00000616289 GTF2E1P29083 439 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-219ENST00000616289 RIC1Q4ADV7 1423 aa14.11□□□□□ -0.15
PDLIM2-219ENST00000616289 KIF6Q6ZMV9 814 aa14.11□□□□□ -0.15
PDLIM2-219ENST00000616289 NUTM1Q86Y26 1132 aa14.11□□□□□ -0.15
PDLIM2-219ENST00000616289 ZBTB3Q9H5J0 574 aa14.11□□□□□ -0.15
PDLIM2-219ENST00000616289 ZNF277Q9NRM2 450 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-219ENST00000616289 ZNF541Q9H0D2 1346 aa14.11□□□□□ -0.15
PDLIM2-219ENST00000616289 IBTKQ9P2D0 1353 aaPredicted RBP14.1□□□□□ -0.15
PDLIM2-219ENST00000616289 CRY2Q49AN0 593 aa14.1□□□□□ -0.15
PDLIM2-219ENST00000616289 NYXQ9GZU5 481 aa14.1□□□□□ -0.15
PDLIM2-219ENST00000616289 PNNQ9H307 717 aaKnown RBP14.1□□□□□ -0.15
PDLIM2-219ENST00000616289 GPTP24298 496 aa14.09□□□□□ -0.15
PDLIM2-219ENST00000616289 CHADLQ6NUI6 762 aa14.09□□□□□ -0.15
PDLIM2-219ENST00000616289 L3MBTL3Q96JM7 780 aaPredicted RBP14.09□□□□□ -0.15
PDLIM2-219ENST00000616289 TSPYL4Q9UJ04 414 aa14.09□□□□□ -0.15
PDLIM2-219ENST00000616289 ADAMTSL1Q8N6G6 1762 aa14.09□□□□□ -0.15
PDLIM2-219ENST00000616289 COL4A5P29400 1685 aa14.08□□□□□ -0.16
PDLIM2-219ENST00000616289 IQCA1LA6NCM1 817 aa14.08□□□□□ -0.16
PDLIM2-219ENST00000616289 ALDH1B1P30837 517 aa14.08□□□□□ -0.16
PDLIM2-219ENST00000616289 RTKN2Q8IZC4 609 aa14.08□□□□□ -0.16
PDLIM2-219ENST00000616289 ERBB4Q15303 1308 aa14.08□□□□□ -0.16
PDLIM2-219ENST00000616289 NTSR2O95665 410 aa14.07□□□□□ -0.16
PDLIM2-219ENST00000616289 IARSP41252 1262 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-219ENST00000616289 COL13A1Q5TAT6 717 aaPredicted RBP14.07□□□□□ -0.16
PDLIM2-219ENST00000616289 SUSD4Q5VX71 490 aa14.07□□□□□ -0.16
PDLIM2-219ENST00000616289 LRP10Q7Z4F1 713 aa14.07□□□□□ -0.16
PDLIM2-219ENST00000616289 SLC51AQ86UW1 340 aa14.07□□□□□ -0.16
PDLIM2-219ENST00000616289 TAF1DQ9H5J8 278 aaPredicted RBP14.07□□□□□ -0.16
PDLIM2-219ENST00000616289 ANKRD36CQ5JPF3 1778 aa14.06□□□□□ -0.16
PDLIM2-219ENST00000616289 RIPK4P57078 832 aa14.06□□□□□ -0.16
PDLIM2-219ENST00000616289 PDIA6Q15084 440 aa14.06□□□□□ -0.16
PDLIM2-219ENST00000616289 GIGYF2Q6Y7W6 1299 aaKnown RBP14.06□□□□□ -0.16
PDLIM2-219ENST00000616289 LDHDQ86WU2 507 aa14.06□□□□□ -0.16
PDLIM2-219ENST00000616289 ZNF34Q8IZ26 560 aa14.06□□□□□ -0.16
PDLIM2-219ENST00000616289 SYNE4Q8N205 404 aa14.06□□□□□ -0.16
PDLIM2-219ENST00000616289 RPGRQ92834 1020 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms