RNA–Protein interactions for RNA: ENST00000616078.1

LINC01879-202, Transcript of long intergenic non-protein coding RNA 1879, humanhuman

Gene LINC01879, Length 1,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01879-202ENST00000616078 CCDC88AQ3V6T2 1871 aa17.23■□□□□ 0.35
LINC01879-202ENST00000616078 NBPF26B4DH59 902 aa17.23■□□□□ 0.35
LINC01879-202ENST00000616078 SRGNP10124 158 aa17.23■□□□□ 0.35
LINC01879-202ENST00000616078 NBPF10Q6P3W6 841 aaKnown RBP17.23■□□□□ 0.35
LINC01879-202ENST00000616078 NBPF15Q8N660 670 aa17.23■□□□□ 0.35
LINC01879-202ENST00000616078 TIAM2Q8IVF5 1701 aa17.23■□□□□ 0.35
LINC01879-202ENST00000616078 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
LINC01879-202ENST00000616078 C21orf2O43822 256 aa17.22■□□□□ 0.35
LINC01879-202ENST00000616078 NBPF5PQ86XG9 351 aaPredicted RBP17.22■□□□□ 0.35
LINC01879-202ENST00000616078 DNAJC5GQ8N7S2 189 aa17.22■□□□□ 0.35
LINC01879-202ENST00000616078 MASTLQ96GX5 879 aa17.22■□□□□ 0.35
LINC01879-202ENST00000616078 PLEKHF1Q96S99 279 aa17.22■□□□□ 0.35
LINC01879-202ENST00000616078 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
LINC01879-202ENST00000616078 LTBP3Q9NS15 1303 aa17.22■□□□□ 0.35
LINC01879-202ENST00000616078 DLG5Q8TDM6 1919 aa17.22■□□□□ 0.35
LINC01879-202ENST00000616078 WDR90Q96KV7 1748 aa17.21■□□□□ 0.35
LINC01879-202ENST00000616078 VEGFAP15692 232 aaPredicted RBP17.21■□□□□ 0.35
LINC01879-202ENST00000616078 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
LINC01879-202ENST00000616078 SOGA3Q5TF21 947 aa17.21■□□□□ 0.35
LINC01879-202ENST00000616078 LAMB4A4D0S4 1761 aa17.21■□□□□ 0.34
LINC01879-202ENST00000616078 ARFGEF2Q9Y6D5 1785 aa17.21■□□□□ 0.34
LINC01879-202ENST00000616078 SMC1BQ8NDV3 1235 aa17.2■□□□□ 0.34
LINC01879-202ENST00000616078 DICER1Q9UPY3 1922 aaKnown RBP17.2■□□□□ 0.34
LINC01879-202ENST00000616078 KLRG2A4D1S0 409 aaPredicted RBP17.19■□□□□ 0.34
LINC01879-202ENST00000616078 NFE2L2Q16236 605 aa17.19■□□□□ 0.34
LINC01879-202ENST00000616078 DPY19L2Q6NUT2 758 aa17.19■□□□□ 0.34
LINC01879-202ENST00000616078 PRPF40BQ6NWY9 871 aaKnown RBP17.19■□□□□ 0.34
LINC01879-202ENST00000616078 TPTE2Q6XPS3 522 aa17.19■□□□□ 0.34
LINC01879-202ENST00000616078 KDM3BQ7LBC6 1761 aa17.19■□□□□ 0.34
LINC01879-202ENST00000616078 SLX4Q8IY92 1834 aa17.19■□□□□ 0.34
LINC01879-202ENST00000616078 TAOK3Q9H2K8 898 aa17.19■□□□□ 0.34
LINC01879-202ENST00000616078 MIS18AQ9NYP9 233 aa17.19■□□□□ 0.34
LINC01879-202ENST00000616078 NIP7Q9Y221 180 aaKnown RBP eCLIP17.19■□□□□ 0.34
LINC01879-202ENST00000616078 ZNF219Q9P2Y4 722 aaPredicted RBP17.18■□□□□ 0.34
LINC01879-202ENST00000616078 NPR1P16066 1061 aa17.18■□□□□ 0.34
LINC01879-202ENST00000616078 ERFEQ4G0M1 354 aa17.18■□□□□ 0.34
LINC01879-202ENST00000616078 IFFO2Q5TF58 517 aa17.18■□□□□ 0.34
LINC01879-202ENST00000616078 MAPK8IP3Q9UPT6 1336 aa17.17■□□□□ 0.34
LINC01879-202ENST00000616078 EIF4A1P60842 406 aaKnown RBP17.17■□□□□ 0.34
LINC01879-202ENST00000616078 ERVV-1B6SEH8 477 aa17.16■□□□□ 0.34
LINC01879-202ENST00000616078 C7orf43Q8WVR3 580 aa17.16■□□□□ 0.34
LINC01879-202ENST00000616078 CACNA1SQ13698 1873 aa17.16■□□□□ 0.34
LINC01879-202ENST00000616078 RALBP1Q15311 655 aa17.15■□□□□ 0.34
LINC01879-202ENST00000616078 HLFQ16534 295 aa17.15■□□□□ 0.34
LINC01879-202ENST00000616078 KLRG1Q96E93 195 aa17.15■□□□□ 0.34
LINC01879-202ENST00000616078 POTECB2RU33 542 aa17.14■□□□□ 0.33
LINC01879-202ENST00000616078 CCDC93Q567U6 631 aa17.14■□□□□ 0.33
LINC01879-202ENST00000616078 THUMPD2Q9BTF0 503 aaKnown RBP17.14■□□□□ 0.33
LINC01879-202ENST00000616078 ERBB4Q15303 1308 aa17.13■□□□□ 0.33
LINC01879-202ENST00000616078 MAP3K15Q6ZN16 1313 aa17.13■□□□□ 0.33
LINC01879-202ENST00000616078 NYXQ9GZU5 481 aa17.13■□□□□ 0.33
LINC01879-202ENST00000616078 GTF2E1P29083 439 aaPredicted RBP17.12■□□□□ 0.33
LINC01879-202ENST00000616078 ALDH1B1P30837 517 aa17.12■□□□□ 0.33
LINC01879-202ENST00000616078 HTRA3P83110 453 aa17.12■□□□□ 0.33
LINC01879-202ENST00000616078 DDX10Q13206 875 aaKnown RBP17.12■□□□□ 0.33
LINC01879-202ENST00000616078 KIF6Q6ZMV9 814 aa17.12■□□□□ 0.33
LINC01879-202ENST00000616078 JMYQ8N9B5 988 aa17.12■□□□□ 0.33
LINC01879-202ENST00000616078 NUP98P52948 1817 aa17.12■□□□□ 0.33
LINC01879-202ENST00000616078 FAM177BA6PVY3 158 aa17.12■□□□□ 0.33
LINC01879-202ENST00000616078 NGEFQ8N5V2 710 aa17.12■□□□□ 0.33
LINC01879-202ENST00000616078 RRP7AQ9Y3A4 280 aaKnown RBP17.12■□□□□ 0.33
LINC01879-202ENST00000616078 IBTKQ9P2D0 1353 aaPredicted RBP17.11■□□□□ 0.33
LINC01879-202ENST00000616078 FKBP4Q02790 459 aaKnown RBP eCLIP17.11■□□□□ 0.33
LINC01879-202ENST00000616078 RTKN2Q8IZC4 609 aa17.11■□□□□ 0.33
LINC01879-202ENST00000616078 BABAM1Q9NWV8 329 aa17.11■□□□□ 0.33
LINC01879-202ENST00000616078 RIC1Q4ADV7 1423 aa17.1■□□□□ 0.33
LINC01879-202ENST00000616078 RIPK4P57078 832 aa17.1■□□□□ 0.33
LINC01879-202ENST00000616078 CRY2Q49AN0 593 aa17.1■□□□□ 0.33
LINC01879-202ENST00000616078 TTLL7Q6ZT98 887 aa17.1■□□□□ 0.33
LINC01879-202ENST00000616078 TSPYL4Q9UJ04 414 aa17.1■□□□□ 0.33
LINC01879-202ENST00000616078 DDNO94850 711 aaPredicted RBP17.09■□□□□ 0.33
LINC01879-202ENST00000616078 MYL6BP14649 208 aa17.09■□□□□ 0.33
LINC01879-202ENST00000616078 LMOD3Q0VAK6 560 aa17.09■□□□□ 0.33
LINC01879-202ENST00000616078 ABCC12Q96J65 1359 aa17.08■□□□□ 0.32
LINC01879-202ENST00000616078 L3MBTL3Q96JM7 780 aaPredicted RBP17.08■□□□□ 0.32
LINC01879-202ENST00000616078 IQCA1LA6NCM1 817 aa17.07■□□□□ 0.32
LINC01879-202ENST00000616078 GIGYF2Q6Y7W6 1299 aaKnown RBP17.07■□□□□ 0.32
LINC01879-202ENST00000616078 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
LINC01879-202ENST00000616078 ZNF34Q8IZ26 560 aa17.07■□□□□ 0.32
LINC01879-202ENST00000616078 ZBTB3Q9H5J0 574 aa17.07■□□□□ 0.32
LINC01879-202ENST00000616078 UBN2Q6ZU65 1347 aa17.07■□□□□ 0.32
LINC01879-202ENST00000616078 TMPOP42166 694 aaKnown RBP17.06■□□□□ 0.32
LINC01879-202ENST00000616078 CC2D2BQ6DHV5 1058 aa17.06■□□□□ 0.32
LINC01879-202ENST00000616078 CHADLQ6NUI6 762 aa17.06■□□□□ 0.32
LINC01879-202ENST00000616078 ZNF277Q9NRM2 450 aaPredicted RBP17.06■□□□□ 0.32
LINC01879-202ENST00000616078 SCN4AP35499 1836 aa17.06■□□□□ 0.32
LINC01879-202ENST00000616078 MYBBP1AQ9BQG0 1328 aaKnown RBP17.06■□□□□ 0.32
LINC01879-202ENST00000616078 GPTP24298 496 aa17.05■□□□□ 0.32
LINC01879-202ENST00000616078 HOXA10P31260 410 aaPredicted RBP17.05■□□□□ 0.32
LINC01879-202ENST00000616078 OLFM4Q6UX06 510 aa17.05■□□□□ 0.32
LINC01879-202ENST00000616078 LRP10Q7Z4F1 713 aa17.05■□□□□ 0.32
LINC01879-202ENST00000616078 PSMD1Q99460 953 aa17.05■□□□□ 0.32
LINC01879-202ENST00000616078 SNED1Q8TER0 1413 aa17.05■□□□□ 0.32
LINC01879-202ENST00000616078 PDIA6Q15084 440 aa17.05■□□□□ 0.32
LINC01879-202ENST00000616078 GRIPAP1Q4V328 841 aa17.05■□□□□ 0.32
LINC01879-202ENST00000616078 PARP10Q53GL7 1025 aa17.05■□□□□ 0.32
LINC01879-202ENST00000616078 SUSD4Q5VX71 490 aa17.05■□□□□ 0.32
LINC01879-202ENST00000616078 RPGRQ92834 1020 aaKnown RBP17.05■□□□□ 0.32
LINC01879-202ENST00000616078 NTSR2O95665 410 aa17.04■□□□□ 0.32
LINC01879-202ENST00000616078 IARSP41252 1262 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms