RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 MSANTD4Q8NCY6 345 aa14.52□□□□□ -0.09
TCF4-248ENST00000616053 TTC12Q9H892 705 aaPredicted RBP14.52□□□□□ -0.09
TCF4-248ENST00000616053 TRAF1Q13077 416 aa14.51□□□□□ -0.09
TCF4-248ENST00000616053 ACRBPQ8NEB7 543 aa14.51□□□□□ -0.09
TCF4-248ENST00000616053 PSPC1Q8WXF1 523 aaKnown RBP14.51□□□□□ -0.09
TCF4-248ENST00000616053 CLIP2Q9UDT6 1046 aa14.51□□□□□ -0.09
TCF4-248ENST00000616053 F8W031 263 aaPredicted RBP14.51□□□□□ -0.09
TCF4-248ENST00000616053 GIPC1O14908 333 aa14.51□□□□□ -0.09
TCF4-248ENST00000616053 GJC1P36383 396 aa14.51□□□□□ -0.09
TCF4-248ENST00000616053 AMPD3Q01432 767 aa14.51□□□□□ -0.09
TCF4-248ENST00000616053 CFAP100Q494V2 611 aa14.51□□□□□ -0.09
TCF4-248ENST00000616053 PAIP2Q9BPZ3 127 aaKnown RBP14.51□□□□□ -0.09
TCF4-248ENST00000616053 CCDC172P0C7W6 258 aa14.51□□□□□ -0.09
TCF4-248ENST00000616053 HAUS2Q9NVX0 235 aa14.51□□□□□ -0.09
TCF4-248ENST00000616053 FCHSD2O94868 740 aa14.51□□□□□ -0.09
TCF4-248ENST00000616053 LARP1BQ659C4 914 aaKnown RBP14.51□□□□□ -0.09
TCF4-248ENST00000616053 CATIPQ7Z7H3 387 aa14.51□□□□□ -0.09
TCF4-248ENST00000616053 ATRIPQ8WXE1 791 aa14.51□□□□□ -0.09
TCF4-248ENST00000616053 CCDC6Q16204 474 aa14.5□□□□□ -0.09
TCF4-248ENST00000616053 BLOC1S2Q6QNY1 142 aa14.5□□□□□ -0.09
TCF4-248ENST00000616053 M0QZ92 97 aa14.5□□□□□ -0.09
TCF4-248ENST00000616053 MCM2P49736 904 aa14.5□□□□□ -0.09
TCF4-248ENST00000616053 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.5□□□□□ -0.09
TCF4-248ENST00000616053 CCDC114Q96M63 670 aa14.5□□□□□ -0.09
TCF4-248ENST00000616053 UPF3BQ9BZI7 483 aaKnown RBP14.5□□□□□ -0.09
TCF4-248ENST00000616053 TCP11L1Q9NUJ3 509 aa14.5□□□□□ -0.09
TCF4-248ENST00000616053 TRIM6Q9C030 488 aaPredicted RBP14.5□□□□□ -0.09
TCF4-248ENST00000616053 MYBBP1AQ9BQG0 1328 aaKnown RBP14.5□□□□□ -0.09
TCF4-248ENST00000616053 TBC1D31Q96DN5 1066 aa14.5□□□□□ -0.09
TCF4-248ENST00000616053 PDS5BQ9NTI5 1447 aa14.5□□□□□ -0.09
TCF4-248ENST00000616053 ESYT2A0FGR8 921 aa14.5□□□□□ -0.09
TCF4-248ENST00000616053 KRT85P78386 507 aa14.5□□□□□ -0.09
TCF4-248ENST00000616053 MRVI1Q9Y6F6 885 aa14.5□□□□□ -0.09
TCF4-248ENST00000616053 MTIF2P46199 727 aaKnown RBP14.5□□□□□ -0.09
TCF4-248ENST00000616053 ERMNQ8TAM6 284 aa14.5□□□□□ -0.09
TCF4-248ENST00000616053 KRT13P13646 458 aa14.49□□□□□ -0.09
TCF4-248ENST00000616053 NUP62CLQ9H1M0 184 aa14.49□□□□□ -0.09
TCF4-248ENST00000616053 MAP9Q49MG5 647 aa14.49□□□□□ -0.09
TCF4-248ENST00000616053 EAPPQ56P03 285 aaPredicted RBP14.49□□□□□ -0.09
TCF4-248ENST00000616053 EEF2P13639 858 aaKnown RBP14.49□□□□□ -0.09
TCF4-248ENST00000616053 GSTA5Q7RTV2 222 aa14.49□□□□□ -0.09
TCF4-248ENST00000616053 GOLGA8AA7E2F4 631 aa14.49□□□□□ -0.09
TCF4-248ENST00000616053 GOLGA8BA8MQT2 603 aa14.49□□□□□ -0.09
TCF4-248ENST00000616053 SSFA2P28290 1259 aa14.49□□□□□ -0.09
TCF4-248ENST00000616053 SPC25Q9HBM1 224 aa14.49□□□□□ -0.09
TCF4-248ENST00000616053 IFIT5Q13325 482 aaKnown RBP14.49□□□□□ -0.09
TCF4-248ENST00000616053 SPECC1LQ69YQ0 1117 aa14.49□□□□□ -0.09
TCF4-248ENST00000616053 CCDC77Q9BR77 488 aa14.49□□□□□ -0.09
TCF4-248ENST00000616053 RAB3GAP2Q9H2M9 1393 aa14.49□□□□□ -0.09
TCF4-248ENST00000616053 PARP3Q9Y6F1 533 aa14.49□□□□□ -0.09
TCF4-248ENST00000616053 TACC3Q9Y6A5 838 aa14.48□□□□□ -0.09
TCF4-248ENST00000616053 ARHGEF6Q15052 776 aa14.48□□□□□ -0.09
TCF4-248ENST00000616053 NAA15Q9BXJ9 866 aaKnown RBP14.48□□□□□ -0.09
TCF4-248ENST00000616053 GINS2Q9Y248 185 aa14.48□□□□□ -0.09
TCF4-248ENST00000616053 CCDC7Q96M83 1385 aa14.48□□□□□ -0.09
TCF4-248ENST00000616053 KIAA0753Q2KHM9 967 aa14.48□□□□□ -0.09
TCF4-248ENST00000616053 SRGAP3O43295 1099 aa14.48□□□□□ -0.09
TCF4-248ENST00000616053 PDE4BQ07343 736 aa14.48□□□□□ -0.09
TCF4-248ENST00000616053 KAT14Q9H8E8 782 aa14.48□□□□□ -0.09
TCF4-248ENST00000616053 KIF5BP33176 963 aa14.48□□□□□ -0.09
TCF4-248ENST00000616053 SP4Q02446 784 aa14.48□□□□□ -0.09
TCF4-248ENST00000616053 CFAP157Q5JU67 520 aa14.48□□□□□ -0.09
TCF4-248ENST00000616053 CDC5LQ99459 802 aaKnown RBP14.48□□□□□ -0.09
TCF4-248ENST00000616053 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 NUP88Q99567 741 aaPredicted RBP14.47□□□□□ -0.09
TCF4-248ENST00000616053 MAK16Q9BXY0 300 aaKnown RBP14.47□□□□□ -0.09
TCF4-248ENST00000616053 SPDYE16A6NNV3 312 aaPredicted RBP14.47□□□□□ -0.09
TCF4-248ENST00000616053 SPDYE2Q495Y8 402 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 RNF41Q9H4P4 317 aaPredicted RBP14.47□□□□□ -0.09
TCF4-248ENST00000616053 SLC12A7Q9Y666 1083 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 TSPY2A6NKD2 308 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 MBD3O95983 291 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 SKIV2LQ15477 1246 aaKnown RBP14.47□□□□□ -0.09
TCF4-248ENST00000616053 NBPF6Q5VWK0 638 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 MSL1Q68DK7 614 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 CAVIN1Q6NZI2 390 aaKnown RBP14.47□□□□□ -0.09
TCF4-248ENST00000616053 NBPF5PQ86XG9 351 aaPredicted RBP14.47□□□□□ -0.09
TCF4-248ENST00000616053 NBPF4Q96M43 638 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 TNNI2P48788 182 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 PLCB3Q01970 1234 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 PLCB4Q15147 1175 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 C22orf23Q9BZE7 217 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 NBPF3Q9H094 633 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 TIMELESSQ9UNS1 1208 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 CCT6AP40227 531 aaKnown RBP14.47□□□□□ -0.09
TCF4-248ENST00000616053 SMC6Q96SB8 1091 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 BACH1O14867 736 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 AKNAD1Q5T1N1 836 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 NSMCE1Q8WV22 266 aa14.47□□□□□ -0.09
TCF4-248ENST00000616053 GSTO1P78417 241 aa14.46□□□□□ -0.09
TCF4-248ENST00000616053 PICK1Q9NRD5 415 aa14.46□□□□□ -0.09
TCF4-248ENST00000616053 TOM1O60784 492 aa14.46□□□□□ -0.09
TCF4-248ENST00000616053 TFCP2L1Q9NZI6 479 aa14.46□□□□□ -0.09
TCF4-248ENST00000616053 UTP14CQ5TAP6 766 aaKnown RBP14.46□□□□□ -0.09
TCF4-248ENST00000616053 JPH4Q96JJ6 628 aa14.46□□□□□ -0.09
TCF4-248ENST00000616053 KRT32Q14532 448 aa14.46□□□□□ -0.09
TCF4-248ENST00000616053 KIFC2Q96AC6 838 aa14.46□□□□□ -0.09
TCF4-248ENST00000616053 PPP2R5CQ13362 524 aa14.46□□□□□ -0.1
TCF4-248ENST00000616053 GBP3Q9H0R5 595 aa14.46□□□□□ -0.1
TCF4-248ENST00000616053 FAM13AO94988 1023 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms