RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 GNAI3P08754 354 aa15.63■□□□□ 0.09
MSH6-214ENST00000616033 GTF2F1P35269 517 aaKnown RBP eCLIP15.63■□□□□ 0.092e-7■■■■■ 27.6
MSH6-214ENST00000616033 IRX5P78411 483 aaPredicted RBP15.63■□□□□ 0.09
MSH6-214ENST00000616033 MTMR6Q9Y217 621 aa15.63■□□□□ 0.09
MSH6-214ENST00000616033 FAM200AQ8TCP9 573 aa15.63■□□□□ 0.09
MSH6-214ENST00000616033 PUS7Q96PZ0 661 aaKnown RBP15.63■□□□□ 0.09
MSH6-214ENST00000616033 OSBPL3Q9H4L5 887 aa15.63■□□□□ 0.09
MSH6-214ENST00000616033 ADGRB3O60242 1522 aa15.63■□□□□ 0.09
MSH6-214ENST00000616033 ATP8B2P98198 1209 aa15.62■□□□□ 0.09
MSH6-214ENST00000616033 MTHFSDQ2M296 383 aaKnown RBP15.62■□□□□ 0.09
MSH6-214ENST00000616033 SPATA32Q96LK8 384 aa15.62■□□□□ 0.09
MSH6-214ENST00000616033 NRXN1Q9ULB1 1477 aa15.62■□□□□ 0.09
MSH6-214ENST00000616033 USP27XA6NNY8 438 aa15.62■□□□□ 0.09
MSH6-214ENST00000616033 ZNF165P49910 485 aa15.62■□□□□ 0.09
MSH6-214ENST00000616033 KRT85P78386 507 aa15.62■□□□□ 0.09
MSH6-214ENST00000616033 ME3Q16798 604 aa15.62■□□□□ 0.09
MSH6-214ENST00000616033 C14orf37Q86TY3 774 aa15.62■□□□□ 0.09
MSH6-214ENST00000616033 CNTROBQ8N137 903 aa15.62■□□□□ 0.09
MSH6-214ENST00000616033 FMNL2Q96PY5 1086 aa15.62■□□□□ 0.09
MSH6-214ENST00000616033 MRVI1Q9Y6F6 885 aa15.62■□□□□ 0.09
MSH6-214ENST00000616033 GOLGA6L19H0YKK7 550 aa15.61■□□□□ 0.09
MSH6-214ENST00000616033 CACTINQ8WUQ7 758 aaKnown RBP15.61■□□□□ 0.09
MSH6-214ENST00000616033 SECISBP2LQ93073 1101 aaKnown RBP15.61■□□□□ 0.09
MSH6-214ENST00000616033 CD163L1Q9NR16 1453 aa15.61■□□□□ 0.09
MSH6-214ENST00000616033 USP16Q9Y5T5 823 aa15.61■□□□□ 0.09
MSH6-214ENST00000616033 CYP46A1Q9Y6A2 500 aa15.61■□□□□ 0.09
MSH6-214ENST00000616033 LMTK2Q8IWU2 1503 aa15.61■□□□□ 0.09
MSH6-214ENST00000616033 SGSM2O43147 1006 aa15.61■□□□□ 0.09
MSH6-214ENST00000616033 RAB11FIP3O75154 756 aa15.61■□□□□ 0.09
MSH6-214ENST00000616033 RHPN1Q8TCX5 695 aa15.61■□□□□ 0.09
MSH6-214ENST00000616033 SIGLEC1Q9BZZ2 1709 aa15.6■□□□□ 0.09
MSH6-214ENST00000616033 CCDC144BQ3MJ40 725 aa15.6■□□□□ 0.09
MSH6-214ENST00000616033 CCDC144CPQ8IYA2 1237 aa15.6■□□□□ 0.09
MSH6-214ENST00000616033 ARHGAP31Q2M1Z3 1444 aa15.6■□□□□ 0.09
MSH6-214ENST00000616033 CEP135Q66GS9 1140 aa15.6■□□□□ 0.09
MSH6-214ENST00000616033 ZSCAN25Q6NSZ9 544 aa15.6■□□□□ 0.09
MSH6-214ENST00000616033 ZNF215Q9UL58 517 aaPredicted RBP15.6■□□□□ 0.09
MSH6-214ENST00000616033 PA2G4Q9UQ80 394 aaKnown RBP15.6■□□□□ 0.09
MSH6-214ENST00000616033 MYO3AQ8NEV4 1616 aa15.6■□□□□ 0.09
MSH6-214ENST00000616033 BECN2A8MW95 431 aa15.59■□□□□ 0.09
MSH6-214ENST00000616033 IRX3P78415 501 aaPredicted RBP15.59■□□□□ 0.09
MSH6-214ENST00000616033 ELF2Q15723 593 aa15.59■□□□□ 0.09
MSH6-214ENST00000616033 OGFRQ9NZT2 677 aa15.59■□□□□ 0.09
MSH6-214ENST00000616033 MAP2P11137 1827 aaKnown RBP15.59■□□□□ 0.09
MSH6-214ENST00000616033 NR1I2O75469 434 aa15.59■□□□□ 0.09
MSH6-214ENST00000616033 HSP90B1P14625 803 aaKnown RBP15.59■□□□□ 0.09
MSH6-214ENST00000616033 LRRC2Q9BYS8 371 aa15.59■□□□□ 0.09
MSH6-214ENST00000616033 NBPF7P0C2Y1 421 aaPredicted RBP15.59■□□□□ 0.09
MSH6-214ENST00000616033 SETBP1Q9Y6X0 1596 aa15.59■□□□□ 0.09
MSH6-214ENST00000616033 RAD50Q92878 1312 aa15.59■□□□□ 0.09
MSH6-214ENST00000616033 ZFYVE9O95405 1425 aa15.58■□□□□ 0.09
MSH6-214ENST00000616033 AMPHP49418 695 aa15.58■□□□□ 0.09
MSH6-214ENST00000616033 ANKRD7Q92527 254 aa15.58■□□□□ 0.09
MSH6-214ENST00000616033 GTF3C6Q969F1 213 aa15.58■□□□□ 0.09
MSH6-214ENST00000616033 FUCA2Q9BTY2 467 aa15.58■□□□□ 0.09
MSH6-214ENST00000616033 USP44Q9H0E7 712 aa15.58■□□□□ 0.09
MSH6-214ENST00000616033 SIL1Q9H173 461 aa15.58■□□□□ 0.09
MSH6-214ENST00000616033 HYPKQ9NX55 129 aa15.58■□□□□ 0.09
MSH6-214ENST00000616033 ZKSCAN1P17029 563 aaPredicted RBP15.58■□□□□ 0.08
MSH6-214ENST00000616033 LARP1Q6PKG0 1096 aaKnown RBP15.58■□□□□ 0.08
MSH6-214ENST00000616033 USHBP1Q8N6Y0 703 aa15.58■□□□□ 0.08
MSH6-214ENST00000616033 LSG1Q9H089 658 aaKnown RBP15.58■□□□□ 0.08
MSH6-214ENST00000616033 CTNNA3Q9UI47 895 aa15.58■□□□□ 0.08
MSH6-214ENST00000616033 TPCN1Q9ULQ1 816 aa15.58■□□□□ 0.08
MSH6-214ENST00000616033 SOS1Q07889 1333 aaPredicted RBP15.58■□□□□ 0.08
MSH6-214ENST00000616033 WASLO00401 505 aaPredicted RBP15.57■□□□□ 0.08
MSH6-214ENST00000616033 ZC3H13Q5T200 1668 aaKnown RBP15.57■□□□□ 0.08
MSH6-214ENST00000616033 GUCY1B3Q02153 619 aa15.57■□□□□ 0.08
MSH6-214ENST00000616033 HDGFL1Q5TGJ6 251 aa15.57■□□□□ 0.08
MSH6-214ENST00000616033 CCDC30Q5VVM6 783 aa15.57■□□□□ 0.08
MSH6-214ENST00000616033 FAM227BQ96M60 508 aa15.57■□□□□ 0.08
MSH6-214ENST00000616033 METP08581 1390 aa15.56■□□□□ 0.08
MSH6-214ENST00000616033 SMTNL1A8MU46 457 aa15.56■□□□□ 0.08
MSH6-214ENST00000616033 H3BQV1 296 aa15.56■□□□□ 0.08
MSH6-214ENST00000616033 TPM3P06753 285 aa15.56■□□□□ 0.08
MSH6-214ENST00000616033 LTKP29376 864 aa15.56■□□□□ 0.08
MSH6-214ENST00000616033 ZNF75DP51815 510 aa15.56■□□□□ 0.08
MSH6-214ENST00000616033 TAF7Q15545 349 aaPredicted RBP15.56■□□□□ 0.08
MSH6-214ENST00000616033 PTPN14Q15678 1187 aa15.56■□□□□ 0.08
MSH6-214ENST00000616033 IFFO2Q5TF58 517 aa15.56■□□□□ 0.08
MSH6-214ENST00000616033 TTC14Q96N46 770 aa15.56■□□□□ 0.08
MSH6-214ENST00000616033 CCDC8Q9H0W5 538 aaPredicted RBP15.56■□□□□ 0.08
MSH6-214ENST00000616033 FAM177A1Q8N128 213 aaPredicted RBP15.56■□□□□ 0.08
MSH6-214ENST00000616033 FTOQ9C0B1 505 aaKnown RBP eCLIP15.56■□□□□ 0.08
MSH6-214ENST00000616033 SKILP12757 684 aa15.56■□□□□ 0.08
MSH6-214ENST00000616033 NDUFB9Q9Y6M9 179 aa15.56■□□□□ 0.08
MSH6-214ENST00000616033 POLR3GO15318 223 aaPredicted RBP15.55■□□□□ 0.08
MSH6-214ENST00000616033 JAK2O60674 1132 aa15.55■□□□□ 0.08
MSH6-214ENST00000616033 IFIT2P09913 472 aaKnown RBP15.55■□□□□ 0.08
MSH6-214ENST00000616033 TAF6LQ9Y6J9 622 aa15.55■□□□□ 0.08
MSH6-214ENST00000616033 DIP2BQ9P265 1576 aa15.55■□□□□ 0.08
MSH6-214ENST00000616033 CCDC61Q9Y6R9 512 aa15.55■□□□□ 0.08
MSH6-214ENST00000616033 ISM2Q6H9L7 571 aa15.55■□□□□ 0.08
MSH6-214ENST00000616033 TMEM87AQ8NBN3 555 aa15.55■□□□□ 0.08
MSH6-214ENST00000616033 BOLA2Q9H3K6 86 aa15.55■□□□□ 0.08
MSH6-214ENST00000616033 ARHGEF28Q8N1W1 1705 aaKnown RBP15.54■□□□□ 0.08
MSH6-214ENST00000616033 MAP3K19Q56UN5 1328 aa15.54■□□□□ 0.08
MSH6-214ENST00000616033 FEZ1Q99689 392 aa15.54■□□□□ 0.08
MSH6-214ENST00000616033 RBM8AQ9Y5S9 174 aaKnown RBP15.54■□□□□ 0.08
MSH6-214ENST00000616033 RICTORQ6R327 1708 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms