RNA–Protein interactions for RNA: ENST00000616018.1

AC239809.3-218, humanhuman

TSL 5 BASIC

Gene AC239809.3, Length 1,023 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239809.3-218ENST00000616018 CHRNA5P30532 468 aa10.97□□□□□ -0.65
AC239809.3-218ENST00000616018 USP42Q9H9J4 1324 aaKnown RBP10.96□□□□□ -0.65
AC239809.3-218ENST00000616018 HTRA3P83110 453 aa10.96□□□□□ -0.65
AC239809.3-218ENST00000616018 SULT6B1Q6IMI4 303 aa10.96□□□□□ -0.65
AC239809.3-218ENST00000616018 PANK3Q9H999 370 aa10.96□□□□□ -0.65
AC239809.3-218ENST00000616018 TIMELESSQ9UNS1 1208 aa10.96□□□□□ -0.65
AC239809.3-218ENST00000616018 C4AP0C0L4 1744 aa10.95□□□□□ -0.66
AC239809.3-218ENST00000616018 VEGFAP15692 232 aaPredicted RBP10.95□□□□□ -0.66
AC239809.3-218ENST00000616018 USPL1Q5W0Q7 1092 aa10.95□□□□□ -0.66
AC239809.3-218ENST00000616018 EFCAB3Q8N7B9 438 aa10.95□□□□□ -0.66
AC239809.3-218ENST00000616018 GOLGB1Q14789 3259 aaKnown RBP10.94□□□□□ -0.66
AC239809.3-218ENST00000616018 POLRMTO00411 1230 aaKnown RBP10.94□□□□□ -0.66
AC239809.3-218ENST00000616018 HOXB1P14653 301 aaPredicted RBP10.94□□□□□ -0.66
AC239809.3-218ENST00000616018 TM4SF1P30408 202 aa10.94□□□□□ -0.66
AC239809.3-218ENST00000616018 DDR1Q08345 913 aa10.94□□□□□ -0.66
AC239809.3-218ENST00000616018 TNS4Q8IZW8 715 aa10.94□□□□□ -0.66
AC239809.3-218ENST00000616018 JMYQ8N9B5 988 aa10.94□□□□□ -0.66
AC239809.3-218ENST00000616018 KNSTRNQ9Y448 316 aa10.94□□□□□ -0.66
AC239809.3-218ENST00000616018 KCPQ6ZWJ8 1503 aa10.94□□□□□ -0.66
AC239809.3-218ENST00000616018 KIF13BQ9NQT8 1826 aa10.93□□□□□ -0.66
AC239809.3-218ENST00000616018 H0YIN7 160 aa10.93□□□□□ -0.66
AC239809.3-218ENST00000616018 LMNB1P20700 586 aa10.93□□□□□ -0.66
AC239809.3-218ENST00000616018 EIF4G2P78344 907 aaKnown RBP eCLIP10.93□□□□□ -0.66
AC239809.3-218ENST00000616018 TRIM26Q12899 539 aaPredicted RBP10.93□□□□□ -0.66
AC239809.3-218ENST00000616018 AKAP4Q5JQC9 854 aa10.93□□□□□ -0.66
AC239809.3-218ENST00000616018 COL13A1Q5TAT6 717 aaPredicted RBP10.93□□□□□ -0.66
AC239809.3-218ENST00000616018 INTS5Q6P9B9 1019 aaKnown RBP10.93□□□□□ -0.66
AC239809.3-218ENST00000616018 NPM2Q86SE8 214 aaKnown RBP10.93□□□□□ -0.66
AC239809.3-218ENST00000616018 AEBP1Q8IUX7 1158 aa10.93□□□□□ -0.66
AC239809.3-218ENST00000616018 DNAJC10Q8IXB1 793 aa10.93□□□□□ -0.66
AC239809.3-218ENST00000616018 TTLL6Q8N841 843 aa10.93□□□□□ -0.66
AC239809.3-218ENST00000616018 KDM6AO15550 1401 aaPredicted RBP10.92□□□□□ -0.66
AC239809.3-218ENST00000616018 ZC3H4Q9UPT8 1303 aaKnown RBP10.92□□□□□ -0.66
AC239809.3-218ENST00000616018 GLTPD2A6NH11 291 aa10.92□□□□□ -0.66
AC239809.3-218ENST00000616018 NPHP1O15259 732 aa10.92□□□□□ -0.66
AC239809.3-218ENST00000616018 SERPINB2P05120 415 aa10.92□□□□□ -0.66
AC239809.3-218ENST00000616018 C2CD5Q86YS7 1000 aa10.92□□□□□ -0.66
AC239809.3-218ENST00000616018 SLC52A2Q9HAB3 445 aa10.92□□□□□ -0.66
AC239809.3-218ENST00000616018 NARFQ9UHQ1 456 aa10.92□□□□□ -0.66
AC239809.3-218ENST00000616018 ANKRD26Q9UPS8 1709 aa10.92□□□□□ -0.66
AC239809.3-218ENST00000616018 RASSF7Q02833 373 aa10.91□□□□□ -0.66
AC239809.3-218ENST00000616018 NFIXQ14938 502 aa10.91□□□□□ -0.66
AC239809.3-218ENST00000616018 DOK7Q18PE1 504 aa10.91□□□□□ -0.66
AC239809.3-218ENST00000616018 BICDL1Q6ZP65 573 aa10.91□□□□□ -0.66
AC239809.3-218ENST00000616018 ZNF622Q969S3 477 aaKnown RBP eCLIP10.91□□□□□ -0.66
AC239809.3-218ENST00000616018 ZNF831Q5JPB2 1677 aa10.91□□□□□ -0.66
AC239809.3-218ENST00000616018 A0A087WZG4 1122 aa10.9□□□□□ -0.66
AC239809.3-218ENST00000616018 STARD3NLO95772 234 aa10.9□□□□□ -0.66
AC239809.3-218ENST00000616018 CYP19A1P11511 503 aaPredicted RBP10.9□□□□□ -0.66
AC239809.3-218ENST00000616018 CANXP27824 592 aaKnown RBP10.9□□□□□ -0.66
AC239809.3-218ENST00000616018 SLC39A6Q13433 755 aa10.9□□□□□ -0.66
AC239809.3-218ENST00000616018 TTC5Q8N0Z6 440 aa10.9□□□□□ -0.66
AC239809.3-218ENST00000616018 PCGF6Q9BYE7 350 aa10.9□□□□□ -0.66
AC239809.3-218ENST00000616018 LGR6Q9HBX8 967 aa10.9□□□□□ -0.66
AC239809.3-218ENST00000616018 WDR90Q96KV7 1748 aa10.89□□□□□ -0.67
AC239809.3-218ENST00000616018 KIAA1551Q9HCM1 1747 aa10.89□□□□□ -0.67
AC239809.3-218ENST00000616018 SOS1Q07889 1333 aaPredicted RBP10.89□□□□□ -0.67
AC239809.3-218ENST00000616018 RNMTO43148 476 aaKnown RBP10.89□□□□□ -0.67
AC239809.3-218ENST00000616018 IL13P35225 146 aa10.89□□□□□ -0.67
AC239809.3-218ENST00000616018 ZNF710Q8N1W2 664 aa10.89□□□□□ -0.67
AC239809.3-218ENST00000616018 PDZRN3Q9UPQ7 1066 aa10.89□□□□□ -0.67
AC239809.3-218ENST00000616018 ZNF330Q9Y3S2 320 aaPredicted RBP10.89□□□□□ -0.67
AC239809.3-218ENST00000616018 COL5A3P25940 1745 aaPredicted RBP10.89□□□□□ -0.67
AC239809.3-218ENST00000616018 HMOX1P09601 288 aa10.88□□□□□ -0.67
AC239809.3-218ENST00000616018 HSPA5P11021 654 aaKnown RBP10.88□□□□□ -0.67
AC239809.3-218ENST00000616018 PDE6BP35913 854 aa10.88□□□□□ -0.67
AC239809.3-218ENST00000616018 ERFEQ4G0M1 354 aa10.88□□□□□ -0.67
AC239809.3-218ENST00000616018 VSIG10Q8N0Z9 540 aa10.88□□□□□ -0.67
AC239809.3-218ENST00000616018 ARFGEF1Q9Y6D6 1849 aa10.88□□□□□ -0.67
AC239809.3-218ENST00000616018 COL15A1P39059 1388 aa10.88□□□□□ -0.67
AC239809.3-218ENST00000616018 HSPA1AP0DMV8 641 aaKnown RBP10.87□□□□□ -0.67
AC239809.3-218ENST00000616018 HSPA1BP0DMV9 641 aaKnown RBP10.87□□□□□ -0.67
AC239809.3-218ENST00000616018 PRELPP51888 382 aa10.87□□□□□ -0.67
AC239809.3-218ENST00000616018 TEX13AQ9BXU3 409 aaPredicted RBP10.87□□□□□ -0.67
AC239809.3-218ENST00000616018 ZBTB1Q9Y2K1 713 aa10.87□□□□□ -0.67
AC239809.3-218ENST00000616018 C21orf2O43822 256 aa10.86□□□□□ -0.67
AC239809.3-218ENST00000616018 TEFQ10587 303 aa10.86□□□□□ -0.67
AC239809.3-218ENST00000616018 MICALL2Q8IY33 904 aa10.86□□□□□ -0.67
AC239809.3-218ENST00000616018 MYH14Q7Z406 1995 aaKnown RBP10.86□□□□□ -0.67
AC239809.3-218ENST00000616018 BRCA1P38398 1863 aaKnown RBP10.85□□□□□ -0.67
AC239809.3-218ENST00000616018 CEP350Q5VT06 3117 aa10.85□□□□□ -0.67
AC239809.3-218ENST00000616018 RIOK3O14730 519 aaKnown RBP10.85□□□□□ -0.67
AC239809.3-218ENST00000616018 DIAPH1O60610 1272 aaKnown RBP10.85□□□□□ -0.67
AC239809.3-218ENST00000616018 MTHFSDQ2M296 383 aaKnown RBP10.85□□□□□ -0.67
AC239809.3-218ENST00000616018 RNF25Q96BH1 459 aaPredicted RBP10.85□□□□□ -0.67
AC239809.3-218ENST00000616018 SETDB2Q96T68 719 aa10.85□□□□□ -0.67
AC239809.3-218ENST00000616018 BRIP1Q9BX63 1249 aa10.85□□□□□ -0.67
AC239809.3-218ENST00000616018 TNRC6CQ9HCJ0 1690 aaKnown RBP10.85□□□□□ -0.67
AC239809.3-218ENST00000616018 CLSPNQ9HAW4 1339 aa10.84□□□□□ -0.67
AC239809.3-218ENST00000616018 RIMBP2O15034 1052 aa10.84□□□□□ -0.67
AC239809.3-218ENST00000616018 ST5P78524 1137 aa10.84□□□□□ -0.67
AC239809.3-218ENST00000616018 SOGA3Q5TF21 947 aa10.84□□□□□ -0.67
AC239809.3-218ENST00000616018 TMEM92Q6UXU6 159 aa10.84□□□□□ -0.67
AC239809.3-218ENST00000616018 CNKSR1Q969H4 720 aa10.84□□□□□ -0.67
AC239809.3-218ENST00000616018 BCL2L12Q9HB09 334 aa10.84□□□□□ -0.67
AC239809.3-218ENST00000616018 TBC1D2BQ9UPU7 963 aa10.84□□□□□ -0.67
AC239809.3-218ENST00000616018 NFKBIEO00221 500 aa10.83□□□□□ -0.68
AC239809.3-218ENST00000616018 TBC1D9BQ66K14 1250 aa10.83□□□□□ -0.68
AC239809.3-218ENST00000616018 RNF166Q96A37 237 aaPredicted RBP10.83□□□□□ -0.68
AC239809.3-218ENST00000616018 TAOK3Q9H2K8 898 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms