RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 PA2G4Q9UQ80 394 aaKnown RBP23.52■■□□□ 1.36
MMP28-204ENST00000615136 TNS2Q63HR2 1409 aa23.51■■□□□ 1.35
MMP28-204ENST00000615136 EIF5BO60841 1220 aaKnown RBP23.51■■□□□ 1.35
MMP28-204ENST00000615136 JARID2Q92833 1246 aaPredicted RBP23.51■■□□□ 1.35
MMP28-204ENST00000615136 CHMP5Q9NZZ3 219 aa23.51■■□□□ 1.35
MMP28-204ENST00000615136 RAB11FIP3O75154 756 aa23.5■■□□□ 1.35
MMP28-204ENST00000615136 A1BGP04217 495 aa23.5■■□□□ 1.35
MMP28-204ENST00000615136 GCKRQ14397 625 aa23.5■■□□□ 1.35
MMP28-204ENST00000615136 STAP2Q9UGK3 403 aa23.5■■□□□ 1.35
MMP28-204ENST00000615136 PHLPP1O60346 1717 aa23.49■■□□□ 1.35
MMP28-204ENST00000615136 ADAMTS2O95450 1211 aa23.49■■□□□ 1.35
MMP28-204ENST00000615136 NEXNQ0ZGT2 675 aa23.49■■□□□ 1.35
MMP28-204ENST00000615136 EPHA10Q5JZY3 1008 aa23.49■■□□□ 1.35
MMP28-204ENST00000615136 ATP5J2-PTCD1G3V325 749 aa23.48■■□□□ 1.35
MMP28-204ENST00000615136 TTLL7Q6ZT98 887 aa23.48■■□□□ 1.35
MMP28-204ENST00000615136 UNC5CLQ8IV45 518 aa23.48■■□□□ 1.35
MMP28-204ENST00000615136 TMOD3Q9NYL9 352 aa23.48■■□□□ 1.35
MMP28-204ENST00000615136 DDIT3P35638 169 aa23.47■■□□□ 1.35
MMP28-204ENST00000615136 SPRYD3Q8NCJ5 442 aa23.47■■□□□ 1.35
MMP28-204ENST00000615136 PIGBQ92521 554 aa23.47■■□□□ 1.35
MMP28-204ENST00000615136 KIF1BPQ96EK5 621 aa23.47■■□□□ 1.35
MMP28-204ENST00000615136 ASAP1Q9ULH1 1129 aa23.47■■□□□ 1.35
MMP28-204ENST00000615136 AFDNP55196 1824 aaKnown RBP23.47■■□□□ 1.35
MMP28-204ENST00000615136 PLCH1Q4KWH8 1693 aa23.46■■□□□ 1.35
MMP28-204ENST00000615136 RBM42Q9BTD8 480 aaKnown RBP23.46■■□□□ 1.35
MMP28-204ENST00000615136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.46■■□□□ 1.35
MMP28-204ENST00000615136 ITGB4P16144 1822 aa23.46■■□□□ 1.35
MMP28-204ENST00000615136 PIP4K2BP78356 416 aa23.45■■□□□ 1.34
MMP28-204ENST00000615136 PLBD2Q8NHP8 589 aa23.45■■□□□ 1.34
MMP28-204ENST00000615136 USP26Q9BXU7 913 aa23.45■■□□□ 1.34
MMP28-204ENST00000615136 ERBB4Q15303 1308 aa23.44■■□□□ 1.34
MMP28-204ENST00000615136 OS9Q13438 667 aaPredicted RBP23.43■■□□□ 1.34
MMP28-204ENST00000615136 KLHDC4Q8TBB5 520 aa23.43■■□□□ 1.34
MMP28-204ENST00000615136 PI4K2BQ8TCG2 481 aa23.43■■□□□ 1.34
MMP28-204ENST00000615136 CD2BP2O95400 341 aaKnown RBP23.43■■□□□ 1.34
MMP28-204ENST00000615136 RILPL2Q969X0 211 aa23.43■■□□□ 1.34
MMP28-204ENST00000615136 ATG3Q9NT62 314 aa23.43■■□□□ 1.34
MMP28-204ENST00000615136 NUP188Q5SRE5 1749 aa23.43■■□□□ 1.34
MMP28-204ENST00000615136 WNK3Q9BYP7 1800 aa23.42■■□□□ 1.34
MMP28-204ENST00000615136 TRIM6-TRIM34B2RNG4 842 aa23.42■■□□□ 1.34
MMP28-204ENST00000615136 MAP4K4O95819 1239 aaPredicted RBP23.42■■□□□ 1.34
MMP28-204ENST00000615136 MCM4P33991 863 aa23.42■■□□□ 1.34
MMP28-204ENST00000615136 HSP90AB4PQ58FF6 505 aa23.42■■□□□ 1.34
MMP28-204ENST00000615136 UBE3BQ7Z3V4 1068 aa23.42■■□□□ 1.34
MMP28-204ENST00000615136 HDAC5Q9UQL6 1122 aa23.42■■□□□ 1.34
MMP28-204ENST00000615136 AOX1Q06278 1338 aa23.4■■□□□ 1.34
MMP28-204ENST00000615136 NRAPQ86VF7 1730 aa23.4■■□□□ 1.34
MMP28-204ENST00000615136 NUTM2BA6NNL0 878 aaPredicted RBP23.4■■□□□ 1.34
MMP28-204ENST00000615136 NUTM2EB1AL46 878 aaPredicted RBP23.4■■□□□ 1.34
MMP28-204ENST00000615136 SASH1O94885 1247 aa23.4■■□□□ 1.34
MMP28-204ENST00000615136 CASC1Q6TDU7 716 aa23.4■■□□□ 1.34
MMP28-204ENST00000615136 NUTM2AQ8IVF1 878 aaPredicted RBP23.4■■□□□ 1.34
MMP28-204ENST00000615136 ZBTB3Q9H5J0 574 aa23.4■■□□□ 1.34
MMP28-204ENST00000615136 CIZ1Q9ULV3 898 aaPredicted RBP23.4■■□□□ 1.34
MMP28-204ENST00000615136 DNAJC10Q8IXB1 793 aa23.4■■□□□ 1.34
MMP28-204ENST00000615136 SIL1Q9H173 461 aa23.4■■□□□ 1.34
MMP28-204ENST00000615136 KAT6BQ8WYB5 2073 aa23.39■■□□□ 1.34
MMP28-204ENST00000615136 A0A087WZG4 1122 aa23.39■■□□□ 1.34
MMP28-204ENST00000615136 CASP7P55210 303 aa23.39■■□□□ 1.34
MMP28-204ENST00000615136 EXOC5O00471 708 aa23.38■■□□□ 1.33
MMP28-204ENST00000615136 CHMLP26374 656 aa23.38■■□□□ 1.33
MMP28-204ENST00000615136 K7ELQ4 463 aaPredicted RBP23.38■■□□□ 1.33
MMP28-204ENST00000615136 ERC2O15083 957 aa23.38■■□□□ 1.33
MMP28-204ENST00000615136 SLC4A9Q96Q91 983 aa23.38■■□□□ 1.33
MMP28-204ENST00000615136 BCL9O00512 1426 aa23.37■■□□□ 1.33
MMP28-204ENST00000615136 IL25Q9H293 177 aa23.37■■□□□ 1.33
MMP28-204ENST00000615136 ESYT1Q9BSJ8 1104 aa23.37■■□□□ 1.33
MMP28-204ENST00000615136 SPATA31A1Q5TZJ5 1347 aa23.36■■□□□ 1.33
MMP28-204ENST00000615136 TJP1Q07157 1748 aa23.36■■□□□ 1.33
MMP28-204ENST00000615136 TOM1O60784 492 aa23.36■■□□□ 1.33
MMP28-204ENST00000615136 CLASRPQ8N2M8 674 aaKnown RBP23.36■■□□□ 1.33
MMP28-204ENST00000615136 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.36■■□□□ 1.33
MMP28-204ENST00000615136 RFX5P48382 616 aaPredicted RBP23.35■■□□□ 1.33
MMP28-204ENST00000615136 SYTL4Q96C24 671 aaPredicted RBP23.35■■□□□ 1.33
MMP28-204ENST00000615136 ZNF330Q9Y3S2 320 aaPredicted RBP23.35■■□□□ 1.33
MMP28-204ENST00000615136 USP42Q9H9J4 1324 aaKnown RBP23.35■■□□□ 1.33
MMP28-204ENST00000615136 AK9Q5TCS8 1911 aa23.34■■□□□ 1.33
MMP28-204ENST00000615136 G3BP1Q13283 466 aaKnown RBP eCLIP23.34■■□□□ 1.33
MMP28-204ENST00000615136 RABEP1Q15276 862 aa23.34■■□□□ 1.33
MMP28-204ENST00000615136 RABL6Q3YEC7 729 aaPredicted RBP23.34■■□□□ 1.33
MMP28-204ENST00000615136 EAF2Q96CJ1 260 aaPredicted RBP23.34■■□□□ 1.33
MMP28-204ENST00000615136 LRP6O75581 1613 aa23.34■■□□□ 1.33
MMP28-204ENST00000615136 REC8O95072 547 aa23.33■■□□□ 1.33
MMP28-204ENST00000615136 AACSQ86V21 672 aa23.33■■□□□ 1.33
MMP28-204ENST00000615136 ERC1Q8IUD2 1116 aa23.33■■□□□ 1.33
MMP28-204ENST00000615136 DOT1LQ8TEK3 1739 aa23.33■■□□□ 1.33
MMP28-204ENST00000615136 H7C1W4 665 aa23.33■■□□□ 1.32
MMP28-204ENST00000615136 TLR7Q9NYK1 1049 aaKnown RBP23.33■■□□□ 1.32
MMP28-204ENST00000615136 PRIM1P49642 420 aaKnown RBP23.32■■□□□ 1.32
MMP28-204ENST00000615136 PTPN12Q05209 780 aaKnown RBP23.32■■□□□ 1.32
MMP28-204ENST00000615136 VSIG10Q8N0Z9 540 aa23.32■■□□□ 1.32
MMP28-204ENST00000615136 COL15A1P39059 1388 aa23.32■■□□□ 1.32
MMP28-204ENST00000615136 FOXO4P98177 505 aa23.32■■□□□ 1.32
MMP28-204ENST00000615136 CCDC8Q9H0W5 538 aaPredicted RBP23.32■■□□□ 1.32
MMP28-204ENST00000615136 CWC25Q9NXE8 425 aaPredicted RBP23.32■■□□□ 1.32
MMP28-204ENST00000615136 DDX11L8A8MPP1 907 aa23.31■■□□□ 1.32
MMP28-204ENST00000615136 RAB3GAP1Q15042 981 aa23.31■■□□□ 1.32
MMP28-204ENST00000615136 TTC41PQ6P2S7 1318 aa23.31■■□□□ 1.32
MMP28-204ENST00000615136 IFIT2P09913 472 aaKnown RBP23.3■■□□□ 1.32
MMP28-204ENST00000615136 IL27Q8NEV9 243 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms