RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 ZFYVE27Q5T4F4 411 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 RPGRQ92834 1020 aaKnown RBP4.48□□□□□ -1.69
LTN1-207ENST00000614971 ZNF496Q96IT1 587 aaPredicted RBP4.48□□□□□ -1.69
LTN1-207ENST00000614971 PICALMQ13492 652 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 IMMTQ16891 758 aaKnown RBP4.48□□□□□ -1.69
LTN1-207ENST00000614971 FAM43AQ8N2R8 423 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 IFIT3O14879 490 aaKnown RBP4.48□□□□□ -1.69
LTN1-207ENST00000614971 KRT18P05783 430 aaKnown RBP4.48□□□□□ -1.69
LTN1-207ENST00000614971 TFCP2Q12800 502 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 CAVIN4Q5BKX8 364 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 CCAR1Q8IX12 1150 aaKnown RBP4.48□□□□□ -1.69
LTN1-207ENST00000614971 USP16Q9Y5T5 823 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 ABCC1P33527 1531 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 ABCC2Q92887 1545 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 ZNF213O14771 459 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 IL13P35225 146 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 KRT85P78386 507 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 C8orf34Q49A92 452 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 TTC22Q5TAA0 569 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 CEP85Q6P2H3 762 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 DZIP3Q86Y13 1208 aaKnown RBP4.48□□□□□ -1.69
LTN1-207ENST00000614971 TRIM22Q8IYM9 498 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 IL2RBP14784 551 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 DNA2P51530 1060 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 SMIM5Q71RC9 77 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 METP08581 1390 aa4.48□□□□□ -1.69
LTN1-207ENST00000614971 DNAJC10Q8IXB1 793 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 CRACR2BQ8N4Y2 399 aaPredicted RBP4.47□□□□□ -1.69
LTN1-207ENST00000614971 CEP89Q96ST8 783 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 NUCB1Q02818 461 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 SLC9C2Q5TAH2 1124 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 MSL1Q68DK7 614 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 DHX37Q8IY37 1157 aaKnown RBP4.47□□□□□ -1.69
LTN1-207ENST00000614971 CDK5RAP3Q96JB5 506 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 BRMS1Q9HCU9 246 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 HIP1O00291 1037 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 GNPATO15228 680 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 PRDM1O75626 825 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 SERPINC1P01008 464 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 XBP1P17861 261 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 PDCP20941 246 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 TMEM132AQ24JP5 1023 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 TSPY26PQ9H489 355 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 GRPEL1Q9HAV7 217 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 TFCP2L1Q9NZI6 479 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 WDR33Q9C0J8 1336 aaKnown RBP4.47□□□□□ -1.69
LTN1-207ENST00000614971 GJB2P29033 226 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 ZNF830Q96NB3 372 aaPredicted RBP4.47□□□□□ -1.69
LTN1-207ENST00000614971 ZBTB40Q9NUA8 1239 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 LMTK3Q96Q04 1460 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 USP19O94966 1318 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 PATL2C9JE40 543 aaKnown RBP4.47□□□□□ -1.69
LTN1-207ENST00000614971 OFD1O75665 1012 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 HSP90AA2PQ14568 343 aaPredicted RBP4.47□□□□□ -1.69
LTN1-207ENST00000614971 PROSER3Q2NL68 480 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 AKAP4Q5JQC9 854 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 ZNF790Q6PG37 636 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 ZNF652Q9Y2D9 606 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 NUP160Q12769 1436 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 PBRM1Q86U86 1689 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 FLT4P35916 1363 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 hCG_1642624A0A1W2PR95 340 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 RNMTO43148 476 aaKnown RBP4.47□□□□□ -1.69
LTN1-207ENST00000614971 MRE11P49959 708 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 CCDC96Q2M329 555 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 KSR2Q6VAB6 950 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 IL17REQ8NFR9 667 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 USP25Q9UHP3 1055 aa4.47□□□□□ -1.69
LTN1-207ENST00000614971 PIK3R4Q99570 1358 aa4.46□□□□□ -1.69
LTN1-207ENST00000614971 LIG1P18858 919 aa4.46□□□□□ -1.69
LTN1-207ENST00000614971 MAP3K12Q12852 859 aa4.46□□□□□ -1.69
LTN1-207ENST00000614971 AAMPQ13685 434 aa4.46□□□□□ -1.69
LTN1-207ENST00000614971 GIMAP6Q6P9H5 292 aa4.46□□□□□ -1.69
LTN1-207ENST00000614971 FAM227BQ96M60 508 aa4.46□□□□□ -1.69
LTN1-207ENST00000614971 TANGO6Q9C0B7 1094 aa4.46□□□□□ -1.69
LTN1-207ENST00000614971 RBM8AQ9Y5S9 174 aaKnown RBP4.46□□□□□ -1.69
LTN1-207ENST00000614971 U3KPZ7 1027 aaPredicted RBP4.46□□□□□ -1.69
LTN1-207ENST00000614971 ABCC11Q96J66 1382 aa4.46□□□□□ -1.69
LTN1-207ENST00000614971 PTPRCP08575 1304 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 TPM1P09493 284 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 EPS15P42566 896 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 EIF6P56537 245 aaKnown RBP4.46□□□□□ -1.7
LTN1-207ENST00000614971 NMIQ13287 307 aaPredicted RBP4.46□□□□□ -1.7
LTN1-207ENST00000614971 ATP2B3Q16720 1220 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 OLFM4Q6UX06 510 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 ANKRD44Q8N8A2 993 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 CPLX3Q8WVH0 158 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 TMX3Q96JJ7 454 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 TBC1D32Q96NH3 1257 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 SLAIN2Q9P270 581 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 IPO7O95373 1038 aaKnown RBP4.46□□□□□ -1.7
LTN1-207ENST00000614971 SLC3A2P08195 630 aaKnown RBP4.46□□□□□ -1.7
LTN1-207ENST00000614971 GPIHBP1Q8IV16 184 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 SETDB2Q96T68 719 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 DBNDD2Q9BQY9 259 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 ITSN2Q9NZM3 1697 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 IRS4O14654 1257 aaPredicted RBP4.46□□□□□ -1.7
LTN1-207ENST00000614971 TOM1O60784 492 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 MARCKSP29966 332 aaPredicted RBP4.46□□□□□ -1.7
LTN1-207ENST00000614971 BMP2KLQ5H9B9 411 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms