RNA–Protein interactions for RNA: ENST00000614941.4

SYNRG-222, Transcript of synergin gamma, human

TSL 1 (best) BASIC

Gene SYNRG, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-222	ENST00000614941	LRRC8A	Q8IWT6	810 aa		18.88	■□□□□ 0.61
SYNRG-222	ENST00000614941	ERBB3	P21860	1342 aa		18.88	■□□□□ 0.61
SYNRG-222	ENST00000614941	TULP2	O00295	520 aa		18.88	■□□□□ 0.61
SYNRG-222	ENST00000614941	KRT85	P78386	507 aa		18.88	■□□□□ 0.61
SYNRG-222	ENST00000614941	IDI1	Q13907	227 aa		18.88	■□□□□ 0.61
SYNRG-222	ENST00000614941	LARP1B	Q659C4	914 aa	Known RBP	18.88	■□□□□ 0.61
SYNRG-222	ENST00000614941	JAKMIP1	Q96N16	626 aa	Known RBP	18.88	■□□□□ 0.61
SYNRG-222	ENST00000614941	LMTK2	Q8IWU2	1503 aa		18.88	■□□□□ 0.61
SYNRG-222	ENST00000614941	AEBP2	Q6ZN18	517 aa	Predicted RBP	18.87	■□□□□ 0.61
SYNRG-222	ENST00000614941	TCEANC2	Q96MN5	208 aa		18.87	■□□□□ 0.61
SYNRG-222	ENST00000614941	NR1I2	O75469	434 aa		18.87	■□□□□ 0.61
SYNRG-222	ENST00000614941	HYPK	Q9NX55	129 aa		18.87	■□□□□ 0.61
SYNRG-222	ENST00000614941	PTPRC	P08575	1304 aa		18.86	■□□□□ 0.61
SYNRG-222	ENST00000614941	GORAB	Q5T7V8	394 aa		18.86	■□□□□ 0.61
SYNRG-222	ENST00000614941	ERO1A	Q96HE7	468 aa		18.86	■□□□□ 0.61
SYNRG-222	ENST00000614941	UHRF1BP1L	A0JNW5	1464 aa		18.86	■□□□□ 0.61
SYNRG-222	ENST00000614941	DLG5	Q8TDM6	1919 aa		18.86	■□□□□ 0.61
SYNRG-222	ENST00000614941	BICD2	Q8TD16	824 aa		18.86	■□□□□ 0.61
SYNRG-222	ENST00000614941	KIAA0232	Q92628	1395 aa		18.86	■□□□□ 0.61
SYNRG-222	ENST00000614941	MAP2	P11137	1827 aa	Known RBP	18.86	■□□□□ 0.61
SYNRG-222	ENST00000614941	CYP2C19	P33261	490 aa		18.86	■□□□□ 0.61
SYNRG-222	ENST00000614941	RAD51AP2	Q09MP3	1159 aa		18.86	■□□□□ 0.61
SYNRG-222	ENST00000614941	ST3GAL1	Q11201	340 aa		18.86	■□□□□ 0.61
SYNRG-222	ENST00000614941	COL9A3	Q14050	684 aa	Predicted RBP	18.86	■□□□□ 0.61
SYNRG-222	ENST00000614941	NEXMIF	Q5QGS0	1516 aa		18.85	■□□□□ 0.61
SYNRG-222	ENST00000614941	SGSM2	O43147	1006 aa		18.85	■□□□□ 0.61
SYNRG-222	ENST00000614941	SLU7	O95391	586 aa	Known RBP	18.85	■□□□□ 0.61
SYNRG-222	ENST00000614941	PDRG1	Q9NUG6	133 aa		18.85	■□□□□ 0.61
SYNRG-222	ENST00000614941	FEZ2	Q9UHY8	353 aa	Predicted RBP	18.85	■□□□□ 0.61
SYNRG-222	ENST00000614941	PTPRM	P28827	1452 aa		18.85	■□□□□ 0.61
SYNRG-222	ENST00000614941	NPM1	P06748	294 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
SYNRG-222	ENST00000614941	ME3	Q16798	604 aa		18.85	■□□□□ 0.61
SYNRG-222	ENST00000614941	TMX1	Q9H3N1	280 aa		18.85	■□□□□ 0.61
SYNRG-222	ENST00000614941	FAM53C	Q9NYF3	392 aa		18.85	■□□□□ 0.61
SYNRG-222	ENST00000614941	LRRFIP2	Q9Y608	721 aa	Known RBP	18.85	■□□□□ 0.61
SYNRG-222	ENST00000614941	ARAP3	Q8WWN8	1544 aa		18.85	■□□□□ 0.61
SYNRG-222	ENST00000614941	CCDC69	A6NI79	296 aa		18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	PRPF40B	Q6NWY9	871 aa	Known RBP	18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	SSH2	Q76I76	1423 aa		18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	NYAP1	Q6ZVC0	841 aa		18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	WAPL	Q7Z5K2	1190 aa		18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	TDRD7	Q8NHU6	1098 aa	Known RBP	18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	SPATA32	Q96LK8	384 aa		18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	LSG1	Q9H089	658 aa	Known RBP	18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	KIF13A	Q9H1H9	1805 aa		18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	KIDINS220	Q9ULH0	1771 aa		18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	GOLGA6L19	H0YKK7	550 aa		18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	CHL1	O00533	1208 aa		18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	SULT6B1	Q6IMI4	303 aa		18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	KIF1BP	Q96EK5	621 aa		18.84	■□□□□ 0.61
SYNRG-222	ENST00000614941	TNNT3	P45378	269 aa	Predicted RBP	18.83	■□□□□ 0.6
SYNRG-222	ENST00000614941	CLCN6	P51797	869 aa		18.83	■□□□□ 0.6
SYNRG-222	ENST00000614941	CEBPZ	Q03701	1054 aa	Known RBP	18.83	■□□□□ 0.6
SYNRG-222	ENST00000614941	CCDC171	Q6TFL3	1326 aa		18.83	■□□□□ 0.6
SYNRG-222	ENST00000614941	FHOD1	Q9Y613	1164 aa		18.83	■□□□□ 0.6
SYNRG-222	ENST00000614941	BMS1	Q14692	1282 aa	Known RBP	18.82	■□□□□ 0.6
SYNRG-222	ENST00000614941	C11orf57	Q6ZUT1	292 aa	Predicted RBP	18.82	■□□□□ 0.6
SYNRG-222	ENST00000614941	KIF20B	Q96Q89	1820 aa		18.82	■□□□□ 0.6
SYNRG-222	ENST00000614941	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	18.82	■□□□□ 0.6
SYNRG-222	ENST00000614941	CPSF1	Q10570	1443 aa	Known RBP	18.82	■□□□□ 0.6
SYNRG-222	ENST00000614941	PTH1R	Q03431	593 aa		18.81	■□□□□ 0.6
SYNRG-222	ENST00000614941	SLC20A2	Q08357	652 aa		18.81	■□□□□ 0.6
SYNRG-222	ENST00000614941	ERCC4	Q92889	916 aa	Predicted RBP	18.81	■□□□□ 0.6
SYNRG-222	ENST00000614941	ZCCHC17	Q9NP64	241 aa	Known RBP	18.81	■□□□□ 0.6
SYNRG-222	ENST00000614941	ABCA9	Q8IUA7	1624 aa		18.81	■□□□□ 0.6
SYNRG-222	ENST00000614941	CCT4	P50991	539 aa	Known RBP	18.81	■□□□□ 0.6
SYNRG-222	ENST00000614941	STAP2	Q9UGK3	403 aa		18.81	■□□□□ 0.6
SYNRG-222	ENST00000614941	HAP1	P54257	671 aa	Predicted RBP	18.81	■□□□□ 0.6
SYNRG-222	ENST00000614941	STK3	Q13188	491 aa		18.81	■□□□□ 0.6
SYNRG-222	ENST00000614941	ARHGAP29	Q52LW3	1261 aa		18.81	■□□□□ 0.6
SYNRG-222	ENST00000614941	SYT10	Q6XYQ8	523 aa		18.81	■□□□□ 0.6
SYNRG-222	ENST00000614941	CCAR2	Q8N163	923 aa	Known RBP	18.81	■□□□□ 0.6
SYNRG-222	ENST00000614941	PNMA6A	P0CW24	399 aa	Predicted RBP	18.8	■□□□□ 0.6
SYNRG-222	ENST00000614941	CLSTN2	Q9H4D0	955 aa		18.8	■□□□□ 0.6
SYNRG-222	ENST00000614941	SURF6	O75683	361 aa	Known RBP	18.8	■□□□□ 0.6
SYNRG-222	ENST00000614941	PLA2G4A	P47712	749 aa		18.8	■□□□□ 0.6
SYNRG-222	ENST00000614941	IL17RA	Q96F46	866 aa		18.8	■□□□□ 0.6
SYNRG-222	ENST00000614941	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	18.8	■□□□□ 0.6
SYNRG-222	ENST00000614941	STAG3	Q9UJ98	1225 aa		18.8	■□□□□ 0.6
SYNRG-222	ENST00000614941	TPCN1	Q9ULQ1	816 aa		18.8	■□□□□ 0.6
SYNRG-222	ENST00000614941	TAF7L	Q5H9L4	462 aa		18.8	■□□□□ 0.6
SYNRG-222	ENST00000614941	NCKAP5L	Q9HCH0	1330 aa		18.8	■□□□□ 0.6
SYNRG-222	ENST00000614941	ST5	P78524	1137 aa		18.79	■□□□□ 0.6
SYNRG-222	ENST00000614941	CCZ1B	P86790	482 aa		18.79	■□□□□ 0.6
SYNRG-222	ENST00000614941	CCZ1	P86791	482 aa	Predicted RBP	18.79	■□□□□ 0.6
SYNRG-222	ENST00000614941	ATP8B2	P98198	1209 aa		18.79	■□□□□ 0.6
SYNRG-222	ENST00000614941	LEO1	Q8WVC0	666 aa	Predicted RBP	18.79	■□□□□ 0.6
SYNRG-222	ENST00000614941	DDX11	Q96FC9	970 aa		18.79	■□□□□ 0.6
SYNRG-222	ENST00000614941	PGBD1	Q96JS3	809 aa		18.78	■□□□□ 0.6
SYNRG-222	ENST00000614941	RSPH14	Q9UHP6	348 aa		18.78	■□□□□ 0.6
SYNRG-222	ENST00000614941	BECN2	A8MW95	431 aa		18.78	■□□□□ 0.6
SYNRG-222	ENST00000614941	TRIM66	O15016	1216 aa		18.78	■□□□□ 0.6
SYNRG-222	ENST00000614941	SOX12	O15370	315 aa		18.78	■□□□□ 0.6
SYNRG-222	ENST00000614941	SEC31A	O94979	1220 aa	Known RBP	18.78	■□□□□ 0.6
SYNRG-222	ENST00000614941	CYP46A1	Q9Y6A2	500 aa		18.78	■□□□□ 0.6
SYNRG-222	ENST00000614941	POGZ	Q7Z3K3	1410 aa		18.78	■□□□□ 0.6
SYNRG-222	ENST00000614941	LARP1	Q6PKG0	1096 aa	Known RBP	18.78	■□□□□ 0.6
SYNRG-222	ENST00000614941	C10orf67	Q8IYJ2	551 aa		18.78	■□□□□ 0.6
SYNRG-222	ENST00000614941	DDX19A	Q9NUU7	478 aa	Known RBP	18.78	■□□□□ 0.6
SYNRG-222	ENST00000614941	FOXO3	O43524	673 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms