RNA–Protein interactions for RNA: ENST00000614640.4

MSRB3-212, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MSRB3, Length 4,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-212ENST00000614640 DNAAF4Q8WXU2 420 aa11.1□□□□□ -0.63
MSRB3-212ENST00000614640 TRPM3Q9HCF6 1732 aaPredicted RBP11.1□□□□□ -0.63
MSRB3-212ENST00000614640 SURF6O75683 361 aaKnown RBP11.1□□□□□ -0.63
MSRB3-212ENST00000614640 CUL4AQ13619 759 aa11.1□□□□□ -0.63
MSRB3-212ENST00000614640 FMNL2Q96PY5 1086 aa11.1□□□□□ -0.63
MSRB3-212ENST00000614640 SLC52A2Q9HAB3 445 aa11.1□□□□□ -0.63
MSRB3-212ENST00000614640 ANO2Q9NQ90 1003 aa11.1□□□□□ -0.63
MSRB3-212ENST00000614640 HEG1Q9ULI3 1381 aa11.1□□□□□ -0.63
MSRB3-212ENST00000614640 SRGAP3O43295 1099 aa11.1□□□□□ -0.63
MSRB3-212ENST00000614640 RAB11FIP3O75154 756 aa11.1□□□□□ -0.63
MSRB3-212ENST00000614640 ANAPC15P60006 121 aa11.1□□□□□ -0.63
MSRB3-212ENST00000614640 LARP1Q6PKG0 1096 aaKnown RBP11.09□□□□□ -0.63
MSRB3-212ENST00000614640 ADAMTS7Q9UKP4 1686 aa11.09□□□□□ -0.63
MSRB3-212ENST00000614640 RGPD5Q99666 1765 aa11.09□□□□□ -0.63
MSRB3-212ENST00000614640 NEXNQ0ZGT2 675 aa11.09□□□□□ -0.63
MSRB3-212ENST00000614640 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
MSRB3-212ENST00000614640 ABCC6O95255 1503 aa11.09□□□□□ -0.63
MSRB3-212ENST00000614640 MAP4K4O95819 1239 aaPredicted RBP11.09□□□□□ -0.63
MSRB3-212ENST00000614640 PROSER3Q2NL68 480 aa11.09□□□□□ -0.63
MSRB3-212ENST00000614640 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
MSRB3-212ENST00000614640 GPT2Q8TD30 523 aa11.09□□□□□ -0.63
MSRB3-212ENST00000614640 PRAMEF22A3QJZ6 481 aa11.08□□□□□ -0.64
MSRB3-212ENST00000614640 HYPKQ9NX55 129 aa11.08□□□□□ -0.64
MSRB3-212ENST00000614640 TMOD3Q9NYL9 352 aa11.08□□□□□ -0.64
MSRB3-212ENST00000614640 NGLY1Q96IV0 654 aa11.08□□□□□ -0.64
MSRB3-212ENST00000614640 OVOS2A0A0G2JMS6 1433 aa11.08□□□□□ -0.64
MSRB3-212ENST00000614640 SNRPA1P09661 255 aaKnown RBP11.08□□□□□ -0.64
MSRB3-212ENST00000614640 HSPA4P34932 840 aa11.08□□□□□ -0.64
MSRB3-212ENST00000614640 ZNF445P59923 1031 aa11.08□□□□□ -0.64
MSRB3-212ENST00000614640 ZNF790Q6PG37 636 aa11.07□□□□□ -0.64
MSRB3-212ENST00000614640 KIF1BPQ96EK5 621 aa11.07□□□□□ -0.64
MSRB3-212ENST00000614640 ERVV-2B6SEH9 535 aa11.07□□□□□ -0.64
MSRB3-212ENST00000614640 GIGYF1O75420 1035 aaPredicted RBP11.07□□□□□ -0.64
MSRB3-212ENST00000614640 MCM2P49736 904 aa11.07□□□□□ -0.64
MSRB3-212ENST00000614640 UPF3BQ9BZI7 483 aaKnown RBP11.07□□□□□ -0.64
MSRB3-212ENST00000614640 PRPF40AO75400 957 aaKnown RBP11.07□□□□□ -0.64
MSRB3-212ENST00000614640 MTX1Q13505 466 aa11.07□□□□□ -0.64
MSRB3-212ENST00000614640 ZSCAN23Q3MJ62 389 aa11.07□□□□□ -0.64
MSRB3-212ENST00000614640 CAVIN1Q6NZI2 390 aaKnown RBP11.07□□□□□ -0.64
MSRB3-212ENST00000614640 USP42Q9H9J4 1324 aaKnown RBP11.07□□□□□ -0.64
MSRB3-212ENST00000614640 BRD1O95696 1058 aa11.06□□□□□ -0.64
MSRB3-212ENST00000614640 MCCP23508 829 aa11.06□□□□□ -0.64
MSRB3-212ENST00000614640 SYTL4Q96C24 671 aaPredicted RBP11.06□□□□□ -0.64
MSRB3-212ENST00000614640 NSFL1CQ9UNZ2 370 aaKnown RBP11.06□□□□□ -0.64
MSRB3-212ENST00000614640 SGSM2O43147 1006 aa11.06□□□□□ -0.64
MSRB3-212ENST00000614640 EPB41L2O43491 1005 aaKnown RBP11.06□□□□□ -0.64
MSRB3-212ENST00000614640 CLCN1P35523 988 aa11.06□□□□□ -0.64
MSRB3-212ENST00000614640 RIC3Q7Z5B4 369 aa11.06□□□□□ -0.64
MSRB3-212ENST00000614640 ALS2Q96Q42 1657 aa11.06□□□□□ -0.64
MSRB3-212ENST00000614640 INTS4Q96HW7 963 aaKnown RBP11.06□□□□□ -0.64
MSRB3-212ENST00000614640 NOL8Q76FK4 1167 aaKnown RBP11.05□□□□□ -0.64
MSRB3-212ENST00000614640 LSG1Q9H089 658 aaKnown RBP11.05□□□□□ -0.64
MSRB3-212ENST00000614640 C9orf78Q9NZ63 289 aaPredicted RBP11.05□□□□□ -0.64
MSRB3-212ENST00000614640 MAP3K2Q9Y2U5 619 aa11.05□□□□□ -0.64
MSRB3-212ENST00000614640 RAD50Q92878 1312 aa11.05□□□□□ -0.64
MSRB3-212ENST00000614640 SLC39A6Q13433 755 aa11.05□□□□□ -0.64
MSRB3-212ENST00000614640 RBM27Q9P2N5 1060 aaKnown RBP11.05□□□□□ -0.64
MSRB3-212ENST00000614640 FOXD4L5Q5VV16 416 aaPredicted RBP11.05□□□□□ -0.64
MSRB3-212ENST00000614640 FOXD4L4Q8WXT5 416 aaPredicted RBP11.05□□□□□ -0.64
MSRB3-212ENST00000614640 TEX13AQ9BXU3 409 aaPredicted RBP11.05□□□□□ -0.64
MSRB3-212ENST00000614640 C5P01031 1676 aa11.05□□□□□ -0.64
MSRB3-212ENST00000614640 AIMP1Q12904 312 aaKnown RBP11.04□□□□□ -0.64
MSRB3-212ENST00000614640 CWF19L2Q2TBE0 894 aaKnown RBP11.04□□□□□ -0.64
MSRB3-212ENST00000614640 KAZALD1Q96I82 304 aa11.04□□□□□ -0.64
MSRB3-212ENST00000614640 PPP1R9BQ96SB3 815 aa11.04□□□□□ -0.64
MSRB3-212ENST00000614640 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.04□□□□□ -0.64
MSRB3-212ENST00000614640 NASPP49321 788 aaPredicted RBP11.04□□□□□ -0.64
MSRB3-212ENST00000614640 CYP27B1O15528 508 aa11.04□□□□□ -0.64
MSRB3-212ENST00000614640 DDB1Q16531 1140 aa11.04□□□□□ -0.64
MSRB3-212ENST00000614640 KSR2Q6VAB6 950 aa11.04□□□□□ -0.64
MSRB3-212ENST00000614640 RASEFQ8IZ41 740 aa11.04□□□□□ -0.64
MSRB3-212ENST00000614640 TMEM63CQ9P1W3 806 aa11.04□□□□□ -0.64
MSRB3-212ENST00000614640 THRAP3Q9Y2W1 955 aaKnown RBP11.04□□□□□ -0.64
MSRB3-212ENST00000614640 SNX14Q9Y5W7 946 aa11.04□□□□□ -0.64
MSRB3-212ENST00000614640 PDIA6Q15084 440 aa11.04□□□□□ -0.64
MSRB3-212ENST00000614640 TTC14Q96N46 770 aa11.04□□□□□ -0.64
MSRB3-212ENST00000614640 ESPNB1AK53 854 aa11.03□□□□□ -0.64
MSRB3-212ENST00000614640 NCLP19338 710 aaKnown RBP11.03□□□□□ -0.64
MSRB3-212ENST00000614640 CERKQ8TCT0 537 aa11.03□□□□□ -0.64
MSRB3-212ENST00000614640 PA2G4Q9UQ80 394 aaKnown RBP11.03□□□□□ -0.64
MSRB3-212ENST00000614640 SCN11AQ9UI33 1791 aa11.03□□□□□ -0.64
MSRB3-212ENST00000614640 ALDH1L1O75891 902 aa11.03□□□□□ -0.64
MSRB3-212ENST00000614640 C8orf37Q96NL8 207 aa11.03□□□□□ -0.64
MSRB3-212ENST00000614640 RBSNQ9H1K0 784 aa11.03□□□□□ -0.64
MSRB3-212ENST00000614640 DDX21Q9NR30 783 aaKnown RBP eCLIP11.03□□□□□ -0.64
MSRB3-212ENST00000614640 COL5A2P05997 1499 aaPredicted RBP11.03□□□□□ -0.64
MSRB3-212ENST00000614640 TTC41PQ6P2S7 1318 aa11.03□□□□□ -0.64
MSRB3-212ENST00000614640 PRIM1P49642 420 aaKnown RBP11.03□□□□□ -0.64
MSRB3-212ENST00000614640 CNTROBQ8N137 903 aa11.03□□□□□ -0.64
MSRB3-212ENST00000614640 MYL6BP14649 208 aa11.02□□□□□ -0.64
MSRB3-212ENST00000614640 OS9Q13438 667 aaPredicted RBP11.02□□□□□ -0.64
MSRB3-212ENST00000614640 TCHHQ07283 1943 aa11.02□□□□□ -0.65
MSRB3-212ENST00000614640 JCADQ9P266 1359 aa11.02□□□□□ -0.65
MSRB3-212ENST00000614640 UTYO14607 1347 aa11.02□□□□□ -0.65
MSRB3-212ENST00000614640 HSP90AB4PQ58FF6 505 aa11.02□□□□□ -0.65
MSRB3-212ENST00000614640 CWC27Q6UX04 472 aaKnown RBP11.02□□□□□ -0.65
MSRB3-212ENST00000614640 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
MSRB3-212ENST00000614640 RPAP1Q9BWH6 1393 aaPredicted RBP11.02□□□□□ -0.65
MSRB3-212ENST00000614640 PTCD1O75127 700 aaKnown RBP11.02□□□□□ -0.65
MSRB3-212ENST00000614640 STARD3NLO95772 234 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms