RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 STYK1Q6J9G0 422 aa23.77■■□□□ 1.4
SMN2-213ENST00000614240 NBPF5PQ86XG9 351 aaPredicted RBP23.77■■□□□ 1.4
SMN2-213ENST00000614240 WDR90Q96KV7 1748 aa23.76■■□□□ 1.39
SMN2-213ENST00000614240 NEFMP07197 916 aa23.76■■□□□ 1.39
SMN2-213ENST00000614240 HTATSF1O43719 755 aaKnown RBP23.75■■□□□ 1.39
SMN2-213ENST00000614240 SRGNP10124 158 aa23.75■■□□□ 1.39
SMN2-213ENST00000614240 CLEC4GQ6UXB4 293 aa23.75■■□□□ 1.39
SMN2-213ENST00000614240 MASTLQ96GX5 879 aa23.75■■□□□ 1.39
SMN2-213ENST00000614240 TAOK3Q9H2K8 898 aa23.75■■□□□ 1.39
SMN2-213ENST00000614240 SOGA3Q5TF21 947 aa23.74■■□□□ 1.39
SMN2-213ENST00000614240 PRPF40BQ6NWY9 871 aaKnown RBP23.74■■□□□ 1.39
SMN2-213ENST00000614240 ANKRD31Q8N7Z5 1873 aa23.73■■□□□ 1.39
SMN2-213ENST00000614240 TAF7Q15545 349 aaPredicted RBP23.73■■□□□ 1.39
SMN2-213ENST00000614240 LTBP3Q9NS15 1303 aa23.71■■□□□ 1.39
SMN2-213ENST00000614240 TPTE2Q6XPS3 522 aa23.71■■□□□ 1.39
SMN2-213ENST00000614240 NIP7Q9Y221 180 aaKnown RBP eCLIP23.71■■□□□ 1.39
SMN2-213ENST00000614240 FAM177BA6PVY3 158 aa23.7■■□□□ 1.38
SMN2-213ENST00000614240 NBPF26B4DH59 902 aa23.7■■□□□ 1.38
SMN2-213ENST00000614240 NBPF10Q6P3W6 841 aaKnown RBP23.7■■□□□ 1.38
SMN2-213ENST00000614240 NBPF15Q8N660 670 aa23.7■■□□□ 1.38
SMN2-213ENST00000614240 JMYQ8N9B5 988 aa23.7■■□□□ 1.38
SMN2-213ENST00000614240 MIS18AQ9NYP9 233 aa23.7■■□□□ 1.38
SMN2-213ENST00000614240 TIAM2Q8IVF5 1701 aa23.7■■□□□ 1.38
SMN2-213ENST00000614240 COL11A2P13942 1736 aaPredicted RBP23.68■■□□□ 1.38
SMN2-213ENST00000614240 POTECB2RU33 542 aa23.68■■□□□ 1.38
SMN2-213ENST00000614240 NPR1P16066 1061 aa23.68■■□□□ 1.38
SMN2-213ENST00000614240 GTF2E1P29083 439 aaPredicted RBP23.68■■□□□ 1.38
SMN2-213ENST00000614240 CCDC88AQ3V6T2 1871 aa23.68■■□□□ 1.38
SMN2-213ENST00000614240 NGEFQ8N5V2 710 aa23.67■■□□□ 1.38
SMN2-213ENST00000614240 BCORQ6W2J9 1755 aa23.66■■□□□ 1.38
SMN2-213ENST00000614240 RGL2O15211 777 aa23.66■■□□□ 1.38
SMN2-213ENST00000614240 DDNO94850 711 aaPredicted RBP23.66■■□□□ 1.38
SMN2-213ENST00000614240 CCDC93Q567U6 631 aa23.66■■□□□ 1.38
SMN2-213ENST00000614240 PNISRQ8TF01 805 aaKnown RBP23.66■■□□□ 1.38
SMN2-213ENST00000614240 SLX4Q8IY92 1834 aa23.64■■□□□ 1.38
SMN2-213ENST00000614240 HLFQ16534 295 aa23.64■■□□□ 1.37
SMN2-213ENST00000614240 FER1L6Q2WGJ9 1857 aa23.63■■□□□ 1.37
SMN2-213ENST00000614240 CHADLQ6NUI6 762 aa23.62■■□□□ 1.37
SMN2-213ENST00000614240 C7orf43Q8WVR3 580 aa23.62■■□□□ 1.37
SMN2-213ENST00000614240 RRP7AQ9Y3A4 280 aaKnown RBP23.62■■□□□ 1.37
SMN2-213ENST00000614240 KLRG2A4D1S0 409 aaPredicted RBP23.61■■□□□ 1.37
SMN2-213ENST00000614240 ALDH1B1P30837 517 aa23.61■■□□□ 1.37
SMN2-213ENST00000614240 FKBP4Q02790 459 aaKnown RBP eCLIP23.61■■□□□ 1.37
SMN2-213ENST00000614240 PNNQ9H307 717 aaKnown RBP23.61■■□□□ 1.37
SMN2-213ENST00000614240 IQCA1LA6NCM1 817 aa23.6■■□□□ 1.37
SMN2-213ENST00000614240 KIF6Q6ZMV9 814 aa23.6■■□□□ 1.37
SMN2-213ENST00000614240 RTKN2Q8IZC4 609 aa23.6■■□□□ 1.37
SMN2-213ENST00000614240 NYXQ9GZU5 481 aa23.6■■□□□ 1.37
SMN2-213ENST00000614240 ZNF277Q9NRM2 450 aaPredicted RBP23.6■■□□□ 1.37
SMN2-213ENST00000614240 MAPK8IP3Q9UPT6 1336 aa23.59■■□□□ 1.37
SMN2-213ENST00000614240 NFE2L2Q16236 605 aa23.59■■□□□ 1.37
SMN2-213ENST00000614240 THUMPD2Q9BTF0 503 aaKnown RBP23.59■■□□□ 1.37
SMN2-213ENST00000614240 DICER1Q9UPY3 1922 aaKnown RBP23.59■■□□□ 1.37
SMN2-213ENST00000614240 CACNA1SQ13698 1873 aa23.58■■□□□ 1.37
SMN2-213ENST00000614240 ERVV-1B6SEH8 477 aa23.58■■□□□ 1.37
SMN2-213ENST00000614240 MYL6BP14649 208 aa23.58■■□□□ 1.37
SMN2-213ENST00000614240 EIF4A1P60842 406 aaKnown RBP23.58■■□□□ 1.37
SMN2-213ENST00000614240 COL13A1Q5TAT6 717 aaPredicted RBP23.58■■□□□ 1.37
SMN2-213ENST00000614240 OLFM4Q6UX06 510 aa23.58■■□□□ 1.37
SMN2-213ENST00000614240 PLEKHF1Q96S99 279 aa23.58■■□□□ 1.37
SMN2-213ENST00000614240 MAP3K15Q6ZN16 1313 aa23.57■■□□□ 1.36
SMN2-213ENST00000614240 POTEIP0CG38 1075 aa23.56■■□□□ 1.36
SMN2-213ENST00000614240 POTEJP0CG39 1038 aa23.56■■□□□ 1.36
SMN2-213ENST00000614240 NUTM1Q86Y26 1132 aa23.56■■□□□ 1.36
SMN2-213ENST00000614240 SYNE4Q8N205 404 aa23.55■■□□□ 1.36
SMN2-213ENST00000614240 L3MBTL3Q96JM7 780 aaPredicted RBP23.55■■□□□ 1.36
SMN2-213ENST00000614240 ZBTB3Q9H5J0 574 aa23.55■■□□□ 1.36
SMN2-213ENST00000614240 ARFGEF2Q9Y6D5 1785 aa23.55■■□□□ 1.36
SMN2-213ENST00000614240 GPTP24298 496 aa23.54■■□□□ 1.36
SMN2-213ENST00000614240 TTLL7Q6ZT98 887 aa23.54■■□□□ 1.36
SMN2-213ENST00000614240 LDHDQ86WU2 507 aa23.54■■□□□ 1.36
SMN2-213ENST00000614240 RPGRQ92834 1020 aaKnown RBP23.54■■□□□ 1.36
SMN2-213ENST00000614240 TAF1DQ9H5J8 278 aaPredicted RBP23.54■■□□□ 1.36
SMN2-213ENST00000614240 CREBZFQ9NS37 354 aa23.54■■□□□ 1.36
SMN2-213ENST00000614240 HSPA1AP0DMV8 641 aaKnown RBP23.53■■□□□ 1.36
SMN2-213ENST00000614240 HSPA1BP0DMV9 641 aaKnown RBP23.53■■□□□ 1.36
SMN2-213ENST00000614240 IARSP41252 1262 aaKnown RBP23.53■■□□□ 1.36
SMN2-213ENST00000614240 EAPPQ56P03 285 aaPredicted RBP23.53■■□□□ 1.36
SMN2-213ENST00000614240 ZNF541Q9H0D2 1346 aa23.53■■□□□ 1.36
SMN2-213ENST00000614240 TNS4Q8IZW8 715 aa23.52■■□□□ 1.36
SMN2-213ENST00000614240 MKRN1Q9UHC7 482 aaKnown RBP23.52■■□□□ 1.36
SMN2-213ENST00000614240 HACL1Q9UJ83 578 aa23.52■■□□□ 1.36
SMN2-213ENST00000614240 CLEC11AQ9Y240 323 aa23.52■■□□□ 1.36
SMN2-213ENST00000614240 LAMB4A4D0S4 1761 aa23.51■■□□□ 1.35
SMN2-213ENST00000614240 CRY2Q49AN0 593 aa23.51■■□□□ 1.35
SMN2-213ENST00000614240 JDP2Q8WYK2 163 aa23.51■■□□□ 1.35
SMN2-213ENST00000614240 TSPYL4Q9UJ04 414 aa23.51■■□□□ 1.35
SMN2-213ENST00000614240 ABCC12Q96J65 1359 aa23.51■■□□□ 1.35
SMN2-213ENST00000614240 SUSD4Q5VX71 490 aa23.5■■□□□ 1.35
SMN2-213ENST00000614240 CC2D2BQ6DHV5 1058 aa23.5■■□□□ 1.35
SMN2-213ENST00000614240 RBM17Q96I25 401 aaKnown RBP23.49■■□□□ 1.35
SMN2-213ENST00000614240 CAPN15O75808 1086 aa23.48■■□□□ 1.35
SMN2-213ENST00000614240 EIF2S2P20042 333 aaKnown RBP23.48■■□□□ 1.35
SMN2-213ENST00000614240 EPHX2P34913 555 aa23.48■■□□□ 1.35
SMN2-213ENST00000614240 RIPK4P57078 832 aa23.48■■□□□ 1.35
SMN2-213ENST00000614240 PPP1R42Q7Z4L9 355 aa23.48■■□□□ 1.35
SMN2-213ENST00000614240 PSMD1Q99460 953 aa23.48■■□□□ 1.35
SMN2-213ENST00000614240 DLG5Q8TDM6 1919 aa23.48■■□□□ 1.35
SMN2-213ENST00000614240 ERBB4Q15303 1308 aa23.48■■□□□ 1.35
SMN2-213ENST00000614240 KDM3BQ7LBC6 1761 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms