RNA–Protein interactions for RNA: ENST00000614090.1

PTPN20CP-201, Transcript of protein tyrosine phosphatase, non-receptor type 20C, pseudogene, humanhuman

BASIC

Gene PTPN20CP, Length 920 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20CP-201ENST00000614090 TBC1D9BQ66K14 1250 aa17.34■□□□□ 0.37
PTPN20CP-201ENST00000614090 GPR101Q96P66 508 aaPredicted RBP17.34■□□□□ 0.37
PTPN20CP-201ENST00000614090 SLC52A2Q9HAB3 445 aa17.34■□□□□ 0.37
PTPN20CP-201ENST00000614090 RNF123Q5XPI4 1314 aa17.33■□□□□ 0.36
PTPN20CP-201ENST00000614090 A0A087WZG4 1122 aa17.33■□□□□ 0.36
PTPN20CP-201ENST00000614090 SRGNP10124 158 aa17.33■□□□□ 0.36
PTPN20CP-201ENST00000614090 PAXIP1Q6ZW49 1069 aaPredicted RBP17.33■□□□□ 0.36
PTPN20CP-201ENST00000614090 CA12O43570 354 aa17.32■□□□□ 0.36
PTPN20CP-201ENST00000614090 CCDC93Q567U6 631 aa17.32■□□□□ 0.36
PTPN20CP-201ENST00000614090 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
PTPN20CP-201ENST00000614090 VSIG10Q8N0Z9 540 aa17.32■□□□□ 0.36
PTPN20CP-201ENST00000614090 CCDC24Q8N4L8 307 aa17.32■□□□□ 0.36
PTPN20CP-201ENST00000614090 MASTLQ96GX5 879 aa17.32■□□□□ 0.36
PTPN20CP-201ENST00000614090 TSKSQ9UJT2 592 aa17.32■□□□□ 0.36
PTPN20CP-201ENST00000614090 BCORQ6W2J9 1755 aa17.32■□□□□ 0.36
PTPN20CP-201ENST00000614090 MAP2K2P36507 400 aa17.31■□□□□ 0.36
PTPN20CP-201ENST00000614090 EIF5P55010 431 aaKnown RBP17.31■□□□□ 0.36
PTPN20CP-201ENST00000614090 FKBP4Q02790 459 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTPN20CP-201ENST00000614090 AEBP1Q8IUX7 1158 aa17.31■□□□□ 0.36
PTPN20CP-201ENST00000614090 CNBD1Q8NA66 436 aa17.31■□□□□ 0.36
PTPN20CP-201ENST00000614090 CANXP27824 592 aaKnown RBP17.3■□□□□ 0.36
PTPN20CP-201ENST00000614090 GRM1Q13255 1194 aa17.3■□□□□ 0.36
PTPN20CP-201ENST00000614090 SLC39A6Q13433 755 aa17.3■□□□□ 0.36
PTPN20CP-201ENST00000614090 C7orf43Q8WVR3 580 aa17.3■□□□□ 0.36
PTPN20CP-201ENST00000614090 TNNT2P45379 298 aaPredicted RBP17.29■□□□□ 0.36
PTPN20CP-201ENST00000614090 ST5P78524 1137 aa17.29■□□□□ 0.36
PTPN20CP-201ENST00000614090 AKAP4Q5JQC9 854 aa17.29■□□□□ 0.36
PTPN20CP-201ENST00000614090 GPC2Q8N158 579 aa17.29■□□□□ 0.36
PTPN20CP-201ENST00000614090 ZNF277Q9NRM2 450 aaPredicted RBP17.29■□□□□ 0.36
PTPN20CP-201ENST00000614090 FZD9O00144 591 aa17.28■□□□□ 0.36
PTPN20CP-201ENST00000614090 DGKZQ13574 1117 aa17.28■□□□□ 0.36
PTPN20CP-201ENST00000614090 TLL2Q9Y6L7 1015 aa17.28■□□□□ 0.36
PTPN20CP-201ENST00000614090 NPHP1O15259 732 aa17.27■□□□□ 0.36
PTPN20CP-201ENST00000614090 PRPF38BQ5VTL8 546 aaKnown RBP17.27■□□□□ 0.36
PTPN20CP-201ENST00000614090 AOC2O75106 756 aa17.26■□□□□ 0.35
PTPN20CP-201ENST00000614090 STARD3NLO95772 234 aa17.26■□□□□ 0.35
PTPN20CP-201ENST00000614090 SETDB2Q96T68 719 aa17.26■□□□□ 0.35
PTPN20CP-201ENST00000614090 IARSP41252 1262 aaKnown RBP17.25■□□□□ 0.35
PTPN20CP-201ENST00000614090 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
PTPN20CP-201ENST00000614090 FMR1Q06787 632 aaKnown RBP eCLIP17.25■□□□□ 0.35
PTPN20CP-201ENST00000614090 SULT6B1Q6IMI4 303 aa17.25■□□□□ 0.35
PTPN20CP-201ENST00000614090 RTKN2Q8IZC4 609 aa17.25■□□□□ 0.35
PTPN20CP-201ENST00000614090 LGR6Q9HBX8 967 aa17.25■□□□□ 0.35
PTPN20CP-201ENST00000614090 RNMTO43148 476 aaKnown RBP17.24■□□□□ 0.35
PTPN20CP-201ENST00000614090 CST9Q5W186 159 aa17.24■□□□□ 0.35
PTPN20CP-201ENST00000614090 NPR1P16066 1061 aa17.23■□□□□ 0.35
PTPN20CP-201ENST00000614090 LMOD1P29536 600 aaPredicted RBP17.23■□□□□ 0.35
PTPN20CP-201ENST00000614090 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
PTPN20CP-201ENST00000614090 HHIPL1Q96JK4 782 aa17.22■□□□□ 0.35
PTPN20CP-201ENST00000614090 TRAF5O00463 557 aa17.21■□□□□ 0.35
PTPN20CP-201ENST00000614090 CAMTA2O94983 1202 aa17.21■□□□□ 0.35
PTPN20CP-201ENST00000614090 IL6STP40189 918 aaPredicted RBP17.21■□□□□ 0.35
PTPN20CP-201ENST00000614090 SAPCD2Q86UD0 394 aa17.21■□□□□ 0.35
PTPN20CP-201ENST00000614090 JDP2Q8WYK2 163 aa17.21■□□□□ 0.35
PTPN20CP-201ENST00000614090 ZNF330Q9Y3S2 320 aaPredicted RBP17.21■□□□□ 0.35
PTPN20CP-201ENST00000614090 SNED1Q8TER0 1413 aa17.21■□□□□ 0.34
PTPN20CP-201ENST00000614090 COL4A5P29400 1685 aa17.2■□□□□ 0.34
PTPN20CP-201ENST00000614090 EIF6P56537 245 aaKnown RBP17.2■□□□□ 0.34
PTPN20CP-201ENST00000614090 SOX10P56693 466 aa17.2■□□□□ 0.34
PTPN20CP-201ENST00000614090 OLFM4Q6UX06 510 aa17.2■□□□□ 0.34
PTPN20CP-201ENST00000614090 USP50Q70EL3 339 aaPredicted RBP17.2■□□□□ 0.34
PTPN20CP-201ENST00000614090 TTC5Q8N0Z6 440 aa17.2■□□□□ 0.34
PTPN20CP-201ENST00000614090 SYNE4Q8N205 404 aa17.2■□□□□ 0.34
PTPN20CP-201ENST00000614090 SIPA1L3O60292 1781 aaPredicted RBP17.2■□□□□ 0.34
PTPN20CP-201ENST00000614090 KLRG2A4D1S0 409 aaPredicted RBP17.19■□□□□ 0.34
PTPN20CP-201ENST00000614090 SCNN1DP51172 638 aa17.19■□□□□ 0.34
PTPN20CP-201ENST00000614090 PSMD1Q99460 953 aa17.19■□□□□ 0.34
PTPN20CP-201ENST00000614090 TEX13AQ9BXU3 409 aaPredicted RBP17.19■□□□□ 0.34
PTPN20CP-201ENST00000614090 GJA3Q9Y6H8 435 aa17.19■□□□□ 0.34
PTPN20CP-201ENST00000614090 HEG1Q9ULI3 1381 aa17.18■□□□□ 0.34
PTPN20CP-201ENST00000614090 EPS15P42566 896 aa17.18■□□□□ 0.34
PTPN20CP-201ENST00000614090 NPM2Q86SE8 214 aaKnown RBP17.18■□□□□ 0.34
PTPN20CP-201ENST00000614090 NBPF5PQ86XG9 351 aaPredicted RBP17.18■□□□□ 0.34
PTPN20CP-201ENST00000614090 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
PTPN20CP-201ENST00000614090 AKAP11Q9UKA4 1901 aa17.17■□□□□ 0.34
PTPN20CP-201ENST00000614090 CELF2O95319 508 aaKnown RBP17.16■□□□□ 0.34
PTPN20CP-201ENST00000614090 IL13P35225 146 aa17.16■□□□□ 0.34
PTPN20CP-201ENST00000614090 ALDH1B1P30837 517 aa17.15■□□□□ 0.34
PTPN20CP-201ENST00000614090 ZNF496Q96IT1 587 aaPredicted RBP17.15■□□□□ 0.34
PTPN20CP-201ENST00000614090 NOGQ13253 232 aa17.14■□□□□ 0.33
PTPN20CP-201ENST00000614090 CLEC4GQ6UXB4 293 aa17.14■□□□□ 0.33
PTPN20CP-201ENST00000614090 DZIP3Q86Y13 1208 aaKnown RBP17.14■□□□□ 0.33
PTPN20CP-201ENST00000614090 CC2D2BQ6DHV5 1058 aa17.12■□□□□ 0.33
PTPN20CP-201ENST00000614090 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
PTPN20CP-201ENST00000614090 ADARB2Q9NS39 739 aaKnown RBP17.12■□□□□ 0.33
PTPN20CP-201ENST00000614090 ZNF652Q9Y2D9 606 aa17.12■□□□□ 0.33
PTPN20CP-201ENST00000614090 A1BGP04217 495 aa17.11■□□□□ 0.33
PTPN20CP-201ENST00000614090 TPTE2Q6XPS3 522 aa17.11■□□□□ 0.33
PTPN20CP-201ENST00000614090 GCC1Q96CN9 775 aa17.11■□□□□ 0.33
PTPN20CP-201ENST00000614090 SAGE1Q9NXZ1 904 aa17.11■□□□□ 0.33
PTPN20CP-201ENST00000614090 MTHFSDQ2M296 383 aaKnown RBP17.1■□□□□ 0.33
PTPN20CP-201ENST00000614090 LARGE2Q8N3Y3 721 aa17.1■□□□□ 0.33
PTPN20CP-201ENST00000614090 GPRC5DQ9NZD1 345 aa17.1■□□□□ 0.33
PTPN20CP-201ENST00000614090 GRIPAP1Q4V328 841 aa17.09■□□□□ 0.33
PTPN20CP-201ENST00000614090 MORC1Q86VD1 984 aa17.09■□□□□ 0.33
PTPN20CP-201ENST00000614090 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
PTPN20CP-201ENST00000614090 ZIC5Q96T25 663 aa17.09■□□□□ 0.33
PTPN20CP-201ENST00000614090 GLIS2Q9BZE0 524 aaPredicted RBP17.09■□□□□ 0.33
PTPN20CP-201ENST00000614090 RGL2O15211 777 aa17.08■□□□□ 0.32
PTPN20CP-201ENST00000614090 HMOX1P09601 288 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms