RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 ARXQ96QS3 562 aa17.36■□□□□ 0.37
TMEM254-213ENST00000613758 METTL22Q9BUU2 404 aaPredicted RBP17.36■□□□□ 0.37
TMEM254-213ENST00000613758 LRRC4BQ9NT99 713 aa17.36■□□□□ 0.37
TMEM254-213ENST00000613758 CNTNAP4Q9C0A0 1308 aa17.36■□□□□ 0.37
TMEM254-213ENST00000613758 NEXNQ0ZGT2 675 aa17.35■□□□□ 0.37
TMEM254-213ENST00000613758 KIF6Q6ZMV9 814 aa17.35■□□□□ 0.37
TMEM254-213ENST00000613758 ZBTB3Q9H5J0 574 aa17.35■□□□□ 0.37
TMEM254-213ENST00000613758 ATP10DQ9P241 1426 aa17.35■□□□□ 0.37
TMEM254-213ENST00000613758 COL5A3P25940 1745 aaPredicted RBP17.35■□□□□ 0.37
TMEM254-213ENST00000613758 LINS1Q8NG48 757 aa17.35■□□□□ 0.37
TMEM254-213ENST00000613758 MYD88Q99836 296 aa17.35■□□□□ 0.37
TMEM254-213ENST00000613758 ALDH1L1O75891 902 aa17.34■□□□□ 0.37
TMEM254-213ENST00000613758 TXNRD1Q16881 649 aa17.34■□□□□ 0.37
TMEM254-213ENST00000613758 PROM2Q8N271 834 aa17.34■□□□□ 0.37
TMEM254-213ENST00000613758 MYH14Q7Z406 1995 aaKnown RBP17.34■□□□□ 0.37
TMEM254-213ENST00000613758 DZIP3Q86Y13 1208 aaKnown RBP17.33■□□□□ 0.37
TMEM254-213ENST00000613758 MEIS3Q99687 375 aa17.33■□□□□ 0.37
TMEM254-213ENST00000613758 RREB1Q92766 1687 aa17.33■□□□□ 0.36
TMEM254-213ENST00000613758 MAP3K15Q6ZN16 1313 aa17.33■□□□□ 0.36
TMEM254-213ENST00000613758 CWF19L2Q2TBE0 894 aaKnown RBP17.33■□□□□ 0.36
TMEM254-213ENST00000613758 TBC1D2BQ9UPU7 963 aa17.33■□□□□ 0.36
TMEM254-213ENST00000613758 RPS6KA4O75676 772 aa17.32■□□□□ 0.36
TMEM254-213ENST00000613758 IGKV5-2P06315 115 aa17.32■□□□□ 0.36
TMEM254-213ENST00000613758 USP44Q9H0E7 712 aa17.32■□□□□ 0.36
TMEM254-213ENST00000613758 PCDHB15Q9Y5E8 787 aa17.32■□□□□ 0.36
TMEM254-213ENST00000613758 KDM2BQ8NHM5 1336 aa17.31■□□□□ 0.36
TMEM254-213ENST00000613758 GNPATO15228 680 aa17.31■□□□□ 0.36
TMEM254-213ENST00000613758 GNAI3P08754 354 aa17.31■□□□□ 0.36
TMEM254-213ENST00000613758 HMGB2P26583 209 aaKnown RBP17.31■□□□□ 0.36
TMEM254-213ENST00000613758 A0A087WZG4 1122 aa17.3■□□□□ 0.36
TMEM254-213ENST00000613758 NEURL1BA8MQ27 555 aa17.3■□□□□ 0.36
TMEM254-213ENST00000613758 ERVV-1B6SEH8 477 aa17.3■□□□□ 0.36
TMEM254-213ENST00000613758 ATP5J2-PTCD1G3V325 749 aa17.3■□□□□ 0.36
TMEM254-213ENST00000613758 C1orf115Q9H7X2 142 aa17.3■□□□□ 0.36
TMEM254-213ENST00000613758 TAF1LQ8IZX4 1826 aa17.3■□□□□ 0.36
TMEM254-213ENST00000613758 GIGYF2Q6Y7W6 1299 aaKnown RBP17.3■□□□□ 0.36
TMEM254-213ENST00000613758 AK7Q96M32 723 aa17.3■□□□□ 0.36
TMEM254-213ENST00000613758 TSHZ2Q9NRE2 1034 aa17.3■□□□□ 0.36
TMEM254-213ENST00000613758 RTCBQ9Y3I0 505 aaKnown RBP17.3■□□□□ 0.36
TMEM254-213ENST00000613758 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
TMEM254-213ENST00000613758 COL15A1P39059 1388 aa17.3■□□□□ 0.36
TMEM254-213ENST00000613758 ARFGEF2Q9Y6D5 1785 aa17.29■□□□□ 0.36
TMEM254-213ENST00000613758 TCIRG1Q13488 830 aa17.29■□□□□ 0.36
TMEM254-213ENST00000613758 HLFQ16534 295 aa17.29■□□□□ 0.36
TMEM254-213ENST00000613758 C9orf78Q9NZ63 289 aaPredicted RBP17.29■□□□□ 0.36
TMEM254-213ENST00000613758 TNS1Q9HBL0 1735 aaKnown RBP17.29■□□□□ 0.36
TMEM254-213ENST00000613758 SMIM5Q71RC9 77 aa17.29■□□□□ 0.36
TMEM254-213ENST00000613758 EP400Q96L91 3159 aa17.29■□□□□ 0.36
TMEM254-213ENST00000613758 CAMTA2O94983 1202 aa17.28■□□□□ 0.36
TMEM254-213ENST00000613758 UBTFL1P0CB47 393 aaPredicted RBP17.28■□□□□ 0.36
TMEM254-213ENST00000613758 GCKRQ14397 625 aa17.28■□□□□ 0.36
TMEM254-213ENST00000613758 C4BP0C0L5 1744 aa17.28■□□□□ 0.36
TMEM254-213ENST00000613758 NUP188Q5SRE5 1749 aa17.28■□□□□ 0.36
TMEM254-213ENST00000613758 GNAI2P04899 355 aa17.28■□□□□ 0.36
TMEM254-213ENST00000613758 SF3B2Q13435 895 aaKnown RBP17.28■□□□□ 0.36
TMEM254-213ENST00000613758 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.36
TMEM254-213ENST00000613758 HSP90AB3PQ58FF7 597 aa17.27■□□□□ 0.36
TMEM254-213ENST00000613758 ISCA1Q9BUE6 129 aa17.27■□□□□ 0.36
TMEM254-213ENST00000613758 IBTKQ9P2D0 1353 aaPredicted RBP17.27■□□□□ 0.36
TMEM254-213ENST00000613758 GRM8O00222 908 aa17.26■□□□□ 0.35
TMEM254-213ENST00000613758 TRIM28Q13263 835 aaKnown RBP17.26■□□□□ 0.35
TMEM254-213ENST00000613758 IGHDP01880 384 aa17.26■□□□□ 0.35
TMEM254-213ENST00000613758 EN1Q05925 392 aaPredicted RBP17.26■□□□□ 0.35
TMEM254-213ENST00000613758 AMIGO3Q86WK7 504 aa17.26■□□□□ 0.35
TMEM254-213ENST00000613758 CCDC191Q8NCU4 936 aa17.26■□□□□ 0.35
TMEM254-213ENST00000613758 ARHGEF1Q92888 912 aaKnown RBP17.26■□□□□ 0.35
TMEM254-213ENST00000613758 RWDD1Q9H446 243 aaPredicted RBP17.26■□□□□ 0.35
TMEM254-213ENST00000613758 CWC25Q9NXE8 425 aaPredicted RBP17.26■□□□□ 0.35
TMEM254-213ENST00000613758 UTYO14607 1347 aa17.26■□□□□ 0.35
TMEM254-213ENST00000613758 TRAPPC3LQ5T215 181 aa17.25■□□□□ 0.35
TMEM254-213ENST00000613758 CAMKK2Q96RR4 588 aa17.25■□□□□ 0.35
TMEM254-213ENST00000613758 PHF14O94880 888 aa17.25■□□□□ 0.35
TMEM254-213ENST00000613758 CENPQQ7L2Z9 268 aaPredicted RBP17.25■□□□□ 0.35
TMEM254-213ENST00000613758 HDAC5Q9UQL6 1122 aa17.25■□□□□ 0.35
TMEM254-213ENST00000613758 LRRFIP2Q9Y608 721 aaKnown RBP17.25■□□□□ 0.35
TMEM254-213ENST00000613758 GPTP24298 496 aa17.24■□□□□ 0.35
TMEM254-213ENST00000613758 EZH2Q15910 746 aaKnown RBP17.24■□□□□ 0.35
TMEM254-213ENST00000613758 RPAP2Q8IXW5 612 aaPredicted RBP17.24■□□□□ 0.35
TMEM254-213ENST00000613758 NARFQ9UHQ1 456 aa17.24■□□□□ 0.35
TMEM254-213ENST00000613758 ADRA2BP18089 450 aa17.23■□□□□ 0.35
TMEM254-213ENST00000613758 BAG6P46379 1132 aa17.23■□□□□ 0.35
TMEM254-213ENST00000613758 HDAC1Q13547 482 aaPredicted RBP17.23■□□□□ 0.35
TMEM254-213ENST00000613758 ZNF652Q9Y2D9 606 aa17.23■□□□□ 0.35
TMEM254-213ENST00000613758 ZPR1O75312 459 aa17.23■□□□□ 0.35
TMEM254-213ENST00000613758 CEP85Q6P2H3 762 aa17.23■□□□□ 0.35
TMEM254-213ENST00000613758 CLEC4GQ6UXB4 293 aa17.23■□□□□ 0.35
TMEM254-213ENST00000613758 SIRT2Q8IXJ6 389 aa17.23■□□□□ 0.35
TMEM254-213ENST00000613758 ZNF34Q8IZ26 560 aa17.23■□□□□ 0.35
TMEM254-213ENST00000613758 ANKRD44Q8N8A2 993 aa17.23■□□□□ 0.35
TMEM254-213ENST00000613758 JARID2Q92833 1246 aaPredicted RBP17.23■□□□□ 0.35
TMEM254-213ENST00000613758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.22■□□□□ 0.35
TMEM254-213ENST00000613758 H7C1W4 665 aa17.22■□□□□ 0.35
TMEM254-213ENST00000613758 RFC4P35249 363 aa17.22■□□□□ 0.35
TMEM254-213ENST00000613758 USPL1Q5W0Q7 1092 aa17.22■□□□□ 0.35
TMEM254-213ENST00000613758 NLRP10Q86W26 655 aa17.22■□□□□ 0.35
TMEM254-213ENST00000613758 AKT1S1Q96B36 256 aa17.22■□□□□ 0.35
TMEM254-213ENST00000613758 SRP68Q9UHB9 627 aaKnown RBP17.22■□□□□ 0.35
TMEM254-213ENST00000613758 RGPD3A6NKT7 1758 aaPredicted RBP17.22■□□□□ 0.35
TMEM254-213ENST00000613758 RGPD4Q7Z3J3 1758 aa17.22■□□□□ 0.35
TMEM254-213ENST00000613758 RGL2O15211 777 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms