RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 AIMP1Q12904 312 aaKnown RBP17.02■□□□□ 0.32
MDC1-209ENST00000613547 COPS6Q7L5N1 327 aa17.02■□□□□ 0.32
MDC1-209ENST00000613547 LRP10Q7Z4F1 713 aa17.02■□□□□ 0.32
MDC1-209ENST00000613547 XAGE3Q8WTP9 111 aa17.02■□□□□ 0.32
MDC1-209ENST00000613547 ZNF428Q96B54 188 aa17.02■□□□□ 0.32
MDC1-209ENST00000613547 PARP3Q9Y6F1 533 aa17.02■□□□□ 0.32
MDC1-209ENST00000613547 TTLL7Q6ZT98 887 aa17.01■□□□□ 0.31
MDC1-209ENST00000613547 SGIP1Q9BQI5 828 aa17.01■□□□□ 0.31
MDC1-209ENST00000613547 ZBTB3Q9H5J0 574 aa17.01■□□□□ 0.31
MDC1-209ENST00000613547 BCL2L12Q9HB09 334 aa17.01■□□□□ 0.31
MDC1-209ENST00000613547 LRP5O75197 1615 aa17■□□□□ 0.31
MDC1-209ENST00000613547 DDX58O95786 925 aaKnown RBP17■□□□□ 0.31
MDC1-209ENST00000613547 SLC4A2P04920 1241 aa17■□□□□ 0.31
MDC1-209ENST00000613547 TCERG1O14776 1098 aaKnown RBP16.99■□□□□ 0.31
MDC1-209ENST00000613547 NFIXQ14938 502 aa16.99■□□□□ 0.31
MDC1-209ENST00000613547 BICDL1Q6ZP65 573 aa16.99■□□□□ 0.31
MDC1-209ENST00000613547 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
MDC1-209ENST00000613547 SETDB2Q96T68 719 aa16.99■□□□□ 0.31
MDC1-209ENST00000613547 SCN7AQ01118 1682 aa16.98■□□□□ 0.31
MDC1-209ENST00000613547 TM4SF1P30408 202 aa16.98■□□□□ 0.31
MDC1-209ENST00000613547 HSP90AB3PQ58FF7 597 aa16.98■□□□□ 0.31
MDC1-209ENST00000613547 GIGYF2Q6Y7W6 1299 aaKnown RBP16.98■□□□□ 0.31
MDC1-209ENST00000613547 ANKRD13DQ6ZTN6 518 aa16.98■□□□□ 0.31
MDC1-209ENST00000613547 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
MDC1-209ENST00000613547 TBC1D9BQ66K14 1250 aa16.97■□□□□ 0.31
MDC1-209ENST00000613547 NIP7Q9Y221 180 aaKnown RBP eCLIP16.97■□□□□ 0.31
MDC1-209ENST00000613547 CARMIL3Q8ND23 1372 aa16.97■□□□□ 0.31
MDC1-209ENST00000613547 NPHP1O15259 732 aa16.96■□□□□ 0.31
MDC1-209ENST00000613547 HLFQ16534 295 aa16.96■□□□□ 0.31
MDC1-209ENST00000613547 RIC3Q7Z5B4 369 aa16.96■□□□□ 0.31
MDC1-209ENST00000613547 KLHL34Q8N239 644 aa16.96■□□□□ 0.31
MDC1-209ENST00000613547 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.31
MDC1-209ENST00000613547 POLRMTO00411 1230 aaKnown RBP16.95■□□□□ 0.3
MDC1-209ENST00000613547 SERPINB2P05120 415 aa16.95■□□□□ 0.3
MDC1-209ENST00000613547 DDR1Q08345 913 aa16.95■□□□□ 0.3
MDC1-209ENST00000613547 FLIIQ13045 1269 aa16.95■□□□□ 0.3
MDC1-209ENST00000613547 ALDH1L2Q3SY69 923 aa16.95■□□□□ 0.3
MDC1-209ENST00000613547 ATP10DQ9P241 1426 aa16.95■□□□□ 0.3
MDC1-209ENST00000613547 COL24A1Q17RW2 1714 aa16.94■□□□□ 0.3
MDC1-209ENST00000613547 FKBP5Q13451 457 aaPredicted RBP16.94■□□□□ 0.3
MDC1-209ENST00000613547 PARP10Q53GL7 1025 aa16.94■□□□□ 0.3
MDC1-209ENST00000613547 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
MDC1-209ENST00000613547 BCORQ6W2J9 1755 aa16.94■□□□□ 0.3
MDC1-209ENST00000613547 KSR2Q6VAB6 950 aa16.93■□□□□ 0.3
MDC1-209ENST00000613547 NBPF5PQ86XG9 351 aaPredicted RBP16.93■□□□□ 0.3
MDC1-209ENST00000613547 GPTP24298 496 aa16.92■□□□□ 0.3
MDC1-209ENST00000613547 GTF2E1P29083 439 aaPredicted RBP16.92■□□□□ 0.3
MDC1-209ENST00000613547 NEXNQ0ZGT2 675 aa16.92■□□□□ 0.3
MDC1-209ENST00000613547 TCIRG1Q13488 830 aa16.92■□□□□ 0.3
MDC1-209ENST00000613547 TPTE2Q6XPS3 522 aa16.92■□□□□ 0.3
MDC1-209ENST00000613547 G2E3Q7L622 706 aa16.92■□□□□ 0.3
MDC1-209ENST00000613547 CNBD1Q8NA66 436 aa16.92■□□□□ 0.3
MDC1-209ENST00000613547 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
MDC1-209ENST00000613547 FHDC1Q9C0D6 1143 aaPredicted RBP16.92■□□□□ 0.3
MDC1-209ENST00000613547 NYXQ9GZU5 481 aa16.92■□□□□ 0.3
MDC1-209ENST00000613547 CD2APQ9Y5K6 639 aa16.92■□□□□ 0.3
MDC1-209ENST00000613547 PI4KAP2A4QPH2 592 aa16.91■□□□□ 0.3
MDC1-209ENST00000613547 ST5P78524 1137 aa16.91■□□□□ 0.3
MDC1-209ENST00000613547 PPP1R42Q7Z4L9 355 aa16.91■□□□□ 0.3
MDC1-209ENST00000613547 ZNF34Q8IZ26 560 aa16.91■□□□□ 0.3
MDC1-209ENST00000613547 PI4KAP1Q8N8J0 262 aa16.91■□□□□ 0.3
MDC1-209ENST00000613547 MAP3K2Q9Y2U5 619 aa16.91■□□□□ 0.3
MDC1-209ENST00000613547 MRPL50Q8N5N7 158 aaKnown RBP16.9■□□□□ 0.3
MDC1-209ENST00000613547 METTL22Q9BUU2 404 aaPredicted RBP16.9■□□□□ 0.3
MDC1-209ENST00000613547 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
MDC1-209ENST00000613547 PTPRCP08575 1304 aa16.9■□□□□ 0.3
MDC1-209ENST00000613547 IBTKQ9P2D0 1353 aaPredicted RBP16.89■□□□□ 0.3
MDC1-209ENST00000613547 C10orf71Q711Q0 1435 aa16.89■□□□□ 0.29
MDC1-209ENST00000613547 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
MDC1-209ENST00000613547 RARSP54136 660 aaKnown RBP16.89■□□□□ 0.29
MDC1-209ENST00000613547 SYT17Q9BSW7 474 aa16.89■□□□□ 0.29
MDC1-209ENST00000613547 RNF123Q5XPI4 1314 aa16.89■□□□□ 0.29
MDC1-209ENST00000613547 UBN2Q6ZU65 1347 aa16.89■□□□□ 0.29
MDC1-209ENST00000613547 KIF16BQ96L93 1317 aa16.89■□□□□ 0.29
MDC1-209ENST00000613547 PRR5LQ6MZQ0 368 aa16.88■□□□□ 0.29
MDC1-209ENST00000613547 NLRP10Q86W26 655 aa16.88■□□□□ 0.29
MDC1-209ENST00000613547 DNAAF4Q8WXU2 420 aa16.88■□□□□ 0.29
MDC1-209ENST00000613547 MYD88Q99836 296 aa16.88■□□□□ 0.29
MDC1-209ENST00000613547 UTP14AQ9BVJ6 771 aaKnown RBP16.88■□□□□ 0.29
MDC1-209ENST00000613547 ADCY9O60503 1353 aa16.88■□□□□ 0.29
MDC1-209ENST00000613547 ATP5J2-PTCD1G3V325 749 aa16.87■□□□□ 0.29
MDC1-209ENST00000613547 TGFB2P61812 414 aa16.87■□□□□ 0.29
MDC1-209ENST00000613547 TRIM28Q13263 835 aaKnown RBP16.87■□□□□ 0.29
MDC1-209ENST00000613547 SUSD4Q5VX71 490 aa16.87■□□□□ 0.29
MDC1-209ENST00000613547 ISCA1Q9BUE6 129 aa16.87■□□□□ 0.29
MDC1-209ENST00000613547 PDE6BP35913 854 aa16.86■□□□□ 0.29
MDC1-209ENST00000613547 BRPF1P55201 1214 aaPredicted RBP16.86■□□□□ 0.29
MDC1-209ENST00000613547 CCDC191Q8NCU4 936 aa16.86■□□□□ 0.29
MDC1-209ENST00000613547 BRIP1Q9BX63 1249 aa16.86■□□□□ 0.29
MDC1-209ENST00000613547 TRMT112Q9UI30 125 aaKnown RBP16.86■□□□□ 0.29
MDC1-209ENST00000613547 NTSR2O95665 410 aa16.85■□□□□ 0.29
MDC1-209ENST00000613547 LINS1Q8NG48 757 aa16.85■□□□□ 0.29
MDC1-209ENST00000613547 CWC25Q9NXE8 425 aaPredicted RBP16.85■□□□□ 0.29
MDC1-209ENST00000613547 PDZRN3Q9UPQ7 1066 aa16.85■□□□□ 0.29
MDC1-209ENST00000613547 IPO8O15397 1037 aaKnown RBP16.84■□□□□ 0.29
MDC1-209ENST00000613547 API5Q9BZZ5 524 aaKnown RBP16.84■□□□□ 0.29
MDC1-209ENST00000613547 SH3TC1Q8TE82 1336 aa16.84■□□□□ 0.29
MDC1-209ENST00000613547 NUP98P52948 1817 aa16.84■□□□□ 0.29
MDC1-209ENST00000613547 SRCAPQ6ZRS2 3230 aa16.83■□□□□ 0.29
MDC1-209ENST00000613547 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms