RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 NLGN1Q8N2Q7 840 aa16.65■□□□□ 0.26
SRGAP2C-204ENST00000613462 AFDNP55196 1824 aaKnown RBP16.64■□□□□ 0.25
SRGAP2C-204ENST00000613462 ERVV-1B6SEH8 477 aa16.64■□□□□ 0.25
SRGAP2C-204ENST00000613462 SMIM5Q71RC9 77 aa16.64■□□□□ 0.25
SRGAP2C-204ENST00000613462 ARXQ96QS3 562 aa16.64■□□□□ 0.25
SRGAP2C-204ENST00000613462 MAP3K15Q6ZN16 1313 aa16.64■□□□□ 0.25
SRGAP2C-204ENST00000613462 CAMTA2O94983 1202 aa16.63■□□□□ 0.25
SRGAP2C-204ENST00000613462 ZBTB7AO95365 584 aa16.63■□□□□ 0.25
SRGAP2C-204ENST00000613462 ANXA1P04083 346 aa16.63■□□□□ 0.25
SRGAP2C-204ENST00000613462 GYS1P13807 737 aa16.63■□□□□ 0.25
SRGAP2C-204ENST00000613462 USPL1Q5W0Q7 1092 aa16.63■□□□□ 0.25
SRGAP2C-204ENST00000613462 CLEC4GQ6UXB4 293 aa16.63■□□□□ 0.25
SRGAP2C-204ENST00000613462 TBC1D2BQ9UPU7 963 aa16.63■□□□□ 0.25
SRGAP2C-204ENST00000613462 NRXN2Q9P2S2 1712 aa16.62■□□□□ 0.25
SRGAP2C-204ENST00000613462 N4BP2Q86UW6 1770 aaPredicted RBP16.62■□□□□ 0.25
SRGAP2C-204ENST00000613462 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
SRGAP2C-204ENST00000613462 DDX58O95786 925 aaKnown RBP16.62■□□□□ 0.25
SRGAP2C-204ENST00000613462 POLD1P28340 1107 aa16.62■□□□□ 0.25
SRGAP2C-204ENST00000613462 ALDH1L2Q3SY69 923 aa16.62■□□□□ 0.25
SRGAP2C-204ENST00000613462 IFFO2Q5TF58 517 aa16.62■□□□□ 0.25
SRGAP2C-204ENST00000613462 COPS6Q7L5N1 327 aa16.62■□□□□ 0.25
SRGAP2C-204ENST00000613462 XAGE3Q8WTP9 111 aa16.62■□□□□ 0.25
SRGAP2C-204ENST00000613462 SGIP1Q9BQI5 828 aa16.62■□□□□ 0.25
SRGAP2C-204ENST00000613462 SRP68Q9UHB9 627 aaKnown RBP16.62■□□□□ 0.25
SRGAP2C-204ENST00000613462 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
SRGAP2C-204ENST00000613462 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
SRGAP2C-204ENST00000613462 C1QTNF8P60827 252 aa16.61■□□□□ 0.25
SRGAP2C-204ENST00000613462 KIF13BQ9NQT8 1826 aa16.61■□□□□ 0.25
SRGAP2C-204ENST00000613462 TTLL7Q6ZT98 887 aa16.6■□□□□ 0.25
SRGAP2C-204ENST00000613462 PLBD2Q8NHP8 589 aa16.6■□□□□ 0.25
SRGAP2C-204ENST00000613462 AIMP1Q12904 312 aaKnown RBP16.59■□□□□ 0.25
SRGAP2C-204ENST00000613462 FKBP8Q14318 412 aa16.59■□□□□ 0.25
SRGAP2C-204ENST00000613462 HSP90AB3PQ58FF7 597 aa16.59■□□□□ 0.25
SRGAP2C-204ENST00000613462 ANKRD13DQ6ZTN6 518 aa16.59■□□□□ 0.25
SRGAP2C-204ENST00000613462 SYT17Q9BSW7 474 aa16.59■□□□□ 0.25
SRGAP2C-204ENST00000613462 BCL2L12Q9HB09 334 aa16.59■□□□□ 0.25
SRGAP2C-204ENST00000613462 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
SRGAP2C-204ENST00000613462 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
SRGAP2C-204ENST00000613462 MSL1Q68DK7 614 aa16.58■□□□□ 0.24
SRGAP2C-204ENST00000613462 GIGYF2Q6Y7W6 1299 aaKnown RBP16.58■□□□□ 0.24
SRGAP2C-204ENST00000613462 ZBTB3Q9H5J0 574 aa16.58■□□□□ 0.24
SRGAP2C-204ENST00000613462 PHAXQ9H814 394 aaKnown RBP16.58■□□□□ 0.24
SRGAP2C-204ENST00000613462 TCERG1O14776 1098 aaKnown RBP16.57■□□□□ 0.24
SRGAP2C-204ENST00000613462 MMP10P09238 476 aa16.57■□□□□ 0.24
SRGAP2C-204ENST00000613462 BRPF1P55201 1214 aaPredicted RBP16.57■□□□□ 0.24
SRGAP2C-204ENST00000613462 FLIIQ13045 1269 aa16.57■□□□□ 0.24
SRGAP2C-204ENST00000613462 SSH1Q8WYL5 1049 aa16.57■□□□□ 0.24
SRGAP2C-204ENST00000613462 SETDB2Q96T68 719 aa16.57■□□□□ 0.24
SRGAP2C-204ENST00000613462 FHDC1Q9C0D6 1143 aaPredicted RBP16.57■□□□□ 0.24
SRGAP2C-204ENST00000613462 SMC4Q9NTJ3 1288 aa16.57■□□□□ 0.24
SRGAP2C-204ENST00000613462 PARP3Q9Y6F1 533 aa16.57■□□□□ 0.24
SRGAP2C-204ENST00000613462 IBTKQ9P2D0 1353 aaPredicted RBP16.56■□□□□ 0.24
SRGAP2C-204ENST00000613462 PTPRCP08575 1304 aa16.56■□□□□ 0.24
SRGAP2C-204ENST00000613462 TM4SF1P30408 202 aa16.56■□□□□ 0.24
SRGAP2C-204ENST00000613462 FKBP5Q13451 457 aaPredicted RBP16.56■□□□□ 0.24
SRGAP2C-204ENST00000613462 NFIXQ14938 502 aa16.56■□□□□ 0.24
SRGAP2C-204ENST00000613462 RIC3Q7Z5B4 369 aa16.56■□□□□ 0.24
SRGAP2C-204ENST00000613462 KIF16BQ96L93 1317 aa16.55■□□□□ 0.24
SRGAP2C-204ENST00000613462 CENPBP07199 599 aaPredicted RBP16.55■□□□□ 0.24
SRGAP2C-204ENST00000613462 RARSP54136 660 aaKnown RBP16.55■□□□□ 0.24
SRGAP2C-204ENST00000613462 HLFQ16534 295 aa16.55■□□□□ 0.24
SRGAP2C-204ENST00000613462 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
SRGAP2C-204ENST00000613462 KSR2Q6VAB6 950 aa16.55■□□□□ 0.24
SRGAP2C-204ENST00000613462 MRPL50Q8N5N7 158 aaKnown RBP16.55■□□□□ 0.24
SRGAP2C-204ENST00000613462 LAMB2P55268 1798 aa16.55■□□□□ 0.24
SRGAP2C-204ENST00000613462 ADCY9O60503 1353 aa16.54■□□□□ 0.24
SRGAP2C-204ENST00000613462 TCIRG1Q13488 830 aa16.54■□□□□ 0.24
SRGAP2C-204ENST00000613462 G2E3Q7L622 706 aa16.54■□□□□ 0.24
SRGAP2C-204ENST00000613462 NIP7Q9Y221 180 aaKnown RBP eCLIP16.54■□□□□ 0.24
SRGAP2C-204ENST00000613462 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
SRGAP2C-204ENST00000613462 ANKRD31Q8N7Z5 1873 aa16.53■□□□□ 0.24
SRGAP2C-204ENST00000613462 POLRMTO00411 1230 aaKnown RBP16.53■□□□□ 0.24
SRGAP2C-204ENST00000613462 DDR1Q08345 913 aa16.53■□□□□ 0.24
SRGAP2C-204ENST00000613462 NEXNQ0ZGT2 675 aa16.53■□□□□ 0.24
SRGAP2C-204ENST00000613462 PARP10Q53GL7 1025 aa16.53■□□□□ 0.24
SRGAP2C-204ENST00000613462 ZNF34Q8IZ26 560 aa16.53■□□□□ 0.24
SRGAP2C-204ENST00000613462 MAP3K2Q9Y2U5 619 aa16.53■□□□□ 0.24
SRGAP2C-204ENST00000613462 DLEC1Q9Y238 1755 aa16.53■□□□□ 0.24
SRGAP2C-204ENST00000613462 MYH3P11055 1940 aa16.53■□□□□ 0.24
SRGAP2C-204ENST00000613462 RNF123Q5XPI4 1314 aa16.52■□□□□ 0.24
SRGAP2C-204ENST00000613462 PI4KAP2A4QPH2 592 aa16.52■□□□□ 0.24
SRGAP2C-204ENST00000613462 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.24
SRGAP2C-204ENST00000613462 PI4KAP1Q8N8J0 262 aa16.52■□□□□ 0.24
SRGAP2C-204ENST00000613462 METTL22Q9BUU2 404 aaPredicted RBP16.52■□□□□ 0.24
SRGAP2C-204ENST00000613462 BCL2L13Q9BXK5 485 aa16.52■□□□□ 0.24
SRGAP2C-204ENST00000613462 NYXQ9GZU5 481 aa16.52■□□□□ 0.24
SRGAP2C-204ENST00000613462 C10orf71Q711Q0 1435 aa16.52■□□□□ 0.23
SRGAP2C-204ENST00000613462 TRIM28Q13263 835 aaKnown RBP16.51■□□□□ 0.23
SRGAP2C-204ENST00000613462 PPP1R42Q7Z4L9 355 aa16.51■□□□□ 0.23
SRGAP2C-204ENST00000613462 DNAAF4Q8WXU2 420 aa16.51■□□□□ 0.23
SRGAP2C-204ENST00000613462 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
SRGAP2C-204ENST00000613462 SERPINB2P05120 415 aa16.5■□□□□ 0.23
SRGAP2C-204ENST00000613462 TPTE2Q6XPS3 522 aa16.5■□□□□ 0.23
SRGAP2C-204ENST00000613462 NBPF5PQ86XG9 351 aaPredicted RBP16.5■□□□□ 0.23
SRGAP2C-204ENST00000613462 CNBD1Q8NA66 436 aa16.5■□□□□ 0.23
SRGAP2C-204ENST00000613462 ARHGAP45Q92619 1136 aa16.5■□□□□ 0.23
SRGAP2C-204ENST00000613462 ISCA1Q9BUE6 129 aa16.5■□□□□ 0.23
SRGAP2C-204ENST00000613462 DDX60Q8IY21 1712 aaKnown RBP16.5■□□□□ 0.23
SRGAP2C-204ENST00000613462 KIAA1551Q9HCM1 1747 aa16.5■□□□□ 0.23
SRGAP2C-204ENST00000613462 UBN2Q6ZU65 1347 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms