RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 CCDC87Q9NVE4 849 aa25.54■■□□□ 1.68
CPNE9-205ENST00000613455 KDM2BQ8NHM5 1336 aa25.53■■□□□ 1.68
CPNE9-205ENST00000613455 METTL22Q9BUU2 404 aaPredicted RBP25.53■■□□□ 1.68
CPNE9-205ENST00000613455 C1orf115Q9H7X2 142 aa25.53■■□□□ 1.68
CPNE9-205ENST00000613455 IL6STP40189 918 aaPredicted RBP25.52■■□□□ 1.68
CPNE9-205ENST00000613455 ZNF330Q9Y3S2 320 aaPredicted RBP25.52■■□□□ 1.68
CPNE9-205ENST00000613455 CCNL1Q9UK58 526 aaPredicted RBP25.51■■□□□ 1.68
CPNE9-205ENST00000613455 AFDNP55196 1824 aaKnown RBP25.51■■□□□ 1.67
CPNE9-205ENST00000613455 IGKV5-2P06315 115 aa25.51■■□□□ 1.67
CPNE9-205ENST00000613455 LINS1Q8NG48 757 aa25.51■■□□□ 1.67
CPNE9-205ENST00000613455 USP44Q9H0E7 712 aa25.51■■□□□ 1.67
CPNE9-205ENST00000613455 ALDH1L1O75891 902 aa25.5■■□□□ 1.67
CPNE9-205ENST00000613455 IGHDP01880 384 aa25.5■■□□□ 1.67
CPNE9-205ENST00000613455 CWF19L2Q2TBE0 894 aaKnown RBP25.5■■□□□ 1.67
CPNE9-205ENST00000613455 CNTNAP4Q9C0A0 1308 aa25.5■■□□□ 1.67
CPNE9-205ENST00000613455 TNS1Q9HBL0 1735 aaKnown RBP25.5■■□□□ 1.67
CPNE9-205ENST00000613455 IBTKQ9P2D0 1353 aaPredicted RBP25.5■■□□□ 1.67
CPNE9-205ENST00000613455 EIF5P55010 431 aaKnown RBP25.49■■□□□ 1.67
CPNE9-205ENST00000613455 MYD88Q99836 296 aa25.49■■□□□ 1.67
CPNE9-205ENST00000613455 ZBTB3Q9H5J0 574 aa25.49■■□□□ 1.67
CPNE9-205ENST00000613455 NEXNQ0ZGT2 675 aa25.48■■□□□ 1.67
CPNE9-205ENST00000613455 C4BP0C0L5 1744 aa25.47■■□□□ 1.67
CPNE9-205ENST00000613455 NEURL1BA8MQ27 555 aa25.47■■□□□ 1.67
CPNE9-205ENST00000613455 GNAI3P08754 354 aa25.47■■□□□ 1.67
CPNE9-205ENST00000613455 KIF6Q6ZMV9 814 aa25.46■■□□□ 1.67
CPNE9-205ENST00000613455 CENPQQ7L2Z9 268 aaPredicted RBP25.46■■□□□ 1.67
CPNE9-205ENST00000613455 MAP3K15Q6ZN16 1313 aa25.46■■□□□ 1.67
CPNE9-205ENST00000613455 LRRC4BQ9NT99 713 aa25.46■■□□□ 1.67
CPNE9-205ENST00000613455 HDAC1Q13547 482 aaPredicted RBP25.45■■□□□ 1.66
CPNE9-205ENST00000613455 RC3H1Q5TC82 1133 aaKnown RBP25.45■■□□□ 1.66
CPNE9-205ENST00000613455 NUP98P52948 1817 aa25.44■■□□□ 1.66
CPNE9-205ENST00000613455 ANKRD36CQ5JPF3 1778 aa25.44■■□□□ 1.66
CPNE9-205ENST00000613455 COL15A1P39059 1388 aa25.44■■□□□ 1.66
CPNE9-205ENST00000613455 NBPF7P0C2Y1 421 aaPredicted RBP25.44■■□□□ 1.66
CPNE9-205ENST00000613455 SIRT2Q8IXJ6 389 aa25.44■■□□□ 1.66
CPNE9-205ENST00000613455 GNAI2P04899 355 aa25.43■■□□□ 1.66
CPNE9-205ENST00000613455 UBTFL1P0CB47 393 aaPredicted RBP25.43■■□□□ 1.66
CPNE9-205ENST00000613455 BCORQ6W2J9 1755 aa25.43■■□□□ 1.66
CPNE9-205ENST00000613455 ATP5J2-PTCD1G3V325 749 aa25.43■■□□□ 1.66
CPNE9-205ENST00000613455 CEP85Q6P2H3 762 aa25.43■■□□□ 1.66
CPNE9-205ENST00000613455 DZIP3Q86Y13 1208 aaKnown RBP25.43■■□□□ 1.66
CPNE9-205ENST00000613455 RWDD1Q9H446 243 aaPredicted RBP25.43■■□□□ 1.66
CPNE9-205ENST00000613455 UTYO14607 1347 aa25.42■■□□□ 1.66
CPNE9-205ENST00000613455 GCKRQ14397 625 aa25.42■■□□□ 1.66
CPNE9-205ENST00000613455 HLFQ16534 295 aa25.41■■□□□ 1.66
CPNE9-205ENST00000613455 SLC27A3Q5K4L6 730 aa25.41■■□□□ 1.66
CPNE9-205ENST00000613455 NPM2Q86SE8 214 aaKnown RBP25.41■■□□□ 1.66
CPNE9-205ENST00000613455 ARXQ96QS3 562 aa25.41■■□□□ 1.66
CPNE9-205ENST00000613455 TBC1D2BQ9UPU7 963 aa25.41■■□□□ 1.66
CPNE9-205ENST00000613455 LRRFIP2Q9Y608 721 aaKnown RBP25.41■■□□□ 1.66
CPNE9-205ENST00000613455 RGPD3A6NKT7 1758 aaPredicted RBP25.4■■□□□ 1.66
CPNE9-205ENST00000613455 RGPD4Q7Z3J3 1758 aa25.4■■□□□ 1.66
CPNE9-205ENST00000613455 ERVV-1B6SEH8 477 aa25.4■■□□□ 1.66
CPNE9-205ENST00000613455 GRM8O00222 908 aa25.4■■□□□ 1.66
CPNE9-205ENST00000613455 GIGYF2Q6Y7W6 1299 aaKnown RBP25.4■■□□□ 1.66
CPNE9-205ENST00000613455 ANKRD44Q8N8A2 993 aa25.4■■□□□ 1.66
CPNE9-205ENST00000613455 C9orf78Q9NZ63 289 aaPredicted RBP25.4■■□□□ 1.66
CPNE9-205ENST00000613455 TCIRG1Q13488 830 aa25.4■■□□□ 1.66
CPNE9-205ENST00000613455 PLSCR1O15162 318 aa25.39■■□□□ 1.65
CPNE9-205ENST00000613455 PROM2Q8N271 834 aa25.39■■□□□ 1.65
CPNE9-205ENST00000613455 ISCA1Q9BUE6 129 aa25.39■■□□□ 1.65
CPNE9-205ENST00000613455 SCN7AQ01118 1682 aa25.39■■□□□ 1.65
CPNE9-205ENST00000613455 APBA3O96018 575 aa25.38■■□□□ 1.65
CPNE9-205ENST00000613455 RPAP2Q8IXW5 612 aaPredicted RBP25.38■■□□□ 1.65
CPNE9-205ENST00000613455 GNPATO15228 680 aa25.37■■□□□ 1.65
CPNE9-205ENST00000613455 RPS6KA4O75676 772 aa25.37■■□□□ 1.65
CPNE9-205ENST00000613455 CAMTA2O94983 1202 aa25.37■■□□□ 1.65
CPNE9-205ENST00000613455 UBR3Q6ZT12 1888 aa25.37■■□□□ 1.65
CPNE9-205ENST00000613455 TXNRD1Q16881 649 aa25.37■■□□□ 1.65
CPNE9-205ENST00000613455 AMIGO3Q86WK7 504 aa25.37■■□□□ 1.65
CPNE9-205ENST00000613455 C4AP0C0L4 1744 aa25.37■■□□□ 1.65
CPNE9-205ENST00000613455 TRIM28Q13263 835 aaKnown RBP25.36■■□□□ 1.65
CPNE9-205ENST00000613455 CCDC191Q8NCU4 936 aa25.36■■□□□ 1.65
CPNE9-205ENST00000613455 CWC25Q9NXE8 425 aaPredicted RBP25.36■■□□□ 1.65
CPNE9-205ENST00000613455 SMIM5Q71RC9 77 aa25.35■■□□□ 1.65
CPNE9-205ENST00000613455 A0A087WZG4 1122 aa25.34■■□□□ 1.65
CPNE9-205ENST00000613455 HSP90AB3PQ58FF7 597 aa25.34■■□□□ 1.65
CPNE9-205ENST00000613455 CASP7P55210 303 aa25.34■■□□□ 1.65
CPNE9-205ENST00000613455 SMC5Q8IY18 1101 aa25.34■■□□□ 1.65
CPNE9-205ENST00000613455 KAZALD1Q96I82 304 aa25.34■■□□□ 1.65
CPNE9-205ENST00000613455 SUCLG2Q96I99 432 aa25.34■■□□□ 1.65
CPNE9-205ENST00000613455 RTCBQ9Y3I0 505 aaKnown RBP25.34■■□□□ 1.65
CPNE9-205ENST00000613455 UBE3BQ7Z3V4 1068 aa25.32■■□□□ 1.64
CPNE9-205ENST00000613455 AK7Q96M32 723 aa25.32■■□□□ 1.64
CPNE9-205ENST00000613455 PNMA6EA0A0J9YXQ4 647 aa25.32■■□□□ 1.64
CPNE9-205ENST00000613455 H7C1W4 665 aa25.32■■□□□ 1.64
CPNE9-205ENST00000613455 ATP8B2P98198 1209 aa25.32■■□□□ 1.64
CPNE9-205ENST00000613455 JARID2Q92833 1246 aaPredicted RBP25.32■■□□□ 1.64
CPNE9-205ENST00000613455 GPTP24298 496 aa25.31■■□□□ 1.64
CPNE9-205ENST00000613455 ZNF34Q8IZ26 560 aa25.31■■□□□ 1.64
CPNE9-205ENST00000613455 HDAC5Q9UQL6 1122 aa25.31■■□□□ 1.64
CPNE9-205ENST00000613455 UBN2Q6ZU65 1347 aa25.31■■□□□ 1.64
CPNE9-205ENST00000613455 NLRP10Q86W26 655 aa25.3■■□□□ 1.64
CPNE9-205ENST00000613455 MTX1Q13505 466 aa25.29■■□□□ 1.64
CPNE9-205ENST00000613455 SKAP1Q86WV1 359 aa25.29■■□□□ 1.64
CPNE9-205ENST00000613455 HMMRO75330 724 aa25.29■■□□□ 1.64
CPNE9-205ENST00000613455 BICC1Q9H694 974 aaKnown RBP25.29■■□□□ 1.64
CPNE9-205ENST00000613455 NARFQ9UHQ1 456 aa25.29■■□□□ 1.64
CPNE9-205ENST00000613455 RGL2O15211 777 aa25.28■■□□□ 1.64
CPNE9-205ENST00000613455 EPHA10Q5JZY3 1008 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms